BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022337
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528372.1| PREDICTED: cyclin-A2-4-like [Glycine max]          65   6e-09
ref|XP_002517534.1| cyclin A, putative [Ricinus communis] gi|223...    62   4e-08
ref|NP_001233768.1| cyclin A2 [Solanum lycopersicum] gi|5420276|...    61   1e-07
dbj|BAA09367.1| A-type cyclin [Nicotiana tabacum]                      60   1e-07
ref|XP_002280592.1| PREDICTED: cyclin-A2-4 [Vitis vinifera] gi|2...    59   5e-07

>ref|XP_003528372.1| PREDICTED: cyclin-A2-4-like [Glycine max]
          Length = 482

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 14/131 (10%)
 Frame = -3

Query: 369 QNKRRTVLKDVTNVLCENSYKSCMNVAKIQPRNCKQALKSHVKKDSRVAPAVSEEAQQIK 190
           Q KR+ VL++VTNV CEN+YK+C+N   IQ R  K A    +   S+VAP+V+ E +Q +
Sbjct: 63  QRKRKAVLQEVTNVCCENAYKACLNSTNIQARKSKLAKAGQINV-SKVAPSVTVEPRQFQ 121

Query: 189 -DKGEREKVEETDVAAVSVEIEQNE-------DNVEMKTAEESDKMGIVESPKI------ 52
            D   +E   +++    S+ +E NE       D  +     ES   GI   P I      
Sbjct: 122 VDSKAKETALQSEDTMCSINLENNELLQLNANDCSKDFRLPESQMSGISAHPLISQKKGL 181

Query: 51  MISVRKEENLP 19
            I+   ++NLP
Sbjct: 182 QIAADTKDNLP 192


>ref|XP_002517534.1| cyclin A, putative [Ricinus communis] gi|223543166|gb|EEF44698.1|
           cyclin A, putative [Ricinus communis]
          Length = 496

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/108 (34%), Positives = 63/108 (58%)
 Frame = -3

Query: 405 ASDENSSVPVTGQNKRRTVLKDVTNVLCENSYKSCMNVAKIQPRNCKQALKSHVKKDSRV 226
           A DEN++  +    KRR VL+DVTNV CE+SY+SC + AKIQ +N KQA K  +   S+V
Sbjct: 55  ALDENNTSAIDNA-KRRAVLRDVTNVCCESSYRSCFSAAKIQAKNGKQAKKGQLNV-SKV 112

Query: 225 APAVSEEAQQIKDKGEREKVEETDVAAVSVEIEQNEDNVEMKTAEESD 82
            P+ + E  +++   + + +++      S++ E   + +   T E+ +
Sbjct: 113 IPSRAAEPPRLQADSKIKVLQD------SIKTEPKSEVISSTTLEKDE 154


>ref|NP_001233768.1| cyclin A2 [Solanum lycopersicum] gi|5420276|emb|CAB46642.1| cyclin
           A2 [Solanum lycopersicum]
          Length = 475

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 36/94 (38%), Positives = 59/94 (62%)
 Frame = -3

Query: 393 NSSVPVTGQNKRRTVLKDVTNVLCENSYKSCMNVAKIQPRNCKQALKSHVKKDSRVAPAV 214
           NSS   + Q KRR VL+DVTNVLCEN Y +C+N +K Q +      K   K++S+V PA+
Sbjct: 51  NSSSTASQQPKRRAVLRDVTNVLCENPYMNCINGSKFQVK------KFSDKRNSKVTPAL 104

Query: 213 SEEAQQIKDKGEREKVEETDVAAVSVEIEQNEDN 112
             +  +++D+ E   +EE    A  V++E+++++
Sbjct: 105 LVKKPELEDRKE-SVIEE----AKMVKVEESQEH 133


>dbj|BAA09367.1| A-type cyclin [Nicotiana tabacum]
          Length = 493

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 40/98 (40%), Positives = 59/98 (60%), Gaps = 4/98 (4%)
 Frame = -3

Query: 405 ASDEN----SSVPVTGQNKRRTVLKDVTNVLCENSYKSCMNVAKIQPRNCKQALKSHVKK 238
           ASDEN    SS+    Q KRR VLKD+ NVL ENS+ +C+N +KIQ +      K   K+
Sbjct: 60  ASDENRPGTSSIATGVQPKRRAVLKDMKNVLHENSHMNCINGSKIQVK------KGSDKR 113

Query: 237 DSRVAPAVSEEAQQIKDKGEREKVEETDVAAVSVEIEQ 124
           +++  PAVS +  Q+++KG+ +  ++  V  V VE  Q
Sbjct: 114 NNKAKPAVSLKLSQLQEKGKEDIADK--VKKVKVEGSQ 149


>ref|XP_002280592.1| PREDICTED: cyclin-A2-4 [Vitis vinifera]
           gi|297743331|emb|CBI36198.3| unnamed protein product
           [Vitis vinifera]
          Length = 490

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/87 (36%), Positives = 47/87 (54%)
 Frame = -3

Query: 390 SSVPVTGQNKRRTVLKDVTNVLCENSYKSCMNVAKIQPRNCKQALKSHVKKDSRVAPAVS 211
           +S     Q K+R VLKDV N+ CEN Y +C++  KIQ RN KQA K  V    +VAP+V+
Sbjct: 63  ASATTAPQCKKRAVLKDVANICCENLYMNCIDATKIQKRNSKQARKGWVML-PKVAPSVT 121

Query: 210 EEAQQIKDKGEREKVEETDVAAVSVEI 130
            E   +    +    +E +   +  E+
Sbjct: 122 VEISLLSADPKATVAQEVEKQEIEPEV 148