BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022239
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324065.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22
emb|CBI36340.3| unnamed protein product [Vitis vinifera]              109   3e-22
ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22
ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containi...   106   2e-21
ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containi...    92   4e-17

>ref|XP_002324065.1| predicted protein [Populus trichocarpa] gi|222867067|gb|EEF04198.1|
           predicted protein [Populus trichocarpa]
          Length = 707

 Score =  109 bits (273), Expect = 2e-22
 Identities = 52/83 (62%), Positives = 68/83 (81%)
 Frame = -1

Query: 249 VIKLLKFSADTKNLKLGQTIHAHLLISTPNTQLNIIQTNSLIHLYVKCNQLSLARKLFDE 70
           +IKLLK SADTKNLK+G+TIH+HL++++  T+ +II+ NSLI+ Y K NQ+S+A  LFD 
Sbjct: 32  LIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDR 91

Query: 69  MPERNVVSWSSLMAGYFHSGGSL 1
           MPERNVVSWS+LM GY  +G SL
Sbjct: 92  MPERNVVSWSALMTGYLLNGFSL 114


>emb|CBI36340.3| unnamed protein product [Vitis vinifera]
          Length = 630

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/79 (65%), Positives = 65/79 (82%)
 Frame = -1

Query: 246 IKLLKFSADTKNLKLGQTIHAHLLISTPNTQLNIIQTNSLIHLYVKCNQLSLARKLFDEM 67
           I+LLK SADTKNLK G+ IHAHL+I+   T+ NI+Q NSLI+LY KC+Q+ +AR LFD M
Sbjct: 260 IQLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGM 319

Query: 66  PERNVVSWSSLMAGYFHSG 10
            +RNVVSW +LMAGYFH+G
Sbjct: 320 RKRNVVSWGALMAGYFHNG 338


>ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/79 (65%), Positives = 65/79 (82%)
 Frame = -1

Query: 246 IKLLKFSADTKNLKLGQTIHAHLLISTPNTQLNIIQTNSLIHLYVKCNQLSLARKLFDEM 67
           I+LLK SADTKNLK G+ IHAHL+I+   T+ NI+Q NSLI+LY KC+Q+ +AR LFD M
Sbjct: 29  IQLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGM 88

Query: 66  PERNVVSWSSLMAGYFHSG 10
            +RNVVSW +LMAGYFH+G
Sbjct: 89  RKRNVVSWGALMAGYFHNG 107


>ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Cucumis sativus]
          Length = 697

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/87 (62%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
 Frame = -1

Query: 258 HTLVIKLLKFSADTKNLKLGQTIHAHLLISTPNTQ-LNIIQTNSLIHLYVKCNQLSLARK 82
           H   IKLLK +AD KNLK G+TIHAHL I+  N +   + Q NSLI+LYVKC+++S+ARK
Sbjct: 19  HQDPIKLLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARK 78

Query: 81  LFDEMPERNVVSWSSLMAGYFHSGGSL 1
           LFD MP RNVVSWS+LMAGY  +G  L
Sbjct: 79  LFDSMPRRNVVSWSALMAGYMQNGNPL 105



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/84 (33%), Positives = 49/84 (58%)
 Frame = -1

Query: 264 YNHTLVIKLLKFSADTKNLKLGQTIHAHLLISTPNTQLNIIQTNSLIHLYVKCNQLSLAR 85
           +N+   + + +  A  K++ LG+ +HA +L S  +  + I   +S+I +Y KC  +   R
Sbjct: 222 WNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYI--GSSIIDMYGKCGNVLSGR 279

Query: 84  KLFDEMPERNVVSWSSLMAGYFHS 13
             FD +  RNVVSW+S++A YF +
Sbjct: 280 TFFDRLQSRNVVSWTSIIAAYFQN 303


>ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 703

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 46/81 (56%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
 Frame = -1

Query: 249 VIKLLKFSADTKNLKLGQTIHAHLLISTPNTQ-LNIIQTNSLIHLYVKCNQLSLARKLFD 73
           V+ LLKFSA  K+L+ G+TIHA L++    ++  +I Q NSLI+LY KC Q   ARKLFD
Sbjct: 26  VVNLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFD 85

Query: 72  EMPERNVVSWSSLMAGYFHSG 10
            M +RNVVSWS+LM GY H G
Sbjct: 86  RMLQRNVVSWSALMMGYLHKG 106



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/79 (34%), Positives = 48/79 (60%)
 Frame = -1

Query: 246 IKLLKFSADTKNLKLGQTIHAHLLISTPNTQLNIIQTNSLIHLYVKCNQLSLARKLFDEM 67
           + +L   A  ++L+LG  IHA LL +      ++  +++LI  Y KC ++  ARK FD +
Sbjct: 233 VSVLGLCAQIRDLQLGLQIHAQLLKT--GLVFDVFVSSTLIDTYGKCGEVLNARKQFDGL 290

Query: 66  PERNVVSWSSLMAGYFHSG 10
            +RNVV+W++++  Y  +G
Sbjct: 291 RDRNVVAWTAVLTAYLQNG 309