BLASTX nr result

ID: Coptis24_contig00022437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022437
         (695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526811.1| protein with unknown function [Ricinus commu...   342   4e-92
ref|XP_004138831.1| PREDICTED: uncharacterized protein LOC101221...   340   2e-91
ref|XP_002891189.1| hypothetical protein ARALYDRAFT_473682 [Arab...   338   6e-91
ref|NP_174785.1| fanconi anemia group M protein [Arabidopsis tha...   337   1e-90
gb|AFL55357.1| Fanconia anemia complementation group M-like prot...   337   1e-90

>ref|XP_002526811.1| protein with unknown function [Ricinus communis]
           gi|223533815|gb|EEF35546.1| protein with unknown
           function [Ricinus communis]
          Length = 1351

 Score =  342 bits (877), Expect = 4e-92
 Identities = 171/231 (74%), Positives = 195/231 (84%)
 Frame = -1

Query: 695 EKDIQSGTCLVKHLVCLVIDEAHRASGNYSYCVAVRELMAVPLQFRILALTATPGSKQQA 516
           EKDIQ+GTCLVKHLVCLVIDEAHRA GNYSYCVAV ELMAVP+Q RILALTATPGSKQQA
Sbjct: 216 EKDIQAGTCLVKHLVCLVIDEAHRALGNYSYCVAVCELMAVPIQLRILALTATPGSKQQA 275

Query: 515 IQKVIDNLQISKLEYRTETDDDVSPYVHNRKLELVKVPMGKDAVEINDMILEAIRPFVTK 336
           IQ +IDNL IS LEYR E D DV PYVHNRK+EL++V +GKDAV+IN  +L  I P+V +
Sbjct: 276 IQHIIDNLHISTLEYRNEGDADVVPYVHNRKIELIEVALGKDAVDINKQLLAVIHPYVAR 335

Query: 335 LTSFGVHLNRDSQTLSPCDLLNTRDKFRQAPPQDLSHLKYGEVEGCFGVLITLYHVRKLL 156
           L++ G+  NRD +T+ P DLLN+RDKFR+APP +L   KYGE+E  F  LITLYH+RKLL
Sbjct: 336 LSAVGLLQNRDYKTVCPPDLLNSRDKFRRAPPSELPQNKYGEIEAYFAGLITLYHIRKLL 395

Query: 155 SSHGIRPAFDMLEEKLKQGSFARLMNKNEVIWKTKALMQQSLSHGAPSPKL 3
           SSHGIRPA++MLEEKLKQGSFARLM+KNE I K K  MQQSLSHGAPSPKL
Sbjct: 396 SSHGIRPAYEMLEEKLKQGSFARLMSKNEDIRKVKLSMQQSLSHGAPSPKL 446


>ref|XP_004138831.1| PREDICTED: uncharacterized protein LOC101221910 [Cucumis sativus]
          Length = 1384

 Score =  340 bits (872), Expect = 2e-91
 Identities = 165/231 (71%), Positives = 198/231 (85%)
 Frame = -1

Query: 695 EKDIQSGTCLVKHLVCLVIDEAHRASGNYSYCVAVRELMAVPLQFRILALTATPGSKQQA 516
           EKDIQSGTCL+K+LVCLVIDEAHRA GNYSYCVAVREL  +P+  RILALTATPGSK Q 
Sbjct: 246 EKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTKIPVPLRILALTATPGSKHQG 305

Query: 515 IQKVIDNLQISKLEYRTETDDDVSPYVHNRKLELVKVPMGKDAVEINDMILEAIRPFVTK 336
           IQ++IDNL IS L+YR E+D DVSPYVH+RK+EL++V MG+DAVEI++ +LE +RPFV K
Sbjct: 306 IQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAK 365

Query: 335 LTSFGVHLNRDSQTLSPCDLLNTRDKFRQAPPQDLSHLKYGEVEGCFGVLITLYHVRKLL 156
           L S G+  NRD +TLSPCDLLN+RDKFRQAPP    H+KY +VEG FGVLITLYH+RKLL
Sbjct: 366 LRSIGILQNRDYRTLSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLL 425

Query: 155 SSHGIRPAFDMLEEKLKQGSFARLMNKNEVIWKTKALMQQSLSHGAPSPKL 3
           SSHGIRPA +MLEEKL+QGSFAR M+KN  + + + +M++SL+HGAPSPKL
Sbjct: 426 SSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKL 476


>ref|XP_002891189.1| hypothetical protein ARALYDRAFT_473682 [Arabidopsis lyrata subsp.
           lyrata] gi|297337031|gb|EFH67448.1| hypothetical protein
           ARALYDRAFT_473682 [Arabidopsis lyrata subsp. lyrata]
          Length = 1321

 Score =  338 bits (867), Expect = 6e-91
 Identities = 166/231 (71%), Positives = 194/231 (83%)
 Frame = -1

Query: 695 EKDIQSGTCLVKHLVCLVIDEAHRASGNYSYCVAVRELMAVPLQFRILALTATPGSKQQA 516
           EKDIQSGTCL  +LVCLVIDEAHRA GNYSYCV VRELMAVP+Q RILALTATPGSK  A
Sbjct: 229 EKDIQSGTCLTNYLVCLVIDEAHRALGNYSYCVVVRELMAVPVQLRILALTATPGSKTLA 288

