BLASTX nr result
ID: Coptis24_contig00022217
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00022217 (349 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002311673.1| predicted protein [Populus trichocarpa] gi|2... 72 6e-11 emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera] 72 6e-11 ref|XP_004167338.1| PREDICTED: putative E3 ubiquitin-protein lig... 70 1e-10 ref|XP_004134060.1| PREDICTED: putative E3 ubiquitin-protein lig... 70 1e-10 ref|XP_002332748.1| predicted protein [Populus trichocarpa] gi|2... 70 1e-10 >ref|XP_002311673.1| predicted protein [Populus trichocarpa] gi|222851493|gb|EEE89040.1| predicted protein [Populus trichocarpa] Length = 442 Score = 71.6 bits (174), Expect = 6e-11 Identities = 31/35 (88%), Positives = 31/35 (88%) Frame = -2 Query: 348 HMAGCMSCLNEIKGKKWGCPVCRASIQQVVRLYAV 244 HMAGCMSCL EIK KKWGCPVCRA I QVVRLYAV Sbjct: 408 HMAGCMSCLKEIKAKKWGCPVCRAKIDQVVRLYAV 442 >emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera] Length = 500 Score = 71.6 bits (174), Expect = 6e-11 Identities = 30/35 (85%), Positives = 32/35 (91%) Frame = -2 Query: 348 HMAGCMSCLNEIKGKKWGCPVCRASIQQVVRLYAV 244 HMAGCMSCLNEIK KKWGCPVCRA I QVV+LY+V Sbjct: 466 HMAGCMSCLNEIKAKKWGCPVCRAKIDQVVKLYSV 500 >ref|XP_004167338.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT35-like [Cucumis sativus] Length = 459 Score = 70.5 bits (171), Expect = 1e-10 Identities = 30/35 (85%), Positives = 31/35 (88%) Frame = -2 Query: 348 HMAGCMSCLNEIKGKKWGCPVCRASIQQVVRLYAV 244 HMAGCM+CL EIK KKWGCPVCRA I QVVRLYAV Sbjct: 425 HMAGCMNCLTEIKSKKWGCPVCRAKIDQVVRLYAV 459 >ref|XP_004134060.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT35-like [Cucumis sativus] Length = 459 Score = 70.5 bits (171), Expect = 1e-10 Identities = 30/35 (85%), Positives = 31/35 (88%) Frame = -2 Query: 348 HMAGCMSCLNEIKGKKWGCPVCRASIQQVVRLYAV 244 HMAGCM+CL EIK KKWGCPVCRA I QVVRLYAV Sbjct: 425 HMAGCMNCLTEIKSKKWGCPVCRAKIDQVVRLYAV 459 >ref|XP_002332748.1| predicted protein [Populus trichocarpa] gi|222833076|gb|EEE71553.1| predicted protein [Populus trichocarpa] Length = 444 Score = 70.5 bits (171), Expect = 1e-10 Identities = 30/35 (85%), Positives = 31/35 (88%) Frame = -2 Query: 348 HMAGCMSCLNEIKGKKWGCPVCRASIQQVVRLYAV 244 HM GCMSCL EIK KKWGCPVCRA+I QVVRLYAV Sbjct: 410 HMVGCMSCLKEIKAKKWGCPVCRATINQVVRLYAV 444