BLASTX nr result

ID: Coptis24_contig00022443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022443
         (889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281168.1| PREDICTED: ABC transporter I family member 2...   348   9e-94
emb|CAN66319.1| hypothetical protein VITISV_040623 [Vitis vinifera]   348   9e-94
ref|XP_003633613.1| PREDICTED: ABC transporter I family member 2...   338   8e-91
ref|XP_002308160.1| ABC transporter family protein [Populus tric...   338   1e-90
ref|XP_002303716.1| ABC transporter family protein [Populus tric...   334   1e-89

>ref|XP_002281168.1| PREDICTED: ABC transporter I family member 20 isoform 1 [Vitis
           vinifera] gi|296089817|emb|CBI39636.3| unnamed protein
           product [Vitis vinifera]
          Length = 329

 Score =  348 bits (893), Expect = 9e-94
 Identities = 172/227 (75%), Positives = 188/227 (82%)
 Frame = +3

Query: 3   WRRDVAFAGFDIPIQMDIAAEKMIFGVSGIDPQRRTELIKVLDIDLSWRMHKVSDGQRRR 182
           WRRDVAFAGF++PIQMD++AEKMIFGVSGIDPQRR ELIKVLDIDLSWR+HKVSDGQRRR
Sbjct: 102 WRRDVAFAGFEVPIQMDVSAEKMIFGVSGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRR 161

Query: 183 VQICMGLLKPFKVLLLDEITXXXXXXXXXXXXNFLKKECQERGATIIYATHIFDGLENWP 362
           VQICMGLLKPFKVLLLDEIT             FL+KEC+ERGATIIYATHIFDGLENWP
Sbjct: 162 VQICMGLLKPFKVLLLDEITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLENWP 221

Query: 363 SHIVYVAHGKLQLAMPMDKVKEISNLSLMRTVECWLXXXXXXXXXXXXXXXASGLSEFKD 542
           SH+VYVAHGKLQLAMPM+KV+E+SNLSLMRTVE WL               A GL EF+ 
Sbjct: 222 SHLVYVAHGKLQLAMPMEKVREMSNLSLMRTVESWLRKERDEGRKRRKERKAVGLPEFES 281

Query: 543 QIDGSRVIGGPAQNSARALNNGWAAGRLHSTIAGEENFLLSSNRVLR 683
           Q++GSRV G PA+ + RALNNGWAAGRLHSTIAGEENF LSSN VLR
Sbjct: 282 QVEGSRVAGDPARAAVRALNNGWAAGRLHSTIAGEENFFLSSNSVLR 328


>emb|CAN66319.1| hypothetical protein VITISV_040623 [Vitis vinifera]
          Length = 329

 Score =  348 bits (893), Expect = 9e-94
 Identities = 172/227 (75%), Positives = 188/227 (82%)
 Frame = +3

Query: 3   WRRDVAFAGFDIPIQMDIAAEKMIFGVSGIDPQRRTELIKVLDIDLSWRMHKVSDGQRRR 182
           WRRDVAFAGF++PIQMD++AEKMIFGVSGIDPQRR ELIKVLDIDLSWR+HKVSDGQRRR
Sbjct: 102 WRRDVAFAGFEVPIQMDVSAEKMIFGVSGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRR 161

Query: 183 VQICMGLLKPFKVLLLDEITXXXXXXXXXXXXNFLKKECQERGATIIYATHIFDGLENWP 362
           VQICMGLLKPFKVLLLDEIT             FL+KEC+ERGATIIYATHIFDGLENWP
Sbjct: 162 VQICMGLLKPFKVLLLDEITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLENWP 221

Query: 363 SHIVYVAHGKLQLAMPMDKVKEISNLSLMRTVECWLXXXXXXXXXXXXXXXASGLSEFKD 542
           SH+VYVAHGKLQLAMPM+KV+E+SNLSLMRTVE WL               A GL EF+ 
Sbjct: 222 SHLVYVAHGKLQLAMPMEKVREMSNLSLMRTVESWLRKERDEGRKRRKERKAVGLPEFES 281

Query: 543 QIDGSRVIGGPAQNSARALNNGWAAGRLHSTIAGEENFLLSSNRVLR 683
           Q++GSRV G PA+ + RALNNGWAAGRLHSTIAGEENF LSSN VLR
Sbjct: 282 QVEGSRVAGDPARAAVRALNNGWAAGRLHSTIAGEENFFLSSNSVLR 328


>ref|XP_003633613.1| PREDICTED: ABC transporter I family member 20 isoform 2 [Vitis
           vinifera]
          Length = 343

 Score =  338 bits (868), Expect = 8e-91
 Identities = 172/241 (71%), Positives = 188/241 (78%), Gaps = 14/241 (5%)
 Frame = +3

Query: 3   WRRDVAFAGFDIPIQMDIAAEKMIFGVSGIDPQRRTELIKV--------------LDIDL 140
           WRRDVAFAGF++PIQMD++AEKMIFGVSGIDPQRR ELIKV              LDIDL
Sbjct: 102 WRRDVAFAGFEVPIQMDVSAEKMIFGVSGIDPQRRAELIKVRCESETPKLQSCNVLDIDL 161

