BLASTX nr result
ID: Coptis24_contig00022458
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00022458
(1728 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002323859.1| condensin complex components subunit [Populu... 788 0.0
ref|XP_003633856.1| PREDICTED: structural maintenance of chromos... 781 0.0
ref|XP_002534418.1| Structural maintenance of chromosome, putati... 776 0.0
emb|CBI22212.3| unnamed protein product [Vitis vinifera] 775 0.0
ref|NP_001190492.1| structural maintenance of chromosomes protei... 771 0.0
>ref|XP_002323859.1| condensin complex components subunit [Populus trichocarpa]
gi|222866861|gb|EEF03992.1| condensin complex components
subunit [Populus trichocarpa]
Length = 1256
Score = 788 bits (2034), Expect = 0.0
Identities = 401/534 (75%), Positives = 457/534 (85%), Gaps = 6/534 (1%)
Frame = +2
Query: 2 VSGETVANAEKELAKLVDQLNGLRQRIAGAIRQYQASEKTMADLKMDSAKRQKEIHSLNE 181
VSGE V +AEKEL+ +VD+LNG+RQRIA +++ YQASEK +A L+M+ AK QKEI SLN
Sbjct: 723 VSGEAVTSAEKELSTMVDRLNGIRQRIADSVKHYQASEKAIAHLEMELAKSQKEIDSLNT 782
Query: 182 QHNYIEKQLDSLKAASQPRKDELDRLVELKETIATEEKELERLRNGSVKLKEKASGLQSK 361
+H+Y+EKQL SLKAAS+P+KDELDRL ELK I TEEKE++RL GS KLKEKA LQSK
Sbjct: 783 EHSYLEKQLGSLKAASEPKKDELDRLEELKRIIVTEEKEIDRLIQGSKKLKEKALELQSK 842
Query: 362 IENAGGEKLKRQKAKVNKIQSDIDKNNTEINRCKVLIVTADKMIKKLTKGIEEAKKEKER 541
IENAGGE+LK QKAKVN+IQSD+DKN+TEINR KV I T KMIKKLTKGIE+++KEKER
Sbjct: 843 IENAGGERLKSQKAKVNRIQSDMDKNSTEINRHKVQIETGHKMIKKLTKGIEDSRKEKER 902
Query: 542 FLAEKENLLSVFKEIEHRAFRVQDNYNKTQKLIDEHKDVLDGAKEEYHSLKKTMDQMRAS 721
E+E L +FKEIE +AF VQ+NY KTQ+LID+HK+VLD AK EY +KK +D++RAS
Sbjct: 903 LTEEREKLRGIFKEIEEKAFAVQENYKKTQELIDQHKEVLDKAKSEYEKVKKIVDELRAS 962
Query: 722 EVDADYKLQDMRKLCKEWEMKGKAYXXXXXXXXXXXXXHMQQIQKDAVDPEKLQATLGDL 901
EVDADY+LQDM+K KE E+KGK Y HM+Q QK+ DPEKLQATL D
Sbjct: 963 EVDADYRLQDMKKSYKELELKGKGYKKKLDDLQNALLHHMEQTQKELEDPEKLQATLADK 1022
Query: 902 TLRESCELKKSLEMVALLEAQLKELNPNLDSISEYRKKASLYSDRVEELNMVTQERDDLK 1081
TL E+C+LK++LE V LLEAQLK++NPNLDSISEYR+K S Y++RVEELN+VTQ+RDD+K
Sbjct: 1023 TLAEACDLKRALERVVLLEAQLKDMNPNLDSISEYRRKVSSYNERVEELNLVTQQRDDIK 1082
Query: 1082 KHYDELRKKR------LDEFMAGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVV 1243
+ YDE RKKR LDEFMAGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVV
Sbjct: 1083 RQYDEWRKKRLVFSFLLDEFMAGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVV 1142
Query: 1244 FSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGH 1423
FSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGH
Sbjct: 1143 FSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGH 1202
Query: 1424 YVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFAICENAA 1585
YVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSF +C+NAA
Sbjct: 1203 YVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCQNAA 1256
>ref|XP_003633856.1| PREDICTED: structural maintenance of chromosomes protein 4-like
[Vitis vinifera]
Length = 1486
