BLASTX nr result

ID: Coptis24_contig00022469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022469
         (813 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63016.1| hypothetical protein VITISV_017409 [Vitis vinifera]   113   4e-23
emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]   112   1e-22
emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]   109   8e-22
emb|CAN76619.1| hypothetical protein VITISV_038356 [Vitis vinifera]   109   8e-22
emb|CAN77369.1| hypothetical protein VITISV_033118 [Vitis vinifera]   108   1e-21

>emb|CAN63016.1| hypothetical protein VITISV_017409 [Vitis vinifera]
          Length = 873

 Score =  113 bits (283), Expect = 4e-23
 Identities = 56/119 (47%), Positives = 74/119 (62%), Gaps = 5/119 (4%)
 Frame = -3

Query: 343 EIFMMTSSVGCTTDNFPSRYLGLPLGASYRSISIWDTVIERFSCRLAGWKGRF*SMGDRV 164
           E+    +  GC   N P+ YLGLPLGAS++S  +WD V ERF  +LA WK ++ S G R+
Sbjct: 423 EVDRAAAVFGCKVGNLPTNYLGLPLGASHKSCRVWDGVEERFKRKLAMWKKQYLSKGGRL 482

Query: 163 ILIKNIFSSLLVYYM-----PSSVANRLESIIRDFLWDDSEDRHRFHLVRWERVCMSRR 2
            LIK+  S+L +Y+M     P  V  RLE I R+FLW D E+R + HLVRWE +C   R
Sbjct: 483 TLIKSTLSNLPIYFMSLFVIPRKVRLRLEKIQREFLWGDMEERRKIHLVRWEVICKDMR 541


>emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]
          Length = 1201

 Score =  112 bits (280), Expect = 1e-22
 Identities = 56/119 (47%), Positives = 73/119 (61%), Gaps = 5/119 (4%)
 Frame = -3

Query: 343  EIFMMTSSVGCTTDNFPSRYLGLPLGASYRSISIWDTVIERFSCRLAGWKGRF*SMGDRV 164
            E+    +  GC   N P+ YLGLPLGAS++S  +WD V ERF  +LA WK ++ S G R+
Sbjct: 720  EVDRAAAVFGCKVGNLPTNYLGLPLGASHKSCRVWDGVEERFKRKLAMWKKQYLSKGGRL 779

Query: 163  ILIKNIFSSLLVYYM-----PSSVANRLESIIRDFLWDDSEDRHRFHLVRWERVCMSRR 2
             LIK+  S+L +Y+M     P  V  RLE I R+FLW D E+R + HLVRWE  C   R
Sbjct: 780  TLIKSTLSNLPIYFMSLFVIPRKVRLRLEKIQREFLWGDMEERRKIHLVRWEVTCKDMR 838


>emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]
          Length = 1848

 Score =  109 bits (272), Expect = 8e-22
 Identities = 54/110 (49%), Positives = 72/110 (65%), Gaps = 5/110 (4%)
 Frame = -3

Query: 316  GCTTDNFPSRYLGLPLGASYRSISIWDTVIERFSCRLAGWKGRF*SMGDRVILIKNIFSS 137
            GC   + PS YLGLPLGA ++S+++WD V ERF  RL  WK ++ S G R  LI++  S+
Sbjct: 1378 GCKVGSLPSTYLGLPLGAPFKSVAMWDGVEERFRKRLTMWKRQYLSKGGRATLIRSTLSN 1437

Query: 136  LLVYYM-----PSSVANRLESIIRDFLWDDSEDRHRFHLVRWERVCMSRR 2
            L +YYM     PSSV +RLE I RDFLW       + HLVRW+ VC+S++
Sbjct: 1438 LPIYYMSVLRLPSSVRSRLEQIQRDFLWGGGSLERKPHLVRWKVVCLSKK 1487


>emb|CAN76619.1| hypothetical protein VITISV_038356 [Vitis vinifera]
          Length = 506

 Score =  109 bits (272), Expect = 8e-22
 Identities = 50/102 (49%), Positives = 68/102 (66%), Gaps = 5/102 (4%)
 Frame = -3

Query: 316 GCTTDNFPSRYLGLPLGASYRSISIWDTVIERFSCRLAGWKGRF*SMGDRVILIKNIFSS 137
           GC    FP+ YLGLPLGA +RSI +WD + ERF  +LA WK ++ S   R++LIK+  SS
Sbjct: 298 GCKVRRFPTSYLGLPLGAPHRSIGVWDVIKERFKRKLAAWKKQYLSTRGRLVLIKSTLSS 357

Query: 136 LLVYYM-----PSSVANRLESIIRDFLWDDSEDRHRFHLVRW 26
           L +Y+M     P  V  RLE I R+F W+D+++R +FHLV W
Sbjct: 358 LXIYFMWLFVIPKKVRTRLERIQRNFFWEDTKERRKFHLVNW 399


>emb|CAN77369.1| hypothetical protein VITISV_033118 [Vitis vinifera]
          Length = 861

 Score =  108 bits (270), Expect = 1e-21
 Identities = 54/110 (49%), Positives = 71/110 (64%), Gaps = 5/110 (4%)
 Frame = -3

Query: 316 GCTTDNFPSRYLGLPLGASYRSISIWDTVIERFSCRLAGWKGRF*SMGDRVILIKNIFSS 137
           GC   + PS YLGLPLGA ++S+S+WD V E F  R+A WK ++ S G R  LI++  S+
Sbjct: 559 GCRVGSLPSTYLGLPLGAPFKSVSMWDGVEEHFRKRVAMWKRQYLSKGGRATLIRSTLSN 618

Query: 136 LLVYYM-----PSSVANRLESIIRDFLWDDSEDRHRFHLVRWERVCMSRR 2
           L +Y+M     PSSV  RLE I RDFLW       + HLVRWE VC+S++
Sbjct: 619 LPIYFMSLLRLPSSVRRRLEQIQRDFLWGGGNLERKPHLVRWEVVCLSKK 668


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