BLASTX nr result

ID: Coptis24_contig00022149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022149
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31514.3| unnamed protein product [Vitis vinifera]              135   3e-30
ref|XP_002278274.1| PREDICTED: Golgi to ER traffic protein 4 hom...   135   3e-30
ref|XP_002523898.1| conserved hypothetical protein [Ricinus comm...   133   2e-29
gb|AFK33559.1| unknown [Medicago truncatula]                          128   6e-28
gb|ACJ85255.1| unknown [Medicago truncatula]                          128   6e-28

>emb|CBI31514.3| unnamed protein product [Vitis vinifera]
          Length = 684

 Score =  135 bits (340), Expect = 3e-30
 Identities = 66/89 (74%), Positives = 79/89 (88%)
 Frame = +3

Query: 3   LLYLSLMNLRDANCLLDELRKQVGSMQLELPRSDLIQFVIYLLQTLERDALPLFRMLRQN 182
           L+YLSL NLRDAN L+DE++KQV S +L+ P SDL +F+ YLL TL+RDALPLF MLRQ+
Sbjct: 582 LMYLSLGNLRDANYLMDEVKKQVESKELDYPESDLTEFIDYLLLTLQRDALPLFNMLRQS 641

Query: 183 YKSSIDREPAFNELLDEISEKFYGVQRKN 269
           YKSSIDREPAFNELLDEI+EKFYGV+R+N
Sbjct: 642 YKSSIDREPAFNELLDEIAEKFYGVRRRN 670


>ref|XP_002278274.1| PREDICTED: Golgi to ER traffic protein 4 homolog [Vitis vinifera]
          Length = 322

 Score =  135 bits (340), Expect = 3e-30
 Identities = 66/89 (74%), Positives = 79/89 (88%)
 Frame = +3

Query: 3   LLYLSLMNLRDANCLLDELRKQVGSMQLELPRSDLIQFVIYLLQTLERDALPLFRMLRQN 182
           L+YLSL NLRDAN L+DE++KQV S +L+ P SDL +F+ YLL TL+RDALPLF MLRQ+
Sbjct: 220 LMYLSLGNLRDANYLMDEVKKQVESKELDYPESDLTEFIDYLLLTLQRDALPLFNMLRQS 279

Query: 183 YKSSIDREPAFNELLDEISEKFYGVQRKN 269
           YKSSIDREPAFNELLDEI+EKFYGV+R+N
Sbjct: 280 YKSSIDREPAFNELLDEIAEKFYGVRRRN 308


>ref|XP_002523898.1| conserved hypothetical protein [Ricinus communis]
           gi|223536828|gb|EEF38467.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 324

 Score =  133 bits (334), Expect = 2e-29
 Identities = 64/89 (71%), Positives = 77/89 (86%)
 Frame = +3

Query: 3   LLYLSLMNLRDANCLLDELRKQVGSMQLELPRSDLIQFVIYLLQTLERDALPLFRMLRQN 182
           LLYL+L NLRDAN L+DE++KQV S +L+ P+SDLIQF+ YLL TL+RDA PLF MLR +
Sbjct: 223 LLYLALGNLRDANRLMDEVKKQVESKKLDFPKSDLIQFITYLLPTLQRDAFPLFNMLRAS 282

Query: 183 YKSSIDREPAFNELLDEISEKFYGVQRKN 269
           YKSSIDREP FNELLDEI+EK YG+QR+N
Sbjct: 283 YKSSIDREPVFNELLDEIAEKLYGIQRRN 311


>gb|AFK33559.1| unknown [Medicago truncatula]
          Length = 154

 Score =  128 bits (321), Expect = 6e-28
 Identities = 60/89 (67%), Positives = 77/89 (86%)
 Frame = +3

Query: 3   LLYLSLMNLRDANCLLDELRKQVGSMQLELPRSDLIQFVIYLLQTLERDALPLFRMLRQN 182
           L YLSL NL+DAN L+DE++KQ  S ++E P++DL+QF+ +LLQT+ERDA PLF MLR N
Sbjct: 56  LRYLSLGNLKDANILVDEIKKQTESTEVEFPKTDLMQFLNFLLQTMERDAFPLFNMLRAN 115

Query: 183 YKSSIDREPAFNELLDEISEKFYGVQRKN 269
           YK SI+REP+FNELLDEI++KFYGVQR+N
Sbjct: 116 YKPSIEREPSFNELLDEIAQKFYGVQRRN 144


>gb|ACJ85255.1| unknown [Medicago truncatula]
          Length = 221

 Score =  128 bits (321), Expect = 6e-28
 Identities = 60/89 (67%), Positives = 77/89 (86%)
 Frame = +3

Query: 3   LLYLSLMNLRDANCLLDELRKQVGSMQLELPRSDLIQFVIYLLQTLERDALPLFRMLRQN 182
           L YLSL NL+DAN L+DE++KQ  S ++E P++DL+QF+ +LLQT+ERDA PLF MLR N
Sbjct: 118 LRYLSLGNLKDANILVDEIKKQTESTEVEFPKTDLMQFLNFLLQTMERDAFPLFNMLRAN 177

Query: 183 YKSSIDREPAFNELLDEISEKFYGVQRKN 269
           YK SI+REP+FNELLDEI++KFYGVQR+N
Sbjct: 178 YKPSIEREPSFNELLDEIAQKFYGVQRRN 206


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