Score = 781 bits (2016), Expect = 0.0
Identities = 398/528 (75%), Positives = 453/528 (85%)
Frame = +2
Query: 2 VSGETVANAEKELAKLVDQLNGLRQRIAGAIRQYQASEKTMADLKMDSAKRQKEIHSLNE 181
VS E+VA A+ EL+ +VD+LN +RQ++ A+R YQASEK +A L+M+ K KEI SL
Sbjct: 959 VSAESVATAKNELSAMVDKLNSMRQKVVDAVRIYQASEKAVARLEMELTKIHKEIDSLKS 1018
Query: 182 QHNYIEKQLDSLKAASQPRKDELDRLVELKETIATEEKELERLRNGSVKLKEKASGLQSK 361
QH+Y+EKQLDSLKAAS+PRKDEL+RL L +TI+ E+KE+ERL GS +LK+KA LQSK
Sbjct: 1019 QHSYLEKQLDSLKAASKPRKDELNRLEVLNKTISAEKKEIERLIEGSKQLKDKALELQSK 1078
Query: 362 IENAGGEKLKRQKAKVNKIQSDIDKNNTEINRCKVLIVTADKMIKKLTKGIEEAKKEKER 541
IENAGGE+LK QK+KVNKIQ DIDK+NTEINR KV I T KM+KKL KGIEE+KKEK+R
Sbjct: 1079 IENAGGERLKLQKSKVNKIQFDIDKSNTEINRHKVQIETGQKMMKKLKKGIEESKKEKDR 1138
Query: 542 FLAEKENLLSVFKEIEHRAFRVQDNYNKTQKLIDEHKDVLDGAKEEYHSLKKTMDQMRAS 721
+ EKE L K+IE +AF VQDNYNKTQ+LID+HKDVLD AK +Y LKKT+D++RAS
Sbjct: 1139 VVDEKEKLHLSHKDIEQKAFSVQDNYNKTQELIDQHKDVLDKAKSDYEKLKKTVDELRAS 1198
Query: 722 EVDADYKLQDMRKLCKEWEMKGKAYXXXXXXXXXXXXXHMQQIQKDAVDPEKLQATLGDL 901
EVD DYKLQDM+KL KE EMKGK Y HM+QIQKD VDPEKLQATL D
Sbjct: 1199 EVDVDYKLQDMKKLYKELEMKGKGYKRKLEELQVALVKHMEQIQKDLVDPEKLQATLADK 1258
Query: 902 TLRESCELKKSLEMVALLEAQLKELNPNLDSISEYRKKASLYSDRVEELNMVTQERDDLK 1081
TL E C LK++LEMVAL+EAQLKE+NPNLDSISEYR+K S+Y++RV++LNMVTQERDD+K
Sbjct: 1259 TLTEDCGLKRALEMVALIEAQLKEMNPNLDSISEYRRKVSVYNERVQDLNMVTQERDDVK 1318
Query: 1082 KHYDELRKKRLDEFMAGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPP 1261
K YDE +K+R+DEFMAGF+TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPP
Sbjct: 1319 KQYDEWKKRRMDEFMAGFHTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPP 1378
Query: 1262 KKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRT 1441
KKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRT
Sbjct: 1379 KKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRT 1438
Query: 1442 KDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFAICENAA 1585
KDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSF +CE AA
Sbjct: 1439 KDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCEKAA 1486
>ref|XP_002534418.1| Structural maintenance of chromosome, putative [Ricinus communis]
gi|223525329|gb|EEF27966.1| Structural maintenance of
chromosome, putative [Ricinus communis]
Length = 1259
Score = 776 bits (2003), Expect = 0.0
Identities = 401/542 (73%), Positives = 455/542 (83%), Gaps = 14/542 (2%)
Frame = +2
Query: 2 VSGETVANAEKELAKLVDQLNGLRQRIAGAIRQYQASEKTMADLKMDSAKRQKEIHSLNE 181
VS E VANAEKEL+ +V +LN +RQ+I A+R YQASEK + ++M+ AK QKEI SLN
Sbjct: 718 VSAEVVANAEKELSTMVGKLNDIRQKIIDAVRSYQASEKAITHMEMELAKSQKEIDSLNS 777
Query: 182 QHNYIEKQLDSLKAASQPRKDELDRLVELKETIATEEKELERLRNGSVKLKEKASGLQSK 361
+H+Y+EKQL SL+AASQP+KDELDRL ELK+ I++EE E++RL GS KLKEKA LQ+K
Sbjct: 778 EHSYLEKQLGSLEAASQPKKDELDRLKELKKIISSEEMEIDRLTQGSKKLKEKALELQNK 837
Query: 362 IENAGGEKLKRQKAKVNKIQSDIDKNNTEINRCKVLIVTADKMIKKLTKGIEEAKKEKER 541
