BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022261
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL98862.1| DEAD-box ATP-dependent RNA helicase, partial [Sil...    67   2e-09
ref|XP_003626109.1| DEAD-box ATP-dependent RNA helicase [Medicag...    65   7e-09
ref|XP_003557638.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    65   7e-09
gb|AEL98861.1| DEAD-box ATP-dependent RNA helicase, partial [Sil...    64   1e-08
ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putativ...    64   2e-08

>gb|AEL98862.1| DEAD-box ATP-dependent RNA helicase, partial [Silene latifolia]
          Length = 782

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/68 (50%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
 Frame = +1

Query: 13  VVVGTPDLVALQFNADNLVLSDVESVVLYEAHEL--AGFDEDLKFILGKLPKKRQSMIFS 186
           VVVGTP  +    N ++L L +VE +VL EA ++   GF+ED++ IL KLPK+RQSM+FS
Sbjct: 254 VVVGTPGRIIDLVNGNSLKLGEVEFLVLDEADQMLAVGFEEDVEVILEKLPKERQSMLFS 313

Query: 187 SSMSTWLR 210
           ++M TW++
Sbjct: 314 ATMPTWIK 321


>ref|XP_003626109.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|87240993|gb|ABD32851.1| Helicase, C-terminal; Zinc
           finger, CCHC-type; GUCT [Medicago truncatula]
           gi|355501124|gb|AES82327.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 753

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 34/68 (50%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
 Frame = +1

Query: 13  VVVGTPDLVALQFNADNLVLSDVESVVLYEAHEL--AGFDEDLKFILGKLPKKRQSMIFS 186
           VVVGTP  +    N + L LS+VE +VL EA ++   GF+ED++ IL KLP KRQSM+FS
Sbjct: 235 VVVGTPGRLIDLINGNTLKLSEVEYLVLDEADQMLAVGFEEDVEVILEKLPAKRQSMLFS 294

Query: 187 SSMSTWLR 210
           ++M +W++
Sbjct: 295 ATMPSWVK 302


>ref|XP_003557638.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like
           [Brachypodium distachyon]
          Length = 604

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/68 (48%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
 Frame = +1

Query: 13  VVVGTPDLVALQFNADNLVLSDVESVVLYEAHEL--AGFDEDLKFILGKLPKKRQSMIFS 186
           VVVGTP  +       NL LS+++ VVL EA ++   GFDED++ I+ KLP+ RQSM+FS
Sbjct: 208 VVVGTPGRIIDLLRRGNLNLSEIQFVVLDEADQMLAVGFDEDVEVIMEKLPQNRQSMLFS 267

Query: 187 SSMSTWLR 210
           ++M +W+R
Sbjct: 268 ATMPSWIR 275


>gb|AEL98861.1| DEAD-box ATP-dependent RNA helicase, partial [Silene latifolia]
          Length = 782

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/68 (48%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
 Frame = +1

Query: 13  VVVGTPDLVALQFNADNLVLSDVESVVLYEAHEL--AGFDEDLKFILGKLPKKRQSMIFS 186
           VVVGTP  +    N  +L L +VE +VL EA ++   GF+ED++ IL  LPK+RQSM+FS
Sbjct: 254 VVVGTPGRIIDLINGKSLKLGEVEFLVLDEADQMLAVGFEEDVEVILETLPKERQSMLFS 313

Query: 187 SSMSTWLR 210
           ++M TW++
Sbjct: 314 ATMPTWIK 321


>ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223548563|gb|EEF50054.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 772

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/68 (48%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
 Frame = +1

Query: 13  VVVGTPDLVALQFNADNLVLSDVESVVLYEAHELA--GFDEDLKFILGKLPKKRQSMIFS 186
           VVVGTP  +    N+ +L L +VE +VL EA ++   GF+ED++ IL  LP KRQSM+FS
Sbjct: 247 VVVGTPGRIIDLINSGSLKLGEVEYLVLDEADQMLSFGFEEDVEVILENLPSKRQSMLFS 306

Query: 187 SSMSTWLR 210
           ++M TW++
Sbjct: 307 ATMPTWVK 314