BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022285
         (1104 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284030.1| PREDICTED: chloroplastic group IIB intron sp...   384   e-104
ref|XP_002305823.1| predicted protein [Populus trichocarpa] gi|2...   376   e-102
ref|XP_002516738.1| peptidyl-tRNA hydrolase, putative [Ricinus c...   365   1e-98
ref|NP_001239818.1| uncharacterized protein LOC100804132 [Glycin...   362   9e-98
ref|XP_004145630.1| PREDICTED: chloroplastic group IIB intron sp...   350   4e-94

>ref|XP_002284030.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
           CRS2, chloroplastic [Vitis vinifera]
           gi|296087264|emb|CBI33638.3| unnamed protein product
           [Vitis vinifera]
          Length = 246

 Score =  384 bits (985), Expect = e-104
 Identities = 184/246 (74%), Positives = 212/246 (86%), Gaps = 1/246 (0%)
 Frame = +2

Query: 104 MLHSVSAPNPCISIPSRRSIH-LTSRRLVATKIRVSASLPDVDTVKVEYTPWLIVGLGNP 280
           ML++VS P+  IS       H    RRL   ++ VSASLPD + +KVEYTPWLIVGLGNP
Sbjct: 1   MLYAVSGPSTSISCRRSLDYHGFRRRRLAPARLCVSASLPDANGIKVEYTPWLIVGLGNP 60

Query: 281 GNKYHGTRHNVGFEMIDRISEEEGIKLNTIQSKALMGIGSIGEVPVLLAKSQAYMNYSGE 460
           GNKYHGTRHNVGFEMIDRIS+EEGI LNTIQSKAL+GIGSIGEVP+LLAK QAYMN+SGE
Sbjct: 61  GNKYHGTRHNVGFEMIDRISQEEGILLNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGE 120

Query: 461 SVGPLAAYYQVPLRHILLIYDEMSLPNGVMRLQPKGGHGYHNGVKSVIDHLDGCKAFPRL 640
           SVGPLAAYYQVPLRHIL++YDEM+LPNGV+RL P+GGHGYHNG+K+V+ HLDGC+ FPRL
Sbjct: 121 SVGPLAAYYQVPLRHILVVYDEMNLPNGVLRLAPRGGHGYHNGLKNVMGHLDGCREFPRL 180

Query: 641 CIGIGNPPGTMDRKAYLLQKFSSEERKQVDIALEQAVEAVRNLLLKGFDDNITKFNLGQK 820
           CIGIGNPPGTMD KAYLLQKFS EERKQ+D A EQ + AVRNL+L GF+ + T+FNLGQK
Sbjct: 181 CIGIGNPPGTMDMKAYLLQKFSFEERKQIDAAQEQGIGAVRNLVLNGFNHSTTRFNLGQK 240

Query: 821 YKFHRV 838
           YK+H+V
Sbjct: 241 YKYHKV 246


>ref|XP_002305823.1| predicted protein [Populus trichocarpa] gi|222848787|gb|EEE86334.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  376 bits (966), Expect = e-102
 Identities = 180/246 (73%), Positives = 213/246 (86%), Gaps = 1/246 (0%)
 Frame = +2

Query: 104 MLHSVSAPNPCISIPSRRSIHLTSRRLVATKIRVSASLPD-VDTVKVEYTPWLIVGLGNP 280
           ML++VS P  CIS P  RS     R LV+ ++ V ASLPD  + VKVEYTPWLIVGLGNP
Sbjct: 1   MLYAVSTPRTCISCP--RSSRFHRRNLVSVRLCVRASLPDNANGVKVEYTPWLIVGLGNP 58

Query: 281 GNKYHGTRHNVGFEMIDRISEEEGIKLNTIQSKALMGIGSIGEVPVLLAKSQAYMNYSGE 460
           G KYHGTRHNVGFEMIDRI++ EG+ +NTIQSKAL+GIG IGEVP+LLAK QAYMN+SGE
Sbjct: 59  GTKYHGTRHNVGFEMIDRIAQAEGVLMNTIQSKALIGIGCIGEVPILLAKPQAYMNFSGE 118