IENAGGE LK QKAKV KIQS+IDK +TEINR KV I T KMIKKLTKGIE++KKEK+R
Sbjct: 838 IENAGGETLKAQKAKVKKIQSEIDKTSTEINRQKVQIETNQKMIKKLTKGIEDSKKEKDR 897
Query: 542 FLAEKENLLSVFKEIEHRAFRVQDNYNKTQKLIDEHKDVLDGAKEEYHSLKKTMDQMRAS 721
F+ EKE L SVFKEIE +AF VQ+NY KTQ+LID+HK+VLD AK EY ++KK +D++RAS
Sbjct: 898 FVEEKEKLKSVFKEIEEKAFAVQENYKKTQQLIDQHKEVLDKAKSEYENVKKIVDELRAS 957
Query: 722 EVDADYKLQDMRKLCKEWEMKGKAYXXXXXXXXXXXXXHMQQIQKDAVDPEKLQATLGDL 901
EVDADYKLQDM+K KE E+KGK Y HM+QIQKD VDPEKLQATL D
Sbjct: 958 EVDADYKLQDMKKCYKELELKGKGYKKKLDDLQNALTHHMEQIQKDLVDPEKLQATLADE 1017
Query: 902 TLRESCELKKSLEMVALLEAQLKELNPNLDSISEYRKKASLYSDRVEELNMVTQERDDLK 1081
TL ++C+L++++E VALLEAQLKE+NPNL+SISEYR K SLY+ RVEELN VTQ+RDD+K
Sbjct: 1018 TLAKACDLRRAMETVALLEAQLKEMNPNLESISEYRGKVSLYNGRVEELNTVTQQRDDIK 1077
Query: 1082 KHYDELRKKR--------------LDEFMAGFNTISLKLKEMYQMITLGGDAELELVDSL 1219
K +DE RKKR LDEFMAGFNTISLKLKEMYQMITLGGDAELELVDSL
Sbjct: 1078 KQHDEWRKKRQDYCHLYTLVMLLMLDEFMAGFNTISLKLKEMYQMITLGGDAELELVDSL 1137
Query: 1220 DPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDF 1399
DPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDF
Sbjct: 1138 DPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDF 1197
Query: 1400 KNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFAICEN 1579
KNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSF +C N
Sbjct: 1198 KNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCGN 1257
Query: 1580 AA 1585
AA
Sbjct: 1258 AA 1259
>emb|CBI22212.3| unnamed protein product [Vitis vinifera]
Length = 1253
Score = 775 bits (2001), Expect = 0.0
Identities = 399/534 (74%), Positives = 453/534 (84%), Gaps = 6/534 (1%)
Frame = +2
Query: 2 VSGETVANAEKELAKLVDQLNGLRQRIAGAIRQYQASEKTMADLKMDSAKRQKEIHSLNE 181
VS E+VA A+ EL+ +VD+LN +RQ++ A+R YQASEK +A L+M+ K KEI SL
Sbjct: 720 VSAESVATAKNELSAMVDKLNSMRQKVVDAVRIYQASEKAVARLEMELTKIHKEIDSLKS 779
Query: 182 QHNYIEKQLDSLKAASQPRKDELDRLVELKETIATEEKELERLRNGSVKLKEKASGLQSK 361
QH+Y+EKQLDSLKAAS+PRKDEL+RL L +TI+ E+KE+ERL GS +LK+KA LQSK
Sbjct: 780 QHSYLEKQLDSLKAASKPRKDELNRLEVLNKTISAEKKEIERLIEGSKQLKDKALELQSK 839
Query: 362 IENAGGEKLKRQKAKVNKIQSDIDKNNTEINRCKVLIVTADKMIKKLTKGIEEAKKEKER 541
IENAGGE+LK QK+KVNKIQ DIDK+NTEINR KV I T KM+KKL KGIEE+KKEK+R
Sbjct: 840 IENAGGERLKLQKSKVNKIQFDIDKSNTEINRHKVQIETGQKMMKKLKKGIEESKKEKDR 899
Query: 542 FLAEKENLLSVFKEIEHRAFRVQDNYNKTQKLIDEHKDVLDGAKEEYHSLKKTMDQMRAS 721
+ EKE L K+IE +AF VQDNYNKTQ+LID+HKDVLD AK +Y LKKT+D++RAS
Sbjct: 900 VVDEKEKLHLSHKDIEQKAFSVQDNYNKTQELIDQHKDVLDKAKSDYEKLKKTVDELRAS 959
Query: 722 EVDADYKLQDMRKLCKEWEMKGKAYXXXXXXXXXXXXXHMQQIQKDAVDPEKLQATLGDL 901
EVD DYKLQDM+KL KE EMKGK Y HM+QIQKD VDPEKLQATL D
Sbjct: 960 EVDVDYKLQDMKKLYKELEMKGKGYKRKLEELQVALVKHMEQIQKDLVDPEKLQATLADK 1019
Query: 902 TLRESCELKKSLEMVALLEAQLKELNPNLDSISEYRKKASLYSDRVEELNMVTQERDDLK 1081
TL E C LK++LEMVAL+EAQLKE+NPNLDSISEYR+K S+Y++RV++LNMVTQERDD+K
Sbjct: 1020 TLTEDCGLKRALEMVALIEAQLKEMNPNLDSISEYRRKVSVYNERVQDLNMVTQERDDVK 1079
