BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022372
         (1945 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533181.1| protein translocase secy subunit, putative [...   729   0.0  
ref|XP_002262945.2| PREDICTED: preprotein translocase subunit se...   723   0.0  
ref|XP_003527188.1| PREDICTED: preprotein translocase subunit se...   715   0.0  
emb|CBI24093.3| unnamed protein product [Vitis vinifera]              712   0.0  
ref|XP_002886190.1| hypothetical protein ARALYDRAFT_480774 [Arab...   707   0.0  

>ref|XP_002533181.1| protein translocase secy subunit, putative [Ricinus communis]
            gi|223527015|gb|EEF29204.1| protein translocase secy
            subunit, putative [Ricinus communis]
          Length = 557

 Score =  729 bits (1883), Expect = 0.0
 Identities = 388/509 (76%), Positives = 414/509 (81%), Gaps = 4/509 (0%)
 Frame = -1

Query: 1834 TSVCRASFTVDRKPHS---TWKVDIPLNKR-CDGAGFDPLGINSDASFGLNAAWENVLXX 1667
            T  CRASF++  +P S   T     P N   C+G+ FDPLGIN+D   G+NAAWE++L  
Sbjct: 44   TCACRASFSLQNRPTSSTTTTTTTKPWNTNSCEGSVFDPLGINTDEYSGVNAAWESILAL 103

Query: 1666 XXXXXXXXXXXXXXXXXXRGVAASIEDSSIDFGDXXXXXXXXXXXXXXXXLALSRLGIYV 1487
                              RGVAA+IEDSSIDFGD                LALSRLGIY+
Sbjct: 104  LSPIFESASSTKRDKPSARGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGIYI 163

Query: 1486 PLGGVNRDAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQVYPK 1307
            PLGGVNRDAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINA IVFQLL QVYPK
Sbjct: 164  PLGGVNRDAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPK 223

Query: 1306 LQELQKKEGEAGRKKILQYTRYASVGFAVVQAIGQVLYLRPYVNDFSTQWXXXXXXXXXX 1127
            LQ+LQK+EGEAGRKKILQYTRYASVGFA+VQAIGQVLYLRPYVNDFSTQW          
Sbjct: 224  LQDLQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTQWVLSSVTLLTL 283

Query: 1126 XXXXXTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAEAFQDGNYIGXXXXXXXX 947
                 TY+GER +DLKLGNGTSLLIFTSIISYLPASFGRT A+AFQDGNY+G        
Sbjct: 284  GSVFTTYLGERTSDLKLGNGTSLLIFTSIISYLPASFGRTVAQAFQDGNYVGLATIIISF 343

Query: 946  XXXXXXXVYVQEAERKIPLNYASRYSSKSGGLQKSAYLPFKVNSSGVMPIIFSTSSLALP 767
                   VYVQEAERKIPLNYASRY+S++GGLQKSAYLPFKVNSSGVMPIIFSTSSLALP
Sbjct: 344  FLLVLGIVYVQEAERKIPLNYASRYTSRTGGLQKSAYLPFKVNSSGVMPIIFSTSSLALP 403

Query: 766  GTLARFTGIAALKKAAVSLNPGGALYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGA 587
            GTLARFTGI+ALKKAAV+LNPGGA YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGA
Sbjct: 404  GTLARFTGISALKKAAVALNPGGAFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGA 463

Query: 586  SIPLVRPGKSTAAFIKTVLSRISVLGSAFLAVLAAGPAVIEQTTHLTAFRGFAGTSVLIL 407
            SIP VRPGKSTAAF+KTVLSRISVLGS FLA+LAAGPAV+EQ THLTAFRGFAGTSVLIL
Sbjct: 464  SIPQVRPGKSTAAFLKTVLSRISVLGSGFLAILAAGPAVVEQITHLTAFRGFAGTSVLIL 523

Query: 406  VGCATDTARKVQAEIISQKYKNIEFYDID 320
            VGCATDTARKVQAEIISQKYKNIEFYDID
Sbjct: 524  VGCATDTARKVQAEIISQKYKNIEFYDID 552


>ref|XP_002262945.2| PREDICTED: preprotein translocase subunit secY, chloroplastic-like
            [Vitis vinifera]
          Length = 546

 Score =  723 bits (1866), Expect = 0.0
 Identities = 384/509 (75%), Positives = 416/509 (81%), Gaps = 4/509 (0%)
 Frame = -1

Query: 1831 SVCRASFTVDRKPHST---WKVDIPLNKRCDGAGFDPLGINSDASFGLNAAWENVLXXXX 1661
            SV RASF V  KP+ST   W + +  N  C G  FDPLGI+SD S GLNA WE+ L    
Sbjct: 36   SVSRASFAVHTKPNSTPNSWNLALFCNS-CKGPVFDPLGIDSDKSLGLNATWESALGLLS 94

