BLASTX nr result

ID: Coptis24_contig00022387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022387
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316182.1| amino acid transporter [Populus trichocarpa]...    72   4e-11
ref|XP_003545663.1| PREDICTED: putative sodium-coupled neutral a...    70   4e-11
ref|XP_002278665.1| PREDICTED: probable sodium-coupled neutral a...    72   5e-11
ref|XP_003519411.1| PREDICTED: putative sodium-coupled neutral a...    68   1e-10
ref|XP_004158972.1| PREDICTED: sodium-coupled neutral amino acid...    70   2e-10

>ref|XP_002316182.1| amino acid transporter [Populus trichocarpa]
           gi|222865222|gb|EEF02353.1| amino acid transporter
           [Populus trichocarpa]
          Length = 435

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/48 (70%), Positives = 41/48 (85%)
 Frame = +2

Query: 215 SYAGVMAESFGRVGSVVLQICVMVTTLGSLTIYLIIIGDVLSGSESNG 358
           +YAGVM E+FGRVGSV +QICVM+T LG L +YLIIIGDVLSG+  +G
Sbjct: 84  TYAGVMREAFGRVGSVTVQICVMITNLGCLIVYLIIIGDVLSGNVHDG 131


>ref|XP_003545663.1| PREDICTED: putative sodium-coupled neutral amino acid transporter
           10-like [Glycine max]
          Length = 443

 Score = 69.7 bits (169), Expect(2) = 4e-11
 Identities = 31/48 (64%), Positives = 41/48 (85%)
 Frame = +2

Query: 215 SYAGVMAESFGRVGSVVLQICVMVTTLGSLTIYLIIIGDVLSGSESNG 358
           +YAG+MAESFG +GS+ ++ICV++T LG L IY II+GDVL G+ESNG
Sbjct: 91  TYAGMMAESFGSIGSLAVKICVIITNLGVLIIYFIILGDVLCGNESNG 138



 Score = 22.7 bits (47), Expect(2) = 4e-11
 Identities = 14/42 (33%), Positives = 15/42 (35%)
 Frame = +1

Query: 1   GIMSIPATLKXXXXXXXXXXXXXXXXXXXXXXXXXXRYTKSG 126
           GIMSIPAT+K                          RYT SG
Sbjct: 46  GIMSIPATMKVLGIVPGLVVIVLVALITDVTVEFMLRYTSSG 87


>ref|XP_002278665.1| PREDICTED: probable sodium-coupled neutral amino acid transporter 6
           [Vitis vinifera] gi|297736531|emb|CBI25402.3| unnamed
           protein product [Vitis vinifera]
          Length = 443

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/48 (68%), Positives = 41/48 (85%)
 Frame = +2

Query: 215 SYAGVMAESFGRVGSVVLQICVMVTTLGSLTIYLIIIGDVLSGSESNG 358
           +YAG+MAES+GR+GSV +QICVM+T LG L IY IIIGDVLSG++  G
Sbjct: 91  TYAGLMAESYGRIGSVAVQICVMITNLGCLIIYQIIIGDVLSGNQPEG 138


>ref|XP_003519411.1| PREDICTED: putative sodium-coupled neutral amino acid transporter
           10-like [Glycine max]
          Length = 441

 Score = 67.8 bits (164), Expect(2) = 1e-10
 Identities = 30/48 (62%), Positives = 41/48 (85%)
 Frame = +2

Query: 215 SYAGVMAESFGRVGSVVLQICVMVTTLGSLTIYLIIIGDVLSGSESNG 358
           +YAG+MAESF  +GS+ ++ICV+++ LG L IY II+GDVLSG+ESNG
Sbjct: 89  TYAGMMAESFASIGSLAVKICVIISNLGVLIIYFIILGDVLSGNESNG 136



 Score = 22.7 bits (47), Expect(2) = 1e-10
 Identities = 14/42 (33%), Positives = 15/42 (35%)
 Frame = +1

Query: 1   GIMSIPATLKXXXXXXXXXXXXXXXXXXXXXXXXXXRYTKSG 126
           GIMSIPAT+K                          RYT SG
Sbjct: 44  GIMSIPATMKVLGIVPGLVVIVLVALITDVTVEFMLRYTSSG 85


>ref|XP_004158972.1| PREDICTED: sodium-coupled neutral amino acid transporter 4-like
           [Cucumis sativus]
          Length = 439

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/48 (68%), Positives = 39/48 (81%)
 Frame = +2

Query: 215 SYAGVMAESFGRVGSVVLQICVMVTTLGSLTIYLIIIGDVLSGSESNG 358
           +YAGVM ESFG +GSV  QICVM+T LG L +YLIIIGDVLSG++  G
Sbjct: 83  TYAGVMKESFGLIGSVATQICVMITNLGCLIMYLIIIGDVLSGNKGGG 130


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