BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022338
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]   200   2e-49
ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|2...   190   2e-46
ref|NP_186914.2| pentatricopeptide repeat-containing protein [Ar...   190   2e-46
gb|AAF32472.1| hypothetical protein [Arabidopsis thaliana]            190   2e-46
ref|XP_002882245.1| predicted protein [Arabidopsis lyrata subsp....   189   5e-46

>emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]
          Length = 549

 Score =  200 bits (509), Expect = 2e-49
 Identities = 101/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
 Frame = +3

Query: 3   PDSAVFNSIINGLSKVGNLDEAMGLLKVMESRGLRPNVSTYSVLISGYVKGGQMDEARSL 182
           P +AVFN +INGLSK G ++EAM ++K+ME+RGL+P+V TYSV++SGY  GG M+EA  +
Sbjct: 380 PGNAVFNFVINGLSKAGEMEEAMKMMKLMETRGLKPDVYTYSVIMSGYAHGGMMEEACRV 439

Query: 183 LSEAKKKHAKLYPVTFLILARGYCKLQEFDKAVELLIEMKDYGVYPNDEEYNKMIQSLCT 362
           LSEAK+ H+KL PVT+  L RGYCKL++FDKAVELL EMK++GV PN +EYNK+IQSLC 
Sbjct: 440 LSEAKRNHSKLSPVTYHTLIRGYCKLEQFDKAVELLGEMKEHGVQPNTDEYNKLIQSLCL 499

Query: 363 PKGLDWRTADKLFEDMEEKGVSLSGMNYHLIRTIKRWEEL-RSTAEGDEEA 512
            K LDW+TA+KL E+M++ G+ L+G+   LIR +K  EE  R+T E   EA
Sbjct: 500 -KALDWQTAEKLLEEMKQNGLHLNGITRGLIRAVKELEEEGRATEELRVEA 549


>ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|222847615|gb|EEE85162.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  190 bits (483), Expect = 2e-46
 Identities = 93/159 (58%), Positives = 125/159 (78%)
 Frame = +3

Query: 3   PDSAVFNSIINGLSKVGNLDEAMGLLKVMESRGLRPNVSTYSVLISGYVKGGQMDEARSL 182
           P +AVFN++I+G  K G++ EA+ ++K+MESRGL+P+V TY+V+ISGY  GGQM+EA  +
Sbjct: 308 PGNAVFNTVISGYCKGGDMKEAIEIMKLMESRGLKPDVYTYTVIISGYSNGGQMEEACYI 367

Query: 183 LSEAKKKHAKLYPVTFLILARGYCKLQEFDKAVELLIEMKDYGVYPNDEEYNKMIQSLCT 362
           LSEAKKKH+KL PVT+  L RGYCKL +FDKA+ELL EM+ +GV PN +EYNK+IQSLC 
Sbjct: 368 LSEAKKKHSKLSPVTYHALIRGYCKLDQFDKALELLAEMEKFGVQPNADEYNKLIQSLCL 427

Query: 363 PKGLDWRTADKLFEDMEEKGVSLSGMNYHLIRTIKRWEE 479
            K LDW TA+KLF +M+EKG+ L+ +   LI  +K  E+
Sbjct: 428 -KSLDWGTAEKLFAEMKEKGLYLNSITRSLITAVKELEQ 465


>ref|NP_186914.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546752|sp|P0C896.1|PP209_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g02650, mitochondrial; Flags: Precursor
           gi|332640323|gb|AEE73844.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 576

 Score =  190 bits (483), Expect = 2e-46
 Identities = 93/168 (55%), Positives = 129/168 (76%), Gaps = 1/168 (0%)
 Frame = +3

Query: 3   PDSAVFNSIINGLSKVGNLDEAMGLLKVMESRGLRPNVSTYSVLISGYVKGGQMDEARSL 182
           P +AVFN +++  SK G+LDEA  +LK+MESRGL+P+V TY+V+ISGY KGG MDEA+ +
Sbjct: 405 PGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEI 464

Query: 183 LSEAKKKHAKLYPVTFLILARGYCKLQEFDKAVELLIEMKDYGVYPNDEEYNKMIQSLCT 362
           L+EAKKKH KL PVT+  L RGYCK++E+D+A++LL EM  +GV PN +EYNK+IQS C 
Sbjct: 465 LAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCL 524

Query: 363 PKGLDWRTADKLFEDMEEKGVSLSGMNYHLIRTIKRWE-ELRSTAEGD 503
            K LDW  A+ LFE+M++KG+ L+ ++  LIR +K  E E + T +G+
Sbjct: 525 -KALDWEKAEVLFEEMKQKGLHLNAISQGLIRAVKEMESEAKVTEDGN 571


>gb|AAF32472.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1077

 Score =  190 bits (483), Expect = 2e-46
 Identities = 93/168 (55%), Positives = 129/168 (76%), Gaps = 1/168 (0%)
 Frame = +3

Query: 3    PDSAVFNSIINGLSKVGNLDEAMGLLKVMESRGLRPNVSTYSVLISGYVKGGQMDEARSL 182
            P +AVFN +++  SK G+LDEA  +LK+MESRGL+P+V TY+V+ISGY KGG MDEA+ +
Sbjct: 906  PGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEI 965

Query: 183  LSEAKKKHAKLYPVTFLILARGYCKLQEFDKAVELLIEMKDYGVYPNDEEYNKMIQSLCT 362
            L+EAKKKH KL PVT+  L RGYCK++E+D+A++LL EM  +GV PN +EYNK+IQS C 
Sbjct: 966  LAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCL 1025

Query: 363  PKGLDWRTADKLFEDMEEKGVSLSGMNYHLIRTIKRWE-ELRSTAEGD 503
             K LDW  A+ LFE+M++KG+ L+ ++  LIR +K  E E + T +G+
Sbjct: 1026 -KALDWEKAEVLFEEMKQKGLHLNAISQGLIRAVKEMESEAKVTEDGN 1072


>ref|XP_002882245.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297328085|gb|EFH58504.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1091

 Score =  189 bits (480), Expect = 5e-46
 Identities = 92/167 (55%), Positives = 125/167 (74%)
 Frame = +3

Query: 3    PDSAVFNSIINGLSKVGNLDEAMGLLKVMESRGLRPNVSTYSVLISGYVKGGQMDEARSL 182
            P +AVFN I++  SK G+LDEA  +LK+MESRGL+P+V TY+V+ISGY KGG M+EA+ +
Sbjct: 920  PGNAVFNLIVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMNEAQEI 979

Query: 183  LSEAKKKHAKLYPVTFLILARGYCKLQEFDKAVELLIEMKDYGVYPNDEEYNKMIQSLCT 362
            L+EAKKKH KL PVT+  L RGYCK++E+D+A++LL EM  +GV PN +EYNK+IQS C 
Sbjct: 980  LAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLKEMDRFGVQPNADEYNKLIQSFCL 1039

Query: 363  PKGLDWRTADKLFEDMEEKGVSLSGMNYHLIRTIKRWEELRSTAEGD 503
             K LDW  A+ LFE+M++KG+ L+ ++  LIR +K  E      E D
Sbjct: 1040 -KALDWEKAEVLFEEMKQKGLHLNAISQGLIRAVKEMESEAKVTEDD 1085