Query: 1660 XXXXXXXXXXXXXXXXR-GVAASIEDSSIDFGDXXXXXXXXXXXXXXXXLALSRLGIYVP 1484
                              GVAA+IEDSSIDFGD                LALSRLG+YVP
Sbjct: 95   QTFGSTSSTKKDKSASGQGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGLLALSRLGVYVP 154

Query: 1483 LGGVNRDAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQVYPKL 1304
            LGGVNR+AFVGNLDQNSLL+TLDSFSGGGIGRLGICSLGIVPFINA IVFQLLTQ+YPKL
Sbjct: 155  LGGVNREAFVGNLDQNSLLTTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLTQIYPKL 214

Query: 1303 QELQKKEGEAGRKKILQYTRYASVGFAVVQAIGQVLYLRPYVNDFSTQWXXXXXXXXXXX 1124
            Q+LQK+EGE GRKK+LQYTRYASVGFA+VQAIGQVL+LRPYVNDFSTQW           
Sbjct: 215  QDLQKREGETGRKKVLQYTRYASVGFALVQAIGQVLFLRPYVNDFSTQWVLSSVTLLTLG 274

Query: 1123 XXXXTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAEAFQDGNYIGXXXXXXXXX 944
                TYIGERI+DLKLGNGTSLLIFTSIISYLPASFGRT A+AFQDGNYIG         
Sbjct: 275  SVLTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAQAFQDGNYIGLVIIIISFF 334

Query: 943  XXXXXXVYVQEAERKIPLNYASRYSSKSGGLQKSAYLPFKVNSSGVMPIIFSTSSLALPG 764
                  VYVQEAERKIPLNYASRY++++GGLQKSAYLPFKVNSSGVMPIIFSTSSLALPG
Sbjct: 335  LLVLGIVYVQEAERKIPLNYASRYTNRTGGLQKSAYLPFKVNSSGVMPIIFSTSSLALPG 394

Query: 763  TLARFTGIAALKKAAVSLNPGGALYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGAS 584
            T++RFTG+AALKKAA++LNPGG+LYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGAS
Sbjct: 395  TVSRFTGLAALKKAALALNPGGSLYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGAS 454

Query: 583  IPLVRPGKSTAAFIKTVLSRISVLGSAFLAVLAAGPAVIEQTTHLTAFRGFAGTSVLILV 404
            IPLVRPGKSTAAFIK VLSRISVLGS FLA+LAAGP+++EQTTHLTAFRGFAGTSVLILV
Sbjct: 455  IPLVRPGKSTAAFIKMVLSRISVLGSGFLAILAAGPSLVEQTTHLTAFRGFAGTSVLILV 514

Query: 403  GCATDTARKVQAEIISQKYKNIEFYDIDK 317
            GCATDTARKVQAEIISQKYKNIEFYDID+
Sbjct: 515  GCATDTARKVQAEIISQKYKNIEFYDIDR 543


>ref|XP_003527188.1| PREDICTED: preprotein translocase subunit secY, chloroplastic-like
            [Glycine max]
          Length = 540

 Score =  715 bits (1846), Expect = 0.0
 Identities = 375/509 (73%), Positives = 411/509 (80%), Gaps = 1/509 (0%)
 Frame = -1

Query: 1840 RTTSVCRASFTVDRKPHSTWKVDIPLNKRCDGAGFDPLGINSDASFGLNAAWEN-VLXXX 1664
            +TTS+C+ASF+V R+P  +W     L+   + A FDPLGINSD S GLN+ W+N V    
Sbjct: 32   KTTSICQASFSVQRRPTHSWNTR-HLSTSSELANFDPLGINSDLSSGLNSTWKNLVCSIT 90

Query: 1663 XXXXXXXXXXXXXXXXXRGVAASIEDSSIDFGDXXXXXXXXXXXXXXXXLALSRLGIYVP 1484
                             +GVAA+IEDSSIDFGD                LALSRLG+Y+P
Sbjct: 91   QTFESTSSAEKGKPNSSQGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGVYIP 150

Query: 1483 LGGVNRDAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQVYPKL 1304
            LGGVNR+AFVGNLDQNSLLSTLDSFSGGGIGRLG+CSLGIVPFINA IVFQLL QVYPKL
Sbjct: 151  LGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGVCSLGIVPFINAQIVFQLLAQVYPKL 210

Query: 1303 QELQKKEGEAGRKKILQYTRYASVGFAVVQAIGQVLYLRPYVNDFSTQWXXXXXXXXXXX 1124
            Q+LQK+EGEAGRKK+LQYTRYASVGFA+VQAIGQVL+LRPYVNDFST+W           
Sbjct: 211  QDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLFLRPYVNDFSTEWVISSVILLTLG 270