Query: 141 SWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXNFLKKECQERGATI 320
           SWR+HKVSDGQRRRVQICMGLLKPFKVLLLDEIT             FL+KEC+ERGATI
Sbjct: 162 SWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLKFLRKECEERGATI 221

Query: 321 IYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKEISNLSLMRTVECWLXXXXXXXXXX 500
           IYATHIFDGLENWPSH+VYVAHGKLQLAMPM+KV+E+SNLSLMRTVE WL          
Sbjct: 222 IYATHIFDGLENWPSHLVYVAHGKLQLAMPMEKVREMSNLSLMRTVESWLRKERDEGRKR 281

Query: 501 XXXXXASGLSEFKDQIDGSRVIGGPAQNSARALNNGWAAGRLHSTIAGEENFLLSSNRVL 680
                A GL EF+ Q++GSRV G PA+ + RALNNGWAAGRLHSTIAGEENF LSSN VL
Sbjct: 282 RKERKAVGLPEFESQVEGSRVAGDPARAAVRALNNGWAAGRLHSTIAGEENFFLSSNSVL 341

Query: 681 R 683
           R
Sbjct: 342 R 342


>ref|XP_002308160.1| ABC transporter family protein [Populus trichocarpa]
           gi|222854136|gb|EEE91683.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 325

 Score =  338 bits (866), Expect = 1e-90
 Identities = 166/227 (73%), Positives = 184/227 (81%)
 Frame = +3

Query: 3   WRRDVAFAGFDIPIQMDIAAEKMIFGVSGIDPQRRTELIKVLDIDLSWRMHKVSDGQRRR 182
           WRR+VAFAGF++PIQMDI+AEKMIFGV+GIDPQRR ELIKVLDIDLSWRMHKVSDGQRRR
Sbjct: 99  WRREVAFAGFEVPIQMDISAEKMIFGVAGIDPQRRAELIKVLDIDLSWRMHKVSDGQRRR 158

Query: 183 VQICMGLLKPFKVLLLDEITXXXXXXXXXXXXNFLKKECQERGATIIYATHIFDGLENWP 362
           VQICMGLL+PFKVLLLDEIT             FL+KEC+ERGATIIYATHIFDGLE WP
Sbjct: 159 VQICMGLLRPFKVLLLDEITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLEEWP 218

Query: 363 SHIVYVAHGKLQLAMPMDKVKEISNLSLMRTVECWLXXXXXXXXXXXXXXXASGLSEFKD 542
           +HI+YVAHGKLQ A+PM K+KE SNLSLMRTVE WL               A GL E++ 
Sbjct: 219 THILYVAHGKLQFALPMAKIKETSNLSLMRTVESWLRKERDEERKRRQERKAGGLPEYEK 278

Query: 543 QIDGSRVIGGPAQNSARALNNGWAAGRLHSTIAGEENFLLSSNRVLR 683
           Q++GSRV G PA+  AR +NNGWAAGRLHSTIAGEENF LSSNRVLR
Sbjct: 279 QVEGSRVTGDPARVGARVMNNGWAAGRLHSTIAGEENFFLSSNRVLR 325


>ref|XP_002303716.1| ABC transporter family protein [Populus trichocarpa]
           gi|222841148|gb|EEE78695.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 326

 Score =  334 bits (857), Expect = 1e-89
 Identities = 165/227 (72%), Positives = 182/227 (80%)
 Frame = +3

Query: 3   WRRDVAFAGFDIPIQMDIAAEKMIFGVSGIDPQRRTELIKVLDIDLSWRMHKVSDGQRRR 182
           WRR+VAFAGF++PIQMDI+AEKMIFGV+GIDPQRR ELIKVLDIDLSWRMHKVSDGQRRR
Sbjct: 100 WRREVAFAGFEVPIQMDISAEKMIFGVAGIDPQRRAELIKVLDIDLSWRMHKVSDGQRRR 159

Query: 183 VQICMGLLKPFKVLLLDEITXXXXXXXXXXXXNFLKKECQERGATIIYATHIFDGLENWP 362
           VQICMGLL+PFKVLLLDEI              FL+KEC+ER ATIIYATHIFDGLE WP
Sbjct: 160 VQICMGLLRPFKVLLLDEIMVDLDVLARADLLKFLRKECEERSATIIYATHIFDGLEEWP 219

Query: 363 SHIVYVAHGKLQLAMPMDKVKEISNLSLMRTVECWLXXXXXXXXXXXXXXXASGLSEFKD 542
           +HI+YVAHGKLQ AMPM K+KE SNLSLMRTVE WL               A GL E++ 
Sbjct: 220 THILYVAHGKLQFAMPMAKIKETSNLSLMRTVESWLRKERDEERKRRQERKAGGLPEYEK 279

Query: 543 QIDGSRVIGGPAQNSARALNNGWAAGRLHSTIAGEENFLLSSNRVLR 683
           Q++GSRV G PA+  AR +NNGWAAGRLHSTIAGEENF LSSNRVLR
Sbjct: 280 QVEGSRVTGDPARVGARVMNNGWAAGRLHSTIAGEENFFLSSNRVLR 326


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