BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022295
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158500.1| PREDICTED: LOW QUALITY PROTEIN: probable spl...    84   1e-14
ref|XP_004138633.1| PREDICTED: probable splicing factor 3A subun...    84   1e-14
ref|XP_002278479.1| PREDICTED: probable splicing factor 3A subun...    84   2e-14
ref|XP_003546472.1| PREDICTED: probable splicing factor 3A subun...    83   3e-14
ref|XP_003534698.1| PREDICTED: probable splicing factor 3A subun...    83   3e-14

>ref|XP_004158500.1| PREDICTED: LOW QUALITY PROTEIN: probable splicing factor 3A subunit
           1-like [Cucumis sativus]
          Length = 809

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 52/97 (53%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
 Frame = -3

Query: 274 DPYHAYYQHRLTELRFXXXXXXXXXXXXXXXSAAASC----TTDGNETVADVDATLAGP- 110
           DPYH YYQHRL+E R                 A AS     T D NET+A      A P 
Sbjct: 102 DPYHGYYQHRLSEFRAQNQSSAQQPSQGADSVAPASAPSGPTADNNETIA------AKPD 155

Query: 109 -SARFGLVRRALEPPECEQYTVRHPEGITGEELDIIK 2
            SA F  VR+ LEPPE EQYTVR PEGITGEELDIIK
Sbjct: 156 VSALFKPVRKVLEPPEAEQYTVRLPEGITGEELDIIK 192


>ref|XP_004138633.1| PREDICTED: probable splicing factor 3A subunit 1-like [Cucumis
           sativus]
          Length = 809

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 52/97 (53%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
 Frame = -3

Query: 274 DPYHAYYQHRLTELRFXXXXXXXXXXXXXXXSAAASC----TTDGNETVADVDATLAGP- 110
           DPYH YYQHRL+E R                 A AS     T D NET+A      A P 
Sbjct: 102 DPYHGYYQHRLSEFRAQNQSSAQQPSQGADSVAPASAPSGPTADNNETIA------AKPD 155

Query: 109 -SARFGLVRRALEPPECEQYTVRHPEGITGEELDIIK 2
            SA F  VR+ LEPPE EQYTVR PEGITGEELDIIK
Sbjct: 156 VSALFKPVRKVLEPPEAEQYTVRLPEGITGEELDIIK 192


>ref|XP_002278479.1| PREDICTED: probable splicing factor 3A subunit 1-like [Vitis
           vinifera]
          Length = 814

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 50/96 (52%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
 Frame = -3

Query: 274 DPYHAYYQHRLTELRFXXXXXXXXXXXXXXXSAAASCT-----TDGNETVADVDATLAGP 110
           DPYHAYYQHRL+E R                S+A          D +ETV   D     P
Sbjct: 106 DPYHAYYQHRLSEFRSQNQSSAQQPPSQPADSSAPESAPSAPHADNSETVVKPD-----P 160

Query: 109 SARFGLVRRALEPPECEQYTVRHPEGITGEELDIIK 2
           SA+F  VR+ LEPPE EQYTVR PEGITGEELDIIK
Sbjct: 161 SAQFKPVRKVLEPPETEQYTVRLPEGITGEELDIIK 196


>ref|XP_003546472.1| PREDICTED: probable splicing factor 3A subunit 1-like [Glycine max]
          Length = 802

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 49/93 (52%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
 Frame = -3

Query: 274 DPYHAYYQHRLTELRFXXXXXXXXXXXXXXXSAAASCTTDGNETVADVDATLAGP--SAR 101
           DPYHAYYQHRL+E R                +   S  +D N  VA   A    P  SA+
Sbjct: 102 DPYHAYYQHRLSEFR-AQNQSSGQQQPADSAAVPESVPSDSNGVVAAAAAAAEKPDFSAQ 160

Query: 100 FGLVRRALEPPECEQYTVRHPEGITGEELDIIK 2
           F  VR+ LEPPE EQYTVR PEGITGEELDIIK
Sbjct: 161 FKPVRKVLEPPEAEQYTVRLPEGITGEELDIIK 193


>ref|XP_003534698.1| PREDICTED: probable splicing factor 3A subunit 1-like [Glycine max]
          Length = 806

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 49/93 (52%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
 Frame = -3

Query: 274 DPYHAYYQHRLTELRFXXXXXXXXXXXXXXXSAAASCTTDGNETVADVDATLAGP--SAR 101
           DPYHAYYQHRL+E R                +   S  +D N  VA   A    P  SA+
Sbjct: 105 DPYHAYYQHRLSEFR-AQNQSSGQQQPADSAAVPESVPSDSNGVVAAAAAAAEKPDFSAQ 163

Query: 100 FGLVRRALEPPECEQYTVRHPEGITGEELDIIK 2
           F  VR+ LEPPE EQYTVR PEGITGEELDIIK
Sbjct: 164 FKPVRKVLEPPEAEQYTVRLPEGITGEELDIIK 196