BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022290
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63131.1| Retrotransposon gag protein [Asparagus officinalis]     91   1e-16
gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]     88   8e-16
gb|ABD63157.1| Retrotransposon gag protein [Asparagus officinalis]     87   1e-15
gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]     81   8e-14
emb|CAN78493.1| hypothetical protein VITISV_037041 [Vitis vinifera]    79   5e-13

>gb|ABD63131.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 321

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 40/90 (44%), Positives = 60/90 (66%)
 Frame = -3

Query: 271 IKLQ*FSDEAIKLKLFPFSLKEKVKSWFHTLPSNSIMG*KKLCIMFLKNFFPNHKVTAFR 92
           IK++  +++AIKL+  PF+LK+K K W ++LP+NSI   ++   +FLK FFP HK    R
Sbjct: 67  IKMRELTEDAIKLRFIPFALKDKAKKWLYSLPTNSISTWEEFVTVFLKKFFPIHKTVKLR 126

Query: 91  KDLSSFCQNDGELLWKCIERFKDMLLQCPN 2
             + +F    GE  WK  +RFKD+L+QCP+
Sbjct: 127 NSIQNFKIVPGEPFWKYFDRFKDLLIQCPH 156


>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 38/84 (45%), Positives = 56/84 (66%)
 Frame = -3

Query: 253 SDEAIKLKLFPFSLKEKVKSWFHTLPSNSIMG*KKLCIMFLKNFFPNHKVTAFRKDLSSF 74
           +++AIKL+  PF+LK+K K W ++LP+NSI   ++   +FLK FFP HK    R  + +F
Sbjct: 5   TEDAIKLRFIPFALKDKAKKWLYSLPTNSISTWEEFVTVFLKKFFPIHKTVKLRNSIQNF 64

Query: 73  CQNDGELLWKCIERFKDMLLQCPN 2
               GE  WK  +RFKD+L+QCP+
Sbjct: 65  KIVPGEPFWKYFDRFKDLLIQCPH 88


>gb|ABD63157.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 279

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 38/90 (42%), Positives = 58/90 (64%)
 Frame = -3

Query: 271 IKLQ*FSDEAIKLKLFPFSLKEKVKSWFHTLPSNSIMG*KKLCIMFLKNFFPNHKVTAFR 92
           IK++  +++A+KL+  PF+LK+K K W ++LP+NSI    +   +FLK  FP HK    R
Sbjct: 69  IKMRELNEDAVKLRFIPFALKDKAKKWLYSLPTNSISTWDEFVTVFLKKIFPIHKTVKLR 128

Query: 91  KDLSSFCQNDGELLWKCIERFKDMLLQCPN 2
             + +F    GE  WK  +RFKD+L+QCP+
Sbjct: 129 NSIQNFKIIPGEPFWKYFDRFKDLLIQCPH 158


>gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 275

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/84 (44%), Positives = 54/84 (64%)
 Frame = -3

Query: 253 SDEAIKLKLFPFSLKEKVKSWFHTLPSNSIMG*KKLCIMFLKNFFPNHKVTAFRKDLSSF 74
           SD+AIKL+LFPFSL++K ++W  +LP  SI    +L   FL  +FP  K    R  +++F
Sbjct: 5   SDDAIKLRLFPFSLRDKARAWLQSLPPGSITTWDQLSEAFLAKYFPPSKTAQLRNQITTF 64

Query: 73  CQNDGELLWKCIERFKDMLLQCPN 2
            Q +GE L+   ER+KD+L  CP+
Sbjct: 65  TQKEGESLYDAWERYKDLLRMCPH 88


>emb|CAN78493.1| hypothetical protein VITISV_037041 [Vitis vinifera]
          Length = 1048

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 38/84 (45%), Positives = 54/84 (64%)
 Frame = -3

Query: 253 SDEAIKLKLFPFSLKEKVKSWFHTLPSNSIMG*KKLCIMFLKNFFPNHKVTAFRKDLSSF 74
           +D+AI+L+LFPFSL  K K+W  +LP  +I     L   FL  +FP  K T  R D+++F
Sbjct: 28  TDDAIRLRLFPFSLNNKAKAWLISLPPGTITTWDGLVNAFLAKYFPLAKSTKMRNDITNF 87

Query: 73  CQNDGELLWKCIERFKDMLLQCPN 2
            Q D E L++  ERFKD+L +CP+
Sbjct: 88  LQQDQESLYEAWERFKDLLRKCPH 111