BLASTX nr result

ID: Coptis24_contig00022217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022217
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311673.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera]    72   6e-11
ref|XP_004167338.1| PREDICTED: putative E3 ubiquitin-protein lig...    70   1e-10
ref|XP_004134060.1| PREDICTED: putative E3 ubiquitin-protein lig...    70   1e-10
ref|XP_002332748.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10

>ref|XP_002311673.1| predicted protein [Populus trichocarpa] gi|222851493|gb|EEE89040.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 31/35 (88%), Positives = 31/35 (88%)
 Frame = -2

Query: 348 HMAGCMSCLNEIKGKKWGCPVCRASIQQVVRLYAV 244
           HMAGCMSCL EIK KKWGCPVCRA I QVVRLYAV
Sbjct: 408 HMAGCMSCLKEIKAKKWGCPVCRAKIDQVVRLYAV 442


>emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera]
          Length = 500

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 30/35 (85%), Positives = 32/35 (91%)
 Frame = -2

Query: 348 HMAGCMSCLNEIKGKKWGCPVCRASIQQVVRLYAV 244
           HMAGCMSCLNEIK KKWGCPVCRA I QVV+LY+V
Sbjct: 466 HMAGCMSCLNEIKAKKWGCPVCRAKIDQVVKLYSV 500


>ref|XP_004167338.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT35-like
           [Cucumis sativus]
          Length = 459

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 30/35 (85%), Positives = 31/35 (88%)
 Frame = -2

Query: 348 HMAGCMSCLNEIKGKKWGCPVCRASIQQVVRLYAV 244
           HMAGCM+CL EIK KKWGCPVCRA I QVVRLYAV
Sbjct: 425 HMAGCMNCLTEIKSKKWGCPVCRAKIDQVVRLYAV 459


>ref|XP_004134060.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT35-like
           [Cucumis sativus]
          Length = 459

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 30/35 (85%), Positives = 31/35 (88%)
 Frame = -2

Query: 348 HMAGCMSCLNEIKGKKWGCPVCRASIQQVVRLYAV 244
           HMAGCM+CL EIK KKWGCPVCRA I QVVRLYAV
Sbjct: 425 HMAGCMNCLTEIKSKKWGCPVCRAKIDQVVRLYAV 459


>ref|XP_002332748.1| predicted protein [Populus trichocarpa] gi|222833076|gb|EEE71553.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 30/35 (85%), Positives = 31/35 (88%)
 Frame = -2

Query: 348 HMAGCMSCLNEIKGKKWGCPVCRASIQQVVRLYAV 244
           HM GCMSCL EIK KKWGCPVCRA+I QVVRLYAV
Sbjct: 410 HMVGCMSCLKEIKAKKWGCPVCRATINQVVRLYAV 444


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