BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022289
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63131.1| Retrotransposon gag protein [Asparagus officinalis]    147   9e-34
gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]    144   7e-33
gb|ABD63157.1| Retrotransposon gag protein [Asparagus officinalis]    142   3e-32
gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]    120   9e-26
emb|CAN81952.1| hypothetical protein VITISV_022527 [Vitis vinifera]   110   9e-23

>gb|ABD63131.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 321

 Score =  147 bits (371), Expect = 9e-34
 Identities = 65/120 (54%), Positives = 88/120 (73%)
 Frame = -2

Query: 360 VKLQQFSEDAIKLKLFPFSLKEKAKSWFHTLPSNSIATWEKLCIVFLKNFFPNHKATAFR 181
           +K+++ +EDAIKL+  PF+LK+KAK W ++LP+NSI+TWE+   VFLK FFP HK    R
Sbjct: 67  IKMRELTEDAIKLRFIPFALKDKAKKWLYSLPTNSISTWEEFVTVFLKKFFPIHKTVKLR 126

Query: 180 KVISSFCQNEGESLWKCMERFKDILLQCPNHGLEKGRLVQIFYEGLDFNSKAMVETMSTG 1
             I +F    GE  WK  +RFKD+L+QCP+HGLEK RL Q+ YEGLD++SK  +E+M  G
Sbjct: 127 NSIQNFKIVPGEPFWKYFDRFKDLLIQCPHHGLEKWRLCQVIYEGLDYSSKTSLESMCQG 186


>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score =  144 bits (363), Expect = 7e-33
 Identities = 64/118 (54%), Positives = 86/118 (72%)
 Frame = -2

Query: 354 LQQFSEDAIKLKLFPFSLKEKAKSWFHTLPSNSIATWEKLCIVFLKNFFPNHKATAFRKV 175
           +++ +EDAIKL+  PF+LK+KAK W ++LP+NSI+TWE+   VFLK FFP HK    R  
Sbjct: 1   MRELTEDAIKLRFIPFALKDKAKKWLYSLPTNSISTWEEFVTVFLKKFFPIHKTVKLRNS 60

Query: 174 ISSFCQNEGESLWKCMERFKDILLQCPNHGLEKGRLVQIFYEGLDFNSKAMVETMSTG 1
           I +F    GE  WK  +RFKD+L+QCP+HGLEK RL Q+ YEGLD++SK  +E+M  G
Sbjct: 61  IQNFKIVPGEPFWKYFDRFKDLLIQCPHHGLEKWRLCQVIYEGLDYSSKTSLESMCQG 118


>gb|ABD63157.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 279

 Score =  142 bits (358), Expect = 3e-32
 Identities = 62/120 (51%), Positives = 87/120 (72%)
 Frame = -2

Query: 360 VKLQQFSEDAIKLKLFPFSLKEKAKSWFHTLPSNSIATWEKLCIVFLKNFFPNHKATAFR 181
           +K+++ +EDA+KL+  PF+LK+KAK W ++LP+NSI+TW++   VFLK  FP HK    R
Sbjct: 69  IKMRELNEDAVKLRFIPFALKDKAKKWLYSLPTNSISTWDEFVTVFLKKIFPIHKTVKLR 128

Query: 180 KVISSFCQNEGESLWKCMERFKDILLQCPNHGLEKGRLVQIFYEGLDFNSKAMVETMSTG 1
             I +F    GE  WK  +RFKD+L+QCP+HGLEK RL QI YEGLD+++K  +E+M  G
Sbjct: 129 NSIQNFKIIPGEPFWKYFDRFKDLLIQCPHHGLEKWRLCQIIYEGLDYSAKTSLESMCHG 188


>gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 275

 Score =  120 bits (302), Expect = 9e-26
 Identities = 54/114 (47%), Positives = 77/114 (67%)
 Frame = -2

Query: 342 SEDAIKLKLFPFSLKEKAKSWFHTLPSNSIATWEKLCIVFLKNFFPNHKATAFRKVISSF 163
           S+DAIKL+LFPFSL++KA++W  +LP  SI TW++L   FL  +FP  K    R  I++F
Sbjct: 5   SDDAIKLRLFPFSLRDKARAWLQSLPPGSITTWDQLSEAFLAKYFPPSKTAQLRNQITTF 64

Query: 162 CQNEGESLWKCMERFKDILLQCPNHGLEKGRLVQIFYEGLDFNSKAMVETMSTG 1
            Q EGESL+   ER+KD+L  CP+HGLE   ++  FY GL +N++  V+  + G
Sbjct: 65  TQKEGESLYDAWERYKDLLRMCPHHGLEDWLIIHTFYNGLLYNTRMTVDAAAGG 118


>emb|CAN81952.1| hypothetical protein VITISV_022527 [Vitis vinifera]
          Length = 2166

 Score =  110 bits (276), Expect = 9e-23
 Identities = 50/114 (43%), Positives = 72/114 (63%)
 Frame = -2

Query: 342 SEDAIKLKLFPFSLKEKAKSWFHTLPSNSIATWEKLCIVFLKNFFPNHKATAFRKVISSF 163
           S D ++LKLFPF+LK+KAK WF++L   SI TW  L   FLK FFP H+    ++ IS+F
Sbjct: 26  SIDLMRLKLFPFTLKDKAKIWFNSLRPRSIRTWTDLQAEFLKKFFPTHRTNGLKRQISNF 85

Query: 162 CQNEGESLWKCMERFKDILLQCPNHGLEKGRLVQIFYEGLDFNSKAMVETMSTG 1
              E E  ++C ER+ + +  CP+HG +   LV  FY+G+  + K ++ETM  G
Sbjct: 86  SAKENEKFYECWERYMEAINACPHHGFDTWLLVSYFYDGMSSSMKQLLETMCGG 139