BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022307
         (806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA84683.1| ATPase subunit I (chloroplast) [Nicotiana tabacum...    54   5e-10
ref|XP_002335728.1| predicted protein [Populus trichocarpa] gi|2...    52   3e-07
gb|AAZ03832.1| ATP synthase CF0 B chain [Ranunculus macranthus]        60   6e-07
ref|YP_001004172.1| ATP synthase CF0 subunit I [Ranunculus macra...    60   6e-07
gb|AFU96498.1| AtpF, partial (chloroplast) [Ixonanthes sp. CCD-2...    57   4e-06

>gb|AAA84683.1| ATPase subunit I (chloroplast) [Nicotiana tabacum]
           gi|224351|prf||1102209E ORF 5
          Length = 162

 Score = 53.5 bits (127), Expect(2) = 5e-10
 Identities = 27/34 (79%), Positives = 32/34 (94%)
 Frame = -1

Query: 104 RKQIILSTIRNSEELRGGAIEKLEKAKARLWKVK 3
           RKQ IL+TIRNSEELRGGAIE+LEKA++RL KV+
Sbjct: 34  RKQRILNTIRNSEELRGGAIEQLEKARSRLRKVE 67



 Score = 37.0 bits (84), Expect(2) = 5e-10
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = -2

Query: 202 MNRKIHVWFGKRSWNF 155
           MNRKIHVWFGK  WNF
Sbjct: 1   MNRKIHVWFGKGLWNF 16


>ref|XP_002335728.1| predicted protein [Populus trichocarpa] gi|222834616|gb|EEE73079.1|
           predicted protein [Populus trichocarpa]
          Length = 79

 Score = 51.6 bits (122), Expect(2) = 3e-07
 Identities = 33/57 (57%), Positives = 36/57 (63%), Gaps = 9/57 (15%)
 Frame = +1

Query: 154 KNSMISSRTKHESFDSFGSHA---QLLMGHSRI------PFLFM**AYPIFSVRIPK 297
           K SMI SRTKHESFDSFGSHA   QLLMG+S +      P LF       F +RIPK
Sbjct: 11  KTSMIPSRTKHESFDSFGSHAQLVQLLMGNSHLFFDWNEPILF-----SRFIIRIPK 62



 Score = 29.3 bits (64), Expect(2) = 3e-07
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +3

Query: 303 KLIVDPRLEYSEDSSD 350
           KLI +PR EYSEDSSD
Sbjct: 64  KLITNPRPEYSEDSSD 79


>gb|AAZ03832.1| ATP synthase CF0 B chain [Ranunculus macranthus]
          Length = 188

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 32/34 (94%), Positives = 32/34 (94%)
 Frame = -1

Query: 104 RKQIILSTIRNSEELRGGAIEKLEKAKARLWKVK 3
           RKQ ILSTIRNSEELRGGAIEKLEKAKARL KVK
Sbjct: 61  RKQRILSTIRNSEELRGGAIEKLEKAKARLRKVK 94


>ref|YP_001004172.1| ATP synthase CF0 subunit I [Ranunculus macranthus]
           gi|226694449|sp|A1XGM4.1|ATPF_RANMC RecName: Full=ATP
           synthase subunit b, chloroplastic; AltName: Full=ATP
           synthase F(0) sector subunit b; AltName: Full=ATPase
           subunit I gi|85540790|gb|ABC70742.1| ATP synthase CF0
           subunit I [Ranunculus macranthus]
          Length = 183

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 32/34 (94%), Positives = 32/34 (94%)
 Frame = -1

Query: 104 RKQIILSTIRNSEELRGGAIEKLEKAKARLWKVK 3
           RKQ ILSTIRNSEELRGGAIEKLEKAKARL KVK
Sbjct: 56  RKQRILSTIRNSEELRGGAIEKLEKAKARLRKVK 89


>gb|AFU96498.1| AtpF, partial (chloroplast) [Ixonanthes sp. CCD-2012]
          Length = 186

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 27/34 (79%), Positives = 32/34 (94%)
 Frame = -1

Query: 104 RKQIILSTIRNSEELRGGAIEKLEKAKARLWKVK 3
           RKQ IL+TIRNS+ELRGGAIE+LEKA+ RLWKV+
Sbjct: 56  RKQKILNTIRNSDELRGGAIEELEKARTRLWKVE 89