Query: 461 SVGPLAAYYQVPLRHILLIYDEMSLPNGVMRLQPKGGHGYHNGVKSVIDHLDGCKAFPRL 640
           SVGPLAA+Y++PLRHILLIYDEM+LPNG++R+QPKGGHG+HNGVKSV+DHLDGC+ FPRL
Sbjct: 119 SVGPLAAHYKIPLRHILLIYDEMNLPNGILRVQPKGGHGHHNGVKSVMDHLDGCREFPRL 178

Query: 641 CIGIGNPPGTMDRKAYLLQKFSSEERKQVDIALEQAVEAVRNLLLKGFDDNITKFNLGQK 820
           CIGIGNPPGTMD KA+LLQKFS  ER+Q+D +LEQ VEA+R L+L GF + IT+FNLGQK
Sbjct: 179 CIGIGNPPGTMDMKAFLLQKFSPTEREQIDASLEQGVEAMRTLILGGFTNKITRFNLGQK 238

Query: 821 YKFHRV 838
           YK+H+V
Sbjct: 239 YKYHKV 244


>ref|XP_002516738.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
           gi|223544111|gb|EEF45636.1| peptidyl-tRNA hydrolase,
           putative [Ricinus communis]
          Length = 253

 Score =  365 bits (936), Expect = 1e-98
 Identities = 177/255 (69%), Positives = 210/255 (82%), Gaps = 10/255 (3%)
 Frame = +2

Query: 104 MLHSVSAPNPCISIPSRRSIHLTSRRLVATKIRVSASLPDVDT--VKVEYTPWLIVGLGN 277
           ML++VS PN CIS P  R+     R L +T++ +  SLP+      K+EYTPWLIVGLGN
Sbjct: 1   MLYAVSTPNTCISCP--RNSFFRPRHLASTRLSIRVSLPENGNGVAKIEYTPWLIVGLGN 58

Query: 278 PGNKYHGTRHNV--------GFEMIDRISEEEGIKLNTIQSKALMGIGSIGEVPVLLAKS 433
           PGNKYHGTRHNV        GFEMID+I++ E + +NTIQSKAL+GIG I EVP+LL K 
Sbjct: 59  PGNKYHGTRHNVTNASLDLVGFEMIDKIAKAEAVAMNTIQSKALIGIGCIKEVPILLVKP 118

Query: 434 QAYMNYSGESVGPLAAYYQVPLRHILLIYDEMSLPNGVMRLQPKGGHGYHNGVKSVIDHL 613
           QAYMN+SGESVGPLAA+YQVPLRHILLIYDEMSLPNGVMRLQPKGGHG+HNGVKSV++HL
Sbjct: 119 QAYMNFSGESVGPLAAHYQVPLRHILLIYDEMSLPNGVMRLQPKGGHGHHNGVKSVMEHL 178

Query: 614 DGCKAFPRLCIGIGNPPGTMDRKAYLLQKFSSEERKQVDIALEQAVEAVRNLLLKGFDDN 793
           DGC+ FPRLCIGIGNPPGTMD +A+LLQKFSS ER+Q+D AL Q ++AVR L+L GF+ N
Sbjct: 179 DGCREFPRLCIGIGNPPGTMDMRAFLLQKFSSTEREQIDAALGQGIDAVRTLVLSGFNQN 238

Query: 794 ITKFNLGQKYKFHRV 838
           IT+FNLGQKYK+H+V
Sbjct: 239 ITRFNLGQKYKYHKV 253


>ref|NP_001239818.1| uncharacterized protein LOC100804132 [Glycine max]
           gi|255645504|gb|ACU23247.1| unknown [Glycine max]
          Length = 244

