BLASTX nr result

ID: Coptis24_contig00022119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022119
         (925 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323855.1| predicted protein [Populus trichocarpa] gi|2...   129   1e-27
ref|XP_002306048.1| predicted protein [Populus trichocarpa] gi|2...   127   3e-27
ref|XP_002534013.1| transcription factor, putative [Ricinus comm...   122   2e-25
ref|XP_002283546.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   119   8e-25
ref|XP_002875479.1| hypothetical protein ARALYDRAFT_484661 [Arab...   117   4e-24

>ref|XP_002323855.1| predicted protein [Populus trichocarpa] gi|222866857|gb|EEF03988.1|
           predicted protein [Populus trichocarpa]
          Length = 96

 Score =  129 bits (323), Expect = 1e-27
 Identities = 56/66 (84%), Positives = 60/66 (90%)
 Frame = -3

Query: 656 YGECQKNHAAKIGGYAVDGCREFMASGEEGTSGALKCAACSCHRNFHRREVDYEVVCECS 477
           YGECQKNHAA +GGYAVDGCREFMASGEEGT+ AL CAAC CHRNFHRREV+ EV C+CS
Sbjct: 30  YGECQKNHAAGVGGYAVDGCREFMASGEEGTAAALTCAACGCHRNFHRREVETEVACDCS 89

Query: 476 SPSSNG 459
           SPSSNG
Sbjct: 90  SPSSNG 95


>ref|XP_002306048.1| predicted protein [Populus trichocarpa] gi|222849012|gb|EEE86559.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score =  127 bits (320), Expect = 3e-27
 Identities = 55/66 (83%), Positives = 60/66 (90%)
 Frame = -3

Query: 656 YGECQKNHAAKIGGYAVDGCREFMASGEEGTSGALKCAACSCHRNFHRREVDYEVVCECS 477
           YGEC KNHAA +GGYAVDGCREFMASGEEGT+ AL CAAC CHRNFHRREV+ EV+C+CS
Sbjct: 64  YGECLKNHAASVGGYAVDGCREFMASGEEGTADALTCAACGCHRNFHRREVETEVICDCS 123

Query: 476 SPSSNG 459
           SPSSNG
Sbjct: 124 SPSSNG 129


>ref|XP_002534013.1| transcription factor, putative [Ricinus communis]
           gi|223525986|gb|EEF28371.1| transcription factor,
           putative [Ricinus communis]
          Length = 98

 Score =  122 bits (305), Expect = 2e-25
 Identities = 57/68 (83%), Positives = 61/68 (89%), Gaps = 2/68 (2%)
 Frame = -3

Query: 656 YGECQKNHAAKIGGYAVDGCREFMAS-GEEGTSGALKCAACSCHRNFHRREVDYE-VVCE 483
           YGECQKNHAA +GGYAVDGCREFMAS GEEGT+ AL CAAC CHRNFHRREV+ E VVC+
Sbjct: 30  YGECQKNHAANVGGYAVDGCREFMASNGEEGTTAALTCAACGCHRNFHRREVETEQVVCD 89

Query: 482 CSSPSSNG 459
           CSSPSSNG
Sbjct: 90  CSSPSSNG 97


>ref|XP_002283546.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Vitis vinifera]
          Length = 95

 Score =  119 bits (299), Expect = 8e-25
 Identities = 53/67 (79%), Positives = 58/67 (86%)
 Frame = -3

Query: 656 YGECQKNHAAKIGGYAVDGCREFMASGEEGTSGALKCAACSCHRNFHRREVDYEVVCECS 477
           YGECQKNHAA IGG+AVDGCREFMASG+EGTS  L CAAC CHRNFHRREV+ EV+C CS
Sbjct: 29  YGECQKNHAAGIGGHAVDGCREFMASGQEGTSSELICAACGCHRNFHRREVETEVLCPCS 88

Query: 476 SPSSNGK 456
           S  SNG+
Sbjct: 89  SAPSNGR 95


>ref|XP_002875479.1| hypothetical protein ARALYDRAFT_484661 [Arabidopsis lyrata subsp.
           lyrata] gi|297321317|gb|EFH51738.1| hypothetical protein
           ARALYDRAFT_484661 [Arabidopsis lyrata subsp. lyrata]
          Length = 100

 Score =  117 bits (293), Expect = 4e-24
 Identities = 52/67 (77%), Positives = 58/67 (86%), Gaps = 1/67 (1%)
 Frame = -3

Query: 656 YGECQKNHAAKIGGYAVDGCREFMAS-GEEGTSGALKCAACSCHRNFHRREVDYEVVCEC 480
           YGECQKNHAA +GGYAVDGCREFMAS GEEGT  AL CAAC CHR+FHRRE++ EVVC+C
Sbjct: 33  YGECQKNHAAAVGGYAVDGCREFMASRGEEGTLAALTCAACGCHRSFHRREIETEVVCDC 92

Query: 479 SSPSSNG 459
           +SP S G
Sbjct: 93  NSPPSTG 99


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