Query: 1082 KHYDELRKKRL------DEFMAGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVV 1243
K YDE +K+RL DEFMAGF+TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVV
Sbjct: 1080 KQYDEWKKRRLVYFTLMDEFMAGFHTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVV 1139
Query: 1244 FSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGH 1423
FSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGH
Sbjct: 1140 FSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGH 1199
Query: 1424 YVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFAICENAA 1585
YVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSF +CE AA
Sbjct: 1200 YVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCEKAA 1253
>ref|NP_001190492.1| structural maintenance of chromosomes protein 4 [Arabidopsis
thaliana] gi|332008312|gb|AED95695.1| structural
maintenance of chromosomes protein 4 [Arabidopsis
thaliana]
Length = 1244
Score = 771 bits (1991), Expect = 0.0
Identities = 388/525 (73%), Positives = 446/525 (84%)
Frame = +2
Query: 2 VSGETVANAEKELAKLVDQLNGLRQRIAGAIRQYQASEKTMADLKMDSAKRQKEIHSLNE 181
VSGE VANAE EL+K+VD LN +R+++ A+RQY+A+E ++ L+M+ AK Q+EI SLN
Sbjct: 716 VSGEAVANAENELSKIVDMLNNIREKVGNAVRQYRAAENEVSGLEMELAKSQREIESLNS 775
Query: 182 QHNYIEKQLDSLKAASQPRKDELDRLVELKETIATEEKELERLRNGSVKLKEKASGLQSK 361
+HNY+EKQL SL+AASQP+ DE+DRL ELK+ I+ EEKE+E L GS +LK+KA LQ+
Sbjct: 776 EHNYLEKQLASLEAASQPKTDEIDRLKELKKIISKEEKEIENLEKGSKQLKDKALELQTN 835
Query: 362 IENAGGEKLKRQKAKVNKIQSDIDKNNTEINRCKVLIVTADKMIKKLTKGIEEAKKEKER 541
IENAGGEKLK QKAKV KIQ+DIDKNNTEINRC V I T K+IKKLTKGIEEA +EKER
Sbjct: 836 IENAGGEKLKGQKAKVEKIQTDIDKNNTEINRCNVQIETNQKLIKKLTKGIEEATREKER 895
Query: 542 FLAEKENLLSVFKEIEHRAFRVQDNYNKTQKLIDEHKDVLDGAKEEYHSLKKTMDQMRAS 721
EKENL FK+I +AF +Q+ Y KTQ+LIDEHKDVL GAK +Y +LKK++D+++AS
Sbjct: 896 LEGEKENLHVTFKDITQKAFEIQETYKKTQQLIDEHKDVLTGAKSDYENLKKSVDELKAS 955
Query: 722 EVDADYKLQDMRKLCKEWEMKGKAYXXXXXXXXXXXXXHMQQIQKDAVDPEKLQATLGDL 901
VDA++K+QDM+K E EM+ K Y HM+QIQKD VDP+KLQATL D
Sbjct: 956 RVDAEFKVQDMKKKYNELEMREKGYKKKLNDLQIAFTKHMEQIQKDLVDPDKLQATLMDN 1015
Query: 902 TLRESCELKKSLEMVALLEAQLKELNPNLDSISEYRKKASLYSDRVEELNMVTQERDDLK 1081
L E+C+LK++LEMVALLEAQLKELNPNLDSI+EYR K LY+ RV+ELN VTQERDD +
Sbjct: 1016 NLNEACDLKRALEMVALLEAQLKELNPNLDSIAEYRSKVELYNGRVDELNSVTQERDDTR 1075
Query: 1082 KHYDELRKKRLDEFMAGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPP 1261
K YDELRK+RLDEFMAGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPP
Sbjct: 1076 KQYDELRKRRLDEFMAGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPP 1135
Query: 1262 KKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRT 1441
KKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRT
Sbjct: 1136 KKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRT 1195
Query: 1442 KDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFAICE 1576
KDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFA+C+
Sbjct: 1196 KDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFAVCQ 1240