Query: 1123 XXXXTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAEAFQDGNYIGXXXXXXXXX 944
                 YIGERITDLKLGNGTSLLIFT+IISYLPASFGRT A+AF D NYIG         
Sbjct: 271  SVFTMYIGERITDLKLGNGTSLLIFTNIISYLPASFGRTIAQAFNDANYIGLGTIVLSFF 330

Query: 943  XXXXXXVYVQEAERKIPLNYASRYSSKSGGLQKSAYLPFKVNSSGVMPIIFSTSSLALPG 764
                  VYVQEAERKIPLNYASR++S+S GL+KSAYLPFKVNSSGVMPIIFSTSSLALPG
Sbjct: 331  LLVVGIVYVQEAERKIPLNYASRFTSRSTGLEKSAYLPFKVNSSGVMPIIFSTSSLALPG 390

Query: 763  TLARFTGIAALKKAAVSLNPGGALYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGAS 584
            TLARFTG+ ALKKAAV+LNPGG+ YLP NILLIAFFNYYYTFLQLDPDDVSEQLKRQGAS
Sbjct: 391  TLARFTGLTALKKAAVALNPGGSFYLPFNILLIAFFNYYYTFLQLDPDDVSEQLKRQGAS 450

Query: 583  IPLVRPGKSTAAFIKTVLSRISVLGSAFLAVLAAGPAVIEQTTHLTAFRGFAGTSVLILV 404
            IPLVRPG++TA FIKTVLSRISVLGS FLA+LAAGPAV+EQ THLTAFRGFAGTS+LILV
Sbjct: 451  IPLVRPGRTTATFIKTVLSRISVLGSTFLAILAAGPAVVEQITHLTAFRGFAGTSILILV 510

Query: 403  GCATDTARKVQAEIISQKYKNIEFYDIDK 317
            GCATDTARKVQAEIISQKYKNIEFYD DK
Sbjct: 511  GCATDTARKVQAEIISQKYKNIEFYDFDK 539


>emb|CBI24093.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  712 bits (1838), Expect = 0.0
 Identities = 384/539 (71%), Positives = 417/539 (77%), Gaps = 34/539 (6%)
 Frame = -1

Query: 1831 SVCRASFTVDRKPHST---WKVDIPLNKR------------------------------C 1751
            SV RASF V  KP+ST   W + +  N+                               C
Sbjct: 36   SVSRASFAVHTKPNSTPNSWNLALFCNRTFCGKKILRPTMIIYIPLDVSPNMINMDSSFC 95

Query: 1750 DGAGFDPLGINSDASFGLNAAWENVLXXXXXXXXXXXXXXXXXXXXR-GVAASIEDSSID 1574
             G  FDPLGI+SD S GLNA WE+ L                      GVAA+IEDSSID
Sbjct: 96   KGPVFDPLGIDSDKSLGLNATWESALGLLSQTFGSTSSTKKDKSASGQGVAAAIEDSSID 155

Query: 1573 FGDXXXXXXXXXXXXXXXXLALSRLGIYVPLGGVNRDAFVGNLDQNSLLSTLDSFSGGGI 1394
            FGD                LALSRLG+YVPLGGVNR+AFVGNLDQNSLL+TLDSFSGGGI
Sbjct: 156  FGDFFKGPLPGKFLKLLGLLALSRLGVYVPLGGVNREAFVGNLDQNSLLTTLDSFSGGGI 215

Query: 1393 GRLGICSLGIVPFINASIVFQLLTQVYPKLQELQKKEGEAGRKKILQYTRYASVGFAVVQ 1214
            GRLGICSLGIVPFINA IVFQLLTQ+YPKLQ+LQK+EGE GRKK+LQYTRYASVGFA+VQ
Sbjct: 216  GRLGICSLGIVPFINAQIVFQLLTQIYPKLQDLQKREGETGRKKVLQYTRYASVGFALVQ 275

Query: 1213 AIGQVLYLRPYVNDFSTQWXXXXXXXXXXXXXXXTYIGERITDLKLGNGTSLLIFTSIIS 1034
            AIGQVL+LRPYVNDFSTQW               TYIGERI+DLKLGNGTSLLIFTSIIS
Sbjct: 276  AIGQVLFLRPYVNDFSTQWVLSSVTLLTLGSVLTTYIGERISDLKLGNGTSLLIFTSIIS 335

Query: 1033 YLPASFGRTAAEAFQDGNYIGXXXXXXXXXXXXXXXVYVQEAERKIPLNYASRYSSKSGG 854
            YLPASFGRT A+AFQDGNYIG               VYVQEAERKIPLNYASRY++++GG
Sbjct: 336  YLPASFGRTVAQAFQDGNYIGLVIIIISFFLLVLGIVYVQEAERKIPLNYASRYTNRTGG 395