 Score =  362 bits (929), Expect = 9e-98
 Identities = 172/245 (70%), Positives = 205/245 (83%)
 Frame = +2

Query: 104 MLHSVSAPNPCISIPSRRSIHLTSRRLVATKIRVSASLPDVDTVKVEYTPWLIVGLGNPG 283
           MLH+VSAP+ C+S P       +S +     +R S S    +  KVEYTPWLI+GLGNPG
Sbjct: 1   MLHAVSAPSFCLSYPGNLHYPPSSVQKTCFSVRCSVSQTK-NGAKVEYTPWLIIGLGNPG 59

Query: 284 NKYHGTRHNVGFEMIDRISEEEGIKLNTIQSKALMGIGSIGEVPVLLAKSQAYMNYSGES 463
           NKYHGTRHNVGFE+ID +S  EGI++NTIQSKAL+GIGSIGEVP+LLAK Q YMN+SGES
Sbjct: 60  NKYHGTRHNVGFEIIDSLSRAEGIQMNTIQSKALIGIGSIGEVPILLAKPQTYMNFSGES 119

Query: 464 VGPLAAYYQVPLRHILLIYDEMSLPNGVMRLQPKGGHGYHNGVKSVIDHLDGCKAFPRLC 643
           VGPLAAYYQVPLRHILL++DE SLPNGV+RLQPKGGHG+HNG+K+V+ HLDGC AFPRL 
Sbjct: 120 VGPLAAYYQVPLRHILLVFDETSLPNGVLRLQPKGGHGHHNGLKNVMGHLDGCSAFPRLA 179

Query: 644 IGIGNPPGTMDRKAYLLQKFSSEERKQVDIALEQAVEAVRNLLLKGFDDNITKFNLGQKY 823
           +GIGNPPGTMD +AYLLQKFS EERKQ+D +LEQAV AVR ++L GFD ++ +FNLGQKY
Sbjct: 180 VGIGNPPGTMDLRAYLLQKFSVEERKQIDASLEQAVAAVRTVVLNGFDQHVNRFNLGQKY 239

Query: 824 KFHRV 838
           K+H+V
Sbjct: 240 KYHKV 244


>ref|XP_004145630.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
           CRS2-B, chloroplastic-like [Cucumis sativus]
           gi|449519774|ref|XP_004166909.1| PREDICTED:
           chloroplastic group IIB intron splicing facilitator
           CRS2-B, chloroplastic-like [Cucumis sativus]
          Length = 249

 Score =  350 bits (898), Expect = 4e-94
 Identities = 166/225 (73%), Positives = 195/225 (86%), Gaps = 2/225 (0%)
 Frame = +2

Query: 170 TSRRLVATKIRVSASLPDVDT--VKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDRISE 343
           +++ LV+T++ V AS PD D+  +KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMID I++
Sbjct: 25  STKPLVSTRLSVRASSPDSDSNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQ 84

Query: 344 EEGIKLNTIQSKALMGIGSIGEVPVLLAKSQAYMNYSGESVGPLAAYYQVPLRHILLIYD 523
            +GI +NTIQSKAL+GIGSIGEVP+LLAK Q YMN+ GESVGPLAA+YQ+PLRH+LL YD
Sbjct: 85  AQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHVLLTYD 144

Query: 524 EMSLPNGVMRLQPKGGHGYHNGVKSVIDHLDGCKAFPRLCIGIGNPPGTMDRKAYLLQKF 703
           EM+LPNGV+RLQPK GHG+HNGVKSV+ HLDG + FPRLCIGIGNPPGTMD KA+LLQKF
Sbjct: 145 EMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKF 204

Query: 704 SSEERKQVDIALEQAVEAVRNLLLKGFDDNITKFNLGQKYKFHRV 838
           SS ERKQ+D ALEQ VEAVR L L GF   + +FNL QKYK+H+V
Sbjct: 205 SSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 249