BLASTX nr result

ID: Coptis24_contig00022383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022383
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633167.1| PREDICTED: uncharacterized protein LOC100257...    63   3e-08
emb|CBI36582.3| unnamed protein product [Vitis vinifera]               63   3e-08
ref|XP_002308419.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002528386.1| eukaryotic translation initiation factor 3 s...    56   3e-06

>ref|XP_003633167.1| PREDICTED: uncharacterized protein LOC100257033 [Vitis vinifera]
          Length = 1897

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 39/82 (47%), Positives = 44/82 (53%)
 Frame = +3

Query: 3   GLGKHGDLLKEIKKKTDEKSLNAEQGRDNVSTNGPNPRGKLESIDDXXXXXXXXXXXXXX 182
           GLGK G LLKEIKKK D++S  AEQG+D   TN  +   KL   D               
Sbjct: 621 GLGKQGGLLKEIKKKIDDRSGKAEQGKDATLTNSLDMNKKL---DASHLEKQDEEKEMMW 677

Query: 183 XXXXPEAALLRLKDSGTGFHLK 248
               PEAA LRLK+S TG HLK
Sbjct: 678 RKLLPEAAYLRLKESETGLHLK 699


>emb|CBI36582.3| unnamed protein product [Vitis vinifera]
          Length = 1034

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 39/82 (47%), Positives = 44/82 (53%)
 Frame = +3

Query: 3   GLGKHGDLLKEIKKKTDEKSLNAEQGRDNVSTNGPNPRGKLESIDDXXXXXXXXXXXXXX 182
           GLGK G LLKEIKKK D++S  AEQG+D   TN  +   KL   D               
Sbjct: 599 GLGKQGGLLKEIKKKIDDRSGKAEQGKDATLTNSLDMNKKL---DASHLEKQDEEKEMMW 655

Query: 183 XXXXPEAALLRLKDSGTGFHLK 248
               PEAA LRLK+S TG HLK
Sbjct: 656 RKLLPEAAYLRLKESETGLHLK 677


>ref|XP_002308419.1| predicted protein [Populus trichocarpa] gi|222854395|gb|EEE91942.1|
           predicted protein [Populus trichocarpa]
          Length = 859

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/82 (41%), Positives = 44/82 (53%)
 Frame = +3

Query: 3   GLGKHGDLLKEIKKKTDEKSLNAEQGRDNVSTNGPNPRGKLESIDDXXXXXXXXXXXXXX 182
           GLGK G LL+EIKKKTD K+   E+G+D  + N  +   K +S +               
Sbjct: 530 GLGKQGALLREIKKKTDVKTGKTEEGKDVYAGNNLDMSKKPDSTNQEEMEKKDEEMKVIW 589

Query: 183 XXXXPEAALLRLKDSGTGFHLK 248
               PEAA LRL++S TG HLK
Sbjct: 590 KKLLPEAAYLRLRESETGLHLK 611


>ref|XP_002528386.1| eukaryotic translation initiation factor 3 subunit, putative
           [Ricinus communis] gi|223532174|gb|EEF33979.1|
           eukaryotic translation initiation factor 3 subunit,
           putative [Ricinus communis]
          Length = 1888

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/82 (41%), Positives = 43/82 (52%)
 Frame = +3

Query: 3   GLGKHGDLLKEIKKKTDEKSLNAEQGRDNVSTNGPNPRGKLESIDDXXXXXXXXXXXXXX 182
           GLGK G LLKEIKKK D +    E+G+D VS    +   KL++++               
Sbjct: 625 GLGKQGALLKEIKKKIDVRGSKTEEGKD-VSVGNLDMNKKLDAVNQKELEKKEEEMEIMW 683

Query: 183 XXXXPEAALLRLKDSGTGFHLK 248
                EAA LRLK+S TG HLK
Sbjct: 684 KELLNEAAYLRLKESETGLHLK 705


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