BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022311
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545781.1| PREDICTED: signal recognition particle 54 kD...   217   9e-55
ref|XP_003528309.1| PREDICTED: signal recognition particle 54 kD...   213   1e-53
ref|XP_003543686.1| PREDICTED: signal recognition particle 54 kD...   213   2e-53
emb|CBI36349.3| unnamed protein product [Vitis vinifera]              212   2e-53
ref|XP_002517663.1| signal recognition particle 54 kD protein, p...   212   2e-53

>ref|XP_003545781.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
           [Glycine max]
          Length = 499

 Score =  217 bits (552), Expect = 9e-55
 Identities = 109/126 (86%), Positives = 119/126 (94%), Gaps = 1/126 (0%)
 Frame = -2

Query: 377 EFEVFDAKPFVSRLLGMGDLSGFMDKLQDVVPMDQQPELLEKLSEG-FTLRILYEQYQNL 201
           EFEVFD KPFVSRLLGMGD SGFMDK+Q+VVPMDQQPELL+KLSEG FTLRI+YEQ+QN+
Sbjct: 281 EFEVFDVKPFVSRLLGMGDWSGFMDKIQEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNI 340

Query: 200 LKMGPIGQVFSMLPGFSSELMPQGRENENQAKIKRCMTIMDSMTNEELDSVNTKLMNESR 21
           LKMGPIGQVFSMLPGFS+ELMP+GRE E+QAKIKR MT+MDSMTNEELDS N KLMNESR
Sbjct: 341 LKMGPIGQVFSMLPGFSAELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESR 400

Query: 20  MMRIAR 3
           MMRIAR
Sbjct: 401 MMRIAR 406


>ref|XP_003528309.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
           [Glycine max]
          Length = 495

 Score =  213 bits (543), Expect = 1e-53
 Identities = 108/126 (85%), Positives = 117/126 (92%), Gaps = 1/126 (0%)
 Frame = -2

Query: 377 EFEVFDAKPFVSRLLGMGDLSGFMDKLQDVVPMDQQPELLEKLSEG-FTLRILYEQYQNL 201
           EFEVFD KPFVSRLLGMGD SGFMDK+ +VVPMDQQPELL+KLSEG FTLRI+YEQ+QNL
Sbjct: 281 EFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNL 340

Query: 200 LKMGPIGQVFSMLPGFSSELMPQGRENENQAKIKRCMTIMDSMTNEELDSVNTKLMNESR 21
           LKMGPI QVFSMLPGFS+ELMP+GRE E+QAKIKR MT+MDSMTNEELDS N KLMNESR
Sbjct: 341 LKMGPISQVFSMLPGFSAELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESR 400

Query: 20  MMRIAR 3
           MMRIAR
Sbjct: 401 MMRIAR 406


>ref|XP_003543686.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
           [Glycine max]
          Length = 500

 Score =  213 bits (541), Expect = 2e-53
 Identities = 107/126 (84%), Positives = 117/126 (92%), Gaps = 1/126 (0%)
 Frame = -2

Query: 377 EFEVFDAKPFVSRLLGMGDLSGFMDKLQDVVPMDQQPELLEKLSEG-FTLRILYEQYQNL 201
           EFEVFD KPFVSRLLGMGD SGFMDK+ +VVPMDQQPELL+KLSEG FTLRI+YEQ+QN+
Sbjct: 281 EFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNI 340

Query: 200 LKMGPIGQVFSMLPGFSSELMPQGRENENQAKIKRCMTIMDSMTNEELDSVNTKLMNESR 21
           LKMGPI QVFSMLPGFS+ELMP+GRE E+QAKIKR MT+MDSMTNEELDS N KLMNESR
Sbjct: 341 LKMGPISQVFSMLPGFSAELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESR 400

Query: 20  MMRIAR 3
           MMRIAR
Sbjct: 401 MMRIAR 406


>emb|CBI36349.3| unnamed protein product [Vitis vinifera]
          Length = 431

 Score =  212 bits (540), Expect = 2e-53
 Identities = 106/126 (84%), Positives = 118/126 (93%), Gaps = 1/126 (0%)
 Frame = -2

Query: 377 EFEVFDAKPFVSRLLGMGDLSGFMDKLQDVVPMDQQPELLEKLSEG-FTLRILYEQYQNL 201
           EFEVFD KPFVSRLLGMGD SGFMDK+ +VVPMDQQPELL+KLSEG FTLRI+YEQ+QN+
Sbjct: 281 EFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNI 340

Query: 200 LKMGPIGQVFSMLPGFSSELMPQGRENENQAKIKRCMTIMDSMTNEELDSVNTKLMNESR 21
           LKMGPIGQVFSMLPGFS+ELMP+GRE E+QAKIKR MT+MDSMTNEELD+ N KLMNESR
Sbjct: 341 LKMGPIGQVFSMLPGFSAELMPKGREKESQAKIKRYMTMMDSMTNEELDTSNPKLMNESR 400

Query: 20  MMRIAR 3
           +MRIAR
Sbjct: 401 IMRIAR 406


>ref|XP_002517663.1| signal recognition particle 54 kD protein, putative [Ricinus
           communis] gi|223543295|gb|EEF44827.1| signal recognition
           particle 54 kD protein, putative [Ricinus communis]
          Length = 497

 Score =  212 bits (540), Expect = 2e-53
 Identities = 106/126 (84%), Positives = 118/126 (93%), Gaps = 1/126 (0%)
 Frame = -2

Query: 377 EFEVFDAKPFVSRLLGMGDLSGFMDKLQDVVPMDQQPELLEKLSEG-FTLRILYEQYQNL 201
           EFEVFD KPFVSRLLGMGD SGFMDK+ +VVPMDQQPELL+KLSEG FTLRI+YEQ+QN+
Sbjct: 281 EFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNI 340

Query: 200 LKMGPIGQVFSMLPGFSSELMPQGRENENQAKIKRCMTIMDSMTNEELDSVNTKLMNESR 21
           LKMGPIGQVFSMLPGFS+ELMP+GRE E+QAKIKR MT+MDSMTNEELDS N KLMN+SR
Sbjct: 341 LKMGPIGQVFSMLPGFSAELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSR 400

Query: 20  MMRIAR 3
           +MRIAR
Sbjct: 401 IMRIAR 406