Query: 853  LQKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVSLNPGGALYLPTNI 674
            LQKSAYLPFKVNSSGVMPIIFSTSSLALPGT++RFTG+AALKKAA++LNPGG+LYLPTNI
Sbjct: 396  LQKSAYLPFKVNSSGVMPIIFSTSSLALPGTVSRFTGLAALKKAALALNPGGSLYLPTNI 455

Query: 673  LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFIKTVLSRISVLGSAFLA 494
            LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFIK VLSRISVLGS FLA
Sbjct: 456  LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFIKMVLSRISVLGSGFLA 515

Query: 493  VLAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDK 317
            +LAAGP+++EQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDID+
Sbjct: 516  ILAAGPSLVEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDR 574


>ref|XP_002886190.1| hypothetical protein ARALYDRAFT_480774 [Arabidopsis lyrata subsp.
            lyrata] gi|297332030|gb|EFH62449.1| hypothetical protein
            ARALYDRAFT_480774 [Arabidopsis lyrata subsp. lyrata]
          Length = 549

 Score =  707 bits (1825), Expect = 0.0
 Identities = 381/518 (73%), Positives = 412/518 (79%), Gaps = 7/518 (1%)
 Frame = -1

Query: 1840 RTTSVCRASFTVDRKPHST-----WKVDIPLNKRCDGAG-FDPLGINSDASFGLNAAWEN 1679
            R++S+ RASF+V  K  +T     W + + +N R   A  FDPLGIN D + GL++ WE+
Sbjct: 32   RSSSLYRASFSVSTKTRNTCKAKSWNLGLVINSRSSEASVFDPLGINPDETSGLSSIWES 91

Query: 1678 -VLXXXXXXXXXXXXXXXXXXXXRGVAASIEDSSIDFGDXXXXXXXXXXXXXXXXLALSR 1502
             V                     RGVAA+IEDSSIDFGD                LALSR
Sbjct: 92   FVSLLSPSYESSSGSKRDKPSSGRGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSR 151

Query: 1501 LGIYVPLGGVNRDAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLT 1322
            LGIY+PLGGVNR+AFVGNLDQNS+LSTLD+FSGGGIGRLGICSLGIVPFINA IVFQLL 
Sbjct: 152  LGIYIPLGGVNREAFVGNLDQNSILSTLDTFSGGGIGRLGICSLGIVPFINAQIVFQLLA 211

Query: 1321 QVYPKLQELQKKEGEAGRKKILQYTRYASVGFAVVQAIGQVLYLRPYVNDFSTQWXXXXX 1142
            QVYPKLQ+LQKKEGEAGRKKILQYTRYASVGFA+VQAIGQV YLRPYVNDFST+W     
Sbjct: 212  QVYPKLQDLQKKEGEAGRKKILQYTRYASVGFAIVQAIGQVFYLRPYVNDFSTEWAISSV 271

Query: 1141 XXXXXXXXXXTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAEAFQDGNYIGXXX 962
                      TYIGERI+DLKLGNGTSLLIFTSIISYLPASFGRTAAEA Q+GNY G   
Sbjct: 272  TLLSLGSVLTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTAAEALQEGNYTGLAT 331

Query: 961  XXXXXXXXXXXXVYVQEAERKIPLNYASRYSSKSGGLQKSAYLPFKVNSSGVMPIIFSTS 782
                        VYVQEAERKIPLNYASRY+SK+GGLQKSAYLPFKVNS+GVMPIIFSTS
Sbjct: 332  IVVSFLLLVLGIVYVQEAERKIPLNYASRYTSKAGGLQKSAYLPFKVNSAGVMPIIFSTS 391

Query: 781  SLALPGTLARFTGIAALKKAAVSLNPGGALYLPTNILLIAFFNYYYTFLQLDPDDVSEQL 602
            SLALP TLARFTGI+ALK  A +LNPGG+ YLPTNILLIAFFNYYYTFLQLDPDDVSEQL
Sbjct: 392  SLALPATLARFTGISALKNVAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQL 451

Query: 601  KRQGASIPLVRPGKSTAAFIKTVLSRISVLGSAFLAVLAAGPAVIEQTTHLTAFRGFAGT 422
            KRQGASIPLVRPGKSTA FIKTVL RISVLGSAFLAVLAAGPAV+EQ THLTAFRGFAGT
Sbjct: 452  KRQGASIPLVRPGKSTALFIKTVLGRISVLGSAFLAVLAAGPAVVEQITHLTAFRGFAGT 511

Query: 421  SVLILVGCATDTARKVQAEIISQKYKNIEFYDIDK*SP 308
            SVLILVGCATDTARKVQAEIISQKYKNIEFY++DK  P
Sbjct: 512  SVLILVGCATDTARKVQAEIISQKYKNIEFYELDKYDP 549