BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022441
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial pro...   152   5e-35
ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial pro...   145   6e-33
ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   140   2e-31
ref|XP_004147417.1| PREDICTED: uncharacterized mitochondrial pro...   140   2e-31
ref|XP_002519696.1| RNA binding protein, putative [Ricinus commu...   137   1e-30

>ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Vitis
           vinifera]
          Length = 689

 Score =  152 bits (383), Expect = 5e-35
 Identities = 79/154 (51%), Positives = 98/154 (63%), Gaps = 2/154 (1%)
 Frame = +3

Query: 3   PLPPQLHSQTSLEQ--SQPQNQQERKQKDPHSLMKEDPIQVCSDLWFKTFSDSITKPFSN 176
           PL P L + T +    +   +Q+  +++DP+SLMKEDPIQVCS LW ++FS+    PFSN
Sbjct: 11  PLQPLLTTITPIRTLTALSTHQEREQEQDPYSLMKEDPIQVCSSLWVRSFSNQTHAPFSN 70

Query: 177 LTGFLKKFDLWVLAYQRSCAKETGSFPPRNAIHFNXXXXXXXXXXXXXXXXXXWGMKTDL 356
           LTGFL KFDLWVLAYQRSCA  TGSFPPRNAIH                    W  K   
Sbjct: 71  LTGFLSKFDLWVLAYQRSCAHFTGSFPPRNAIHSQVLRDLLSLQNAVVRGRFSWNHKIHS 130

Query: 357 ILRSPNDKLGTKVLSKRKLQALLESDQRSFQDRV 458
            +RSPN+K  T+  SKRK+Q++LES+   FQDRV
Sbjct: 131 YIRSPNEKPLTEFTSKRKIQSILESNAPCFQDRV 164


>ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Glycine max]
          Length = 686

 Score =  145 bits (365), Expect = 6e-33
 Identities = 74/142 (52%), Positives = 90/142 (63%)
 Frame = +3

Query: 33  SLEQSQPQNQQERKQKDPHSLMKEDPIQVCSDLWFKTFSDSITKPFSNLTGFLKKFDLWV 212
           S   SQP NQ +    DPHSLMK+DPI++C+ LW KTFS S T  F NLTGFL  FDLW+
Sbjct: 25  STHSSQPPNQNQ----DPHSLMKQDPIEICTSLWVKTFSSSTTS-FPNLTGFLSNFDLWL 79

Query: 213 LAYQRSCAKETGSFPPRNAIHFNXXXXXXXXXXXXXXXXXXWGMKTDLILRSPNDKLGTK 392
           LAYQRSCA  TG+FPPRNA+H                    W  KT+ +LR+PND   +K
Sbjct: 80  LAYQRSCAHATGTFPPRNAVHATVLHSLLSLRNAVIRNRFEWNDKTNPLLRAPNDAAVSK 139

Query: 393 VLSKRKLQALLESDQRSFQDRV 458
            LSKRK +A ++S +  FQDRV
Sbjct: 140 PLSKRKFRAAIQSGKPCFQDRV 161


>ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized mitochondrial
           protein ymf11-like [Cucumis sativus]
          Length = 697

 Score =  140 bits (352), Expect = 2e-31
 Identities = 72/150 (48%), Positives = 91/150 (60%), Gaps = 1/150 (0%)
 Frame = +3

Query: 12  PQLHSQTSLEQS-QPQNQQERKQKDPHSLMKEDPIQVCSDLWFKTFSDSITKPFSNLTGF 188
           P LHS      S + QN      +DP+S +KEDPI +CS +W K F+      FS+L+ F
Sbjct: 31  PALHSPHPPSISLRLQNPPHLHDEDPYSHLKEDPIDICSSIWLKAFASLPNSSFSHLSSF 90

Query: 189 LKKFDLWVLAYQRSCAKETGSFPPRNAIHFNXXXXXXXXXXXXXXXXXXWGMKTDLILRS 368
           L KFDLWVLAYQRSCA  TG+FPPRNAIH +                  W  K + ++R 
Sbjct: 91  LSKFDLWVLAYQRSCADLTGNFPPRNAIHSHVLRDLLSLRNAVINGKFSWNRKANQLIRC 150

Query: 369 PNDKLGTKVLSKRKLQALLESDQRSFQDRV 458
           PNDK  T ++SKRKL+A+LESD+  FQDRV
Sbjct: 151 PNDKSRTHLISKRKLRAMLESDEPCFQDRV 180


>ref|XP_004147417.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Cucumis sativus]
          Length = 697

 Score =  140 bits (352), Expect = 2e-31
 Identities = 72/150 (48%), Positives = 91/150 (60%), Gaps = 1/150 (0%)
 Frame = +3

Query: 12  PQLHSQTSLEQS-QPQNQQERKQKDPHSLMKEDPIQVCSDLWFKTFSDSITKPFSNLTGF 188
           P LHS      S + QN      +DP+S +KEDPI +CS +W K F+      FS+L+ F
Sbjct: 31  PALHSPHPPSISLRLQNPPHLHDEDPYSHLKEDPIDICSSIWLKAFASLPNSSFSHLSSF 90

Query: 189 LKKFDLWVLAYQRSCAKETGSFPPRNAIHFNXXXXXXXXXXXXXXXXXXWGMKTDLILRS 368
           L KFDLWVLAYQRSCA  TG+FPPRNAIH +                  W  K + ++R 
Sbjct: 91  LSKFDLWVLAYQRSCADLTGNFPPRNAIHSHVLRDLLSLRNAVINGKFSWNRKANQLIRC 150

Query: 369 PNDKLGTKVLSKRKLQALLESDQRSFQDRV 458
           PNDK  T ++SKRKL+A+LESD+  FQDRV
Sbjct: 151 PNDKSRTHLISKRKLRAMLESDEPCFQDRV 180


>ref|XP_002519696.1| RNA binding protein, putative [Ricinus communis]
           gi|223541113|gb|EEF42669.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 681

 Score =  137 bits (345), Expect = 1e-30
 Identities = 66/127 (51%), Positives = 84/127 (66%)
 Frame = +3

Query: 78  KDPHSLMKEDPIQVCSDLWFKTFSDSITKPFSNLTGFLKKFDLWVLAYQRSCAKETGSFP 257
           +DP+SL+K+DPI++C+ LW K+FS      F NLTGFL K DLWVLAYQRSCA+ TG+FP
Sbjct: 30  QDPYSLLKQDPIEICTSLWVKSFSSPPNTTFPNLTGFLSKLDLWVLAYQRSCAQVTGTFP 89

Query: 258 PRNAIHFNXXXXXXXXXXXXXXXXXXWGMKTDLILRSPNDKLGTKVLSKRKLQALLESDQ 437
           PRNA+H                    W  KT  I+RSPNDK  TK++SK KL+A++ S+ 
Sbjct: 90  PRNALHSQTLHSLLSLQNAVVHNRFKWNDKTRQIIRSPNDKPFTKLVSKTKLKAMVNSND 149

Query: 438 RSFQDRV 458
             FQDRV
Sbjct: 150 PCFQDRV 156