BLASTX nr result
ID: Coptis24_contig00022383
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00022383 (500 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003633167.1| PREDICTED: uncharacterized protein LOC100257... 63 3e-08 emb|CBI36582.3| unnamed protein product [Vitis vinifera] 63 3e-08 ref|XP_002308419.1| predicted protein [Populus trichocarpa] gi|2... 59 4e-07 ref|XP_002528386.1| eukaryotic translation initiation factor 3 s... 56 3e-06 >ref|XP_003633167.1| PREDICTED: uncharacterized protein LOC100257033 [Vitis vinifera] Length = 1897 Score = 62.8 bits (151), Expect = 3e-08 Identities = 39/82 (47%), Positives = 44/82 (53%) Frame = +3 Query: 3 GLGKHGDLLKEIKKKTDEKSLNAEQGRDNVSTNGPNPRGKLESIDDXXXXXXXXXXXXXX 182 GLGK G LLKEIKKK D++S AEQG+D TN + KL D Sbjct: 621 GLGKQGGLLKEIKKKIDDRSGKAEQGKDATLTNSLDMNKKL---DASHLEKQDEEKEMMW 677 Query: 183 XXXXPEAALLRLKDSGTGFHLK 248 PEAA LRLK+S TG HLK Sbjct: 678 RKLLPEAAYLRLKESETGLHLK 699 >emb|CBI36582.3| unnamed protein product [Vitis vinifera] Length = 1034 Score = 62.8 bits (151), Expect = 3e-08 Identities = 39/82 (47%), Positives = 44/82 (53%) Frame = +3 Query: 3 GLGKHGDLLKEIKKKTDEKSLNAEQGRDNVSTNGPNPRGKLESIDDXXXXXXXXXXXXXX 182 GLGK G LLKEIKKK D++S AEQG+D TN + KL D Sbjct: 599 GLGKQGGLLKEIKKKIDDRSGKAEQGKDATLTNSLDMNKKL---DASHLEKQDEEKEMMW 655 Query: 183 XXXXPEAALLRLKDSGTGFHLK 248 PEAA LRLK+S TG HLK Sbjct: 656 RKLLPEAAYLRLKESETGLHLK 677 >ref|XP_002308419.1| predicted protein [Populus trichocarpa] gi|222854395|gb|EEE91942.1| predicted protein [Populus trichocarpa] Length = 859 Score = 58.9 bits (141), Expect = 4e-07 Identities = 34/82 (41%), Positives = 44/82 (53%) Frame = +3 Query: 3 GLGKHGDLLKEIKKKTDEKSLNAEQGRDNVSTNGPNPRGKLESIDDXXXXXXXXXXXXXX 182 GLGK G LL+EIKKKTD K+ E+G+D + N + K +S + Sbjct: 530 GLGKQGALLREIKKKTDVKTGKTEEGKDVYAGNNLDMSKKPDSTNQEEMEKKDEEMKVIW 589 Query: 183 XXXXPEAALLRLKDSGTGFHLK 248 PEAA LRL++S TG HLK Sbjct: 590 KKLLPEAAYLRLRESETGLHLK 611 >ref|XP_002528386.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis] gi|223532174|gb|EEF33979.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis] Length = 1888 Score = 56.2 bits (134), Expect = 3e-06 Identities = 34/82 (41%), Positives = 43/82 (52%) Frame = +3 Query: 3 GLGKHGDLLKEIKKKTDEKSLNAEQGRDNVSTNGPNPRGKLESIDDXXXXXXXXXXXXXX 182 GLGK G LLKEIKKK D + E+G+D VS + KL++++ Sbjct: 625 GLGKQGALLKEIKKKIDVRGSKTEEGKD-VSVGNLDMNKKLDAVNQKELEKKEEEMEIMW 683 Query: 183 XXXXPEAALLRLKDSGTGFHLK 248 EAA LRLK+S TG HLK Sbjct: 684 KELLNEAAYLRLKESETGLHLK 705