Query: 515 IQKVIDNLQISKLEYRTETDDDVSPYVHNRKLELVKVPMGKDAVEINDMILEAIRPFVTK 336
           IQ +IDNLQIS LEYR E+D DV PYVH+RKLEL++VP+G+DA +++  + + IRP+  +
Sbjct: 289 IQGIIDNLQISTLEYRNESDHDVCPYVHDRKLELIEVPLGQDADDVSKRLFDVIRPYAVR 348

Query: 335 LTSFGVHLNRDSQTLSPCDLLNTRDKFRQAPPQDLSHLKYGEVEGCFGVLITLYHVRKLL 156
           L +FGV+LNRD QTLSP ++L  RDKFRQAP   L H+ +G+VE CF  LITLYH+RKLL
Sbjct: 349 LKNFGVNLNRDLQTLSPHEVLMARDKFRQAPLPGLPHVNHGDVESCFSALITLYHIRKLL 408

Query: 155 SSHGIRPAFDMLEEKLKQGSFARLMNKNEVIWKTKALMQQSLSHGAPSPKL 3
           SSHGIRPA++MLEEKLK+G FARLM+KNE I KTK LMQQ LSHGAPSPKL
Sbjct: 409 SSHGIRPAYEMLEEKLKEGPFARLMSKNEDIRKTKLLMQQRLSHGAPSPKL 459


>ref|NP_174785.1| fanconi anemia group M protein [Arabidopsis thaliana]
           gi|332193685|gb|AEE31806.1| fanconi anemia group M
           protein [Arabidopsis thaliana]
          Length = 1324

 Score =  337 bits (864), Expect = 1e-90
 Identities = 165/231 (71%), Positives = 193/231 (83%)
 Frame = -1

Query: 695 EKDIQSGTCLVKHLVCLVIDEAHRASGNYSYCVAVRELMAVPLQFRILALTATPGSKQQA 516
           EKDIQSGTCL  +LVCLVIDEAHRA GNYSYCV VRELMAVP+Q RILALTATPGSK QA
Sbjct: 219 EKDIQSGTCLTNYLVCLVIDEAHRALGNYSYCVVVRELMAVPIQLRILALTATPGSKTQA 278

Query: 515 IQKVIDNLQISKLEYRTETDDDVSPYVHNRKLELVKVPMGKDAVEINDMILEAIRPFVTK 336
           IQ +IDNLQIS LEYR E+D DV PYVH+RKLE+++VP+G+DA +++  +   IRP+  +
Sbjct: 279 IQGIIDNLQISTLEYRNESDHDVCPYVHDRKLEVIEVPLGQDADDVSKRLFHVIRPYAVR 338

Query: 335 LTSFGVHLNRDSQTLSPCDLLNTRDKFRQAPPQDLSHLKYGEVEGCFGVLITLYHVRKLL 156
           L +FGV+LNRD QTLSP ++L  RDKFRQAP   L H+ +G+VE CF  LITLYH+RKLL
Sbjct: 339 LKNFGVNLNRDIQTLSPHEVLMARDKFRQAPLPGLPHVNHGDVESCFAALITLYHIRKLL 398

Query: 155 SSHGIRPAFDMLEEKLKQGSFARLMNKNEVIWKTKALMQQSLSHGAPSPKL 3
           SSHGIRPA++MLEEKLK+G FARLM+KNE I  TK LMQQ LSHGAPSPKL
Sbjct: 399 SSHGIRPAYEMLEEKLKEGPFARLMSKNEDIRMTKLLMQQRLSHGAPSPKL 449


>gb|AFL55357.1| Fanconia anemia complementation group M-like protein [Arabidopsis
           thaliana]
          Length = 1344

 Score =  337 bits (864), Expect = 1e-90
 Identities = 165/231 (71%), Positives = 193/231 (83%)
 Frame = -1

Query: 695 EKDIQSGTCLVKHLVCLVIDEAHRASGNYSYCVAVRELMAVPLQFRILALTATPGSKQQA 516
           EKDIQSGTCL  +LVCLVIDEAHRA GNYSYCV VRELMAVP+Q RILALTATPGSK QA
Sbjct: 221 EKDIQSGTCLTNYLVCLVIDEAHRALGNYSYCVVVRELMAVPIQLRILALTATPGSKTQA 280

Query: 515 IQKVIDNLQISKLEYRTETDDDVSPYVHNRKLELVKVPMGKDAVEINDMILEAIRPFVTK 336
           IQ +IDNLQIS LEYR E+D DV PYVH+RKLE+++VP+G+DA +++  +   IRP+  +
Sbjct: 281 IQGIIDNLQISTLEYRNESDHDVCPYVHDRKLEVIEVPLGQDADDVSKRLFHVIRPYAVR 340

Query: 335 LTSFGVHLNRDSQTLSPCDLLNTRDKFRQAPPQDLSHLKYGEVEGCFGVLITLYHVRKLL 156
           L +FGV+LNRD QTLSP ++L  RDKFRQAP   L H+ +G+VE CF  LITLYH+RKLL
Sbjct: 341 LKNFGVNLNRDIQTLSPHEVLMARDKFRQAPLPGLPHVNHGDVESCFAALITLYHIRKLL 400

Query: 155 SSHGIRPAFDMLEEKLKQGSFARLMNKNEVIWKTKALMQQSLSHGAPSPKL 3
           SSHGIRPA++MLEEKLK+G FARLM+KNE I  TK LMQQ LSHGAPSPKL
Sbjct: 401 SSHGIRPAYEMLEEKLKEGPFARLMSKNEDIRMTKLLMQQRLSHGAPSPKL 451


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