BLASTX nr result

ID: Coptis24_contig00022494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022494
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE03274.1| OSJNBa0011J08.29 [Oryza sativa Japonica Group] g...   144   1e-32
emb|CAH66381.1| OSIGBa0092E09.8 [Oryza sativa Indica Group]           142   4e-32
gb|ABA97777.1| transposon protein, putative, unclassified [Oryza...   141   5e-32
emb|CAE02960.2| OSJNBb0050N09.11 [Oryza sativa Japonica Group]        141   5e-32
emb|CAE04259.3| OSJNBa0089N06.20 [Oryza sativa Japonica Group]        141   5e-32

>emb|CAE03274.1| OSJNBa0011J08.29 [Oryza sativa Japonica Group]
            gi|38345864|emb|CAE01833.2| OSJNBa0064M23.6 [Oryza sativa
            Japonica Group]
          Length = 1148

 Score =  144 bits (362), Expect = 1e-32
 Identities = 70/92 (76%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3    ELNDIWELVDLPEGQKTVENK*LFKTKYDSQGKIDKHKARLVAKGFTQQEGVDYNETFSP 182
            +LND+W+L ++P+G KTV  K ++KTKYDS+G I+K KARLVAKGFTQ+EG+DYNETFSP
Sbjct: 793  KLNDVWDLEEIPKGAKTVGCKWVYKTKYDSRGNIEKFKARLVAKGFTQREGIDYNETFSP 852

Query: 183  VS-KDSLRIIMALVAHFDLELHQMDVKMAFLN 275
            VS KDS RIIMALVAH+DLELHQMDVKMAFLN
Sbjct: 853  VSCKDSFRIIMALVAHYDLELHQMDVKMAFLN 884


>emb|CAH66381.1| OSIGBa0092E09.8 [Oryza sativa Indica Group]
          Length = 1280

 Score =  142 bits (357), Expect = 4e-32
 Identities = 69/92 (75%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3    ELNDIWELVDLPEGQKTVENK*LFKTKYDSQGKIDKHKARLVAKGFTQQEGVDYNETFSP 182
            +LND+W+L ++P+G KTV  K ++KTKYDS+G I+K KARLVAKGFTQ+EG+DYNETFSP
Sbjct: 788  KLNDVWDLEEIPKGAKTVGYKWVYKTKYDSRGNIEKFKARLVAKGFTQREGIDYNETFSP 847

Query: 183  VS-KDSLRIIMALVAHFDLELHQMDVKMAFLN 275
            VS KDS RIIMALVAH+DLELHQMDVK AFLN
Sbjct: 848  VSCKDSFRIIMALVAHYDLELHQMDVKTAFLN 879


>gb|ABA97777.1| transposon protein, putative, unclassified [Oryza sativa Japonica
            Group]
          Length = 1378

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/92 (75%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3    ELNDIWELVDLPEGQKTVENK*LFKTKYDSQGKIDKHKARLVAKGFTQQEGVDYNETFSP 182
            +LND+W+L ++P+G KTV  K ++KTKYDS+G I+K KARLVAKGFTQ+EG+DYNETFSP
Sbjct: 899  KLNDVWDLEEIPKGAKTVGCKWVYKTKYDSRGNIEKFKARLVAKGFTQREGIDYNETFSP 958

Query: 183  VS-KDSLRIIMALVAHFDLELHQMDVKMAFLN 275
            VS KDS RIIMALVAH+DLELHQMDVK AFLN
Sbjct: 959  VSCKDSFRIIMALVAHYDLELHQMDVKTAFLN 990


>emb|CAE02960.2| OSJNBb0050N09.11 [Oryza sativa Japonica Group]
          Length = 1405

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/92 (75%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3    ELNDIWELVDLPEGQKTVENK*LFKTKYDSQGKIDKHKARLVAKGFTQQEGVDYNETFSP 182
            +LND+W+L ++P+G KTV  K ++KTKYDS+G I+K KARLVAKGFTQ+EG+DYNETFSP
Sbjct: 913  KLNDVWDLEEIPKGAKTVGCKWVYKTKYDSRGNIEKFKARLVAKGFTQREGIDYNETFSP 972

Query: 183  VS-KDSLRIIMALVAHFDLELHQMDVKMAFLN 275
            VS KDS RIIMALVAH+DLELHQMDVK AFLN
Sbjct: 973  VSCKDSFRIIMALVAHYDLELHQMDVKTAFLN 1004


>emb|CAE04259.3| OSJNBa0089N06.20 [Oryza sativa Japonica Group]
          Length = 1405

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/92 (75%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3    ELNDIWELVDLPEGQKTVENK*LFKTKYDSQGKIDKHKARLVAKGFTQQEGVDYNETFSP 182
            +LND+W+L ++P+G KTV  K ++KTKYDS+G I+K KARLVAKGFTQ+EG+DYNETFSP
Sbjct: 913  KLNDVWDLEEIPKGAKTVGCKWVYKTKYDSRGNIEKFKARLVAKGFTQREGIDYNETFSP 972

Query: 183  VS-KDSLRIIMALVAHFDLELHQMDVKMAFLN 275
            VS KDS RIIMALVAH+DLELHQMDVK AFLN
Sbjct: 973  VSCKDSFRIIMALVAHYDLELHQMDVKTAFLN 1004


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