BLASTX nr result

ID: Coptis24_contig00022209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022209
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264392.1| PREDICTED: protein CHUP1, chloroplastic [Vit...    67   2e-09
emb|CAN72920.1| hypothetical protein VITISV_022322 [Vitis vinifera]    67   2e-09
ref|XP_002307197.1| predicted protein [Populus trichocarpa] gi|2...    65   8e-09
ref|XP_003553573.1| PREDICTED: protein CHUP1, chloroplastic-like...    57   1e-06
gb|ACU21065.1| unknown [Glycine max]                                   57   2e-06

>ref|XP_002264392.1| PREDICTED: protein CHUP1, chloroplastic [Vitis vinifera]
           gi|297740023|emb|CBI30205.3| unnamed protein product
           [Vitis vinifera]
          Length = 440

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/51 (60%), Positives = 38/51 (74%)
 Frame = +3

Query: 114 QKESEDTGVYVHDQLITELEQLQKDRAAEAEELVYLRWINACFRHELTRNQ 266
           + E+E      ++QL+ ELE+L KDRAAE +ELVYLRW NAC RHEL RNQ
Sbjct: 267 KSEAEGIAKEDYNQLVNELERLHKDRAAEVKELVYLRWSNACLRHELMRNQ 317


>emb|CAN72920.1| hypothetical protein VITISV_022322 [Vitis vinifera]
          Length = 1303

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/51 (60%), Positives = 38/51 (74%)
 Frame = +3

Query: 114 QKESEDTGVYVHDQLITELEQLQKDRAAEAEELVYLRWINACFRHELTRNQ 266
           + E+E      ++QL+ ELE+L KDRAAE +ELVYLRW NAC RHEL RNQ
Sbjct: 267 KSEAEGIAKEDYNQLVNELERLHKDRAAEVKELVYLRWSNACLRHELMRNQ 317


>ref|XP_002307197.1| predicted protein [Populus trichocarpa] gi|222856646|gb|EEE94193.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 29/48 (60%), Positives = 37/48 (77%)
 Frame = +3

Query: 120 ESEDTGVYVHDQLITELEQLQKDRAAEAEELVYLRWINACFRHELTRN 263
           E+E  G+  +++L+ ELEQL KDRAAE  EL+YLRW NAC RHEL R+
Sbjct: 289 EAEGIGMEDYNRLVNELEQLHKDRAAETTELIYLRWSNACLRHELMRS 336


>ref|XP_003553573.1| PREDICTED: protein CHUP1, chloroplastic-like [Glycine max]
          Length = 445

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/50 (52%), Positives = 36/50 (72%)
 Frame = +3

Query: 114 QKESEDTGVYVHDQLITELEQLQKDRAAEAEELVYLRWINACFRHELTRN 263
           Q E+ D     + +L+ ELEQ +K+RA EA+EL+YLRW NAC RH+L R+
Sbjct: 294 QIEAGDVSREEYTKLLDELEQAKKERADEAKELIYLRWTNACLRHDLVRH 343


>gb|ACU21065.1| unknown [Glycine max]
          Length = 450

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/52 (48%), Positives = 39/52 (75%)
 Frame = +3

Query: 108 FLQKESEDTGVYVHDQLITELEQLQKDRAAEAEELVYLRWINACFRHELTRN 263
           +L+ ES D     + ++++ELE+++KDRA E EEL++LR +NAC R ELTR+
Sbjct: 296 YLEVESRDVSKEDYTKVLSELEEIKKDRATEIEELIHLRRVNACLREELTRH 347


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