BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022110
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago t...    66   3e-09
ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat...    54   1e-05

>ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355501015|gb|AES82218.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 607

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/52 (59%), Positives = 37/52 (71%)
 Frame = +3

Query: 3   GLHSNLEFGLFAAEAMYKLEKDHPAMYSLLSKIHGHNGVWTRVIELRKMMKQ 158
           GLHSNLE G +AAE + +LE  HP  YS+LSKI G  GVW+ V ELR  MK+
Sbjct: 448 GLHSNLELGEYAAERIRRLESSHPVSYSVLSKIQGEKGVWSSVNELRDTMKE 499


>ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
           gi|449493520|ref|XP_004159329.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 26/52 (50%), Positives = 36/52 (69%)
 Frame = +3

Query: 6   LHSNLEFGLFAAEAMYKLEKDHPAMYSLLSKIHGHNGVWTRVIELRKMMKQM 161
           L+ NLE G +AAE+++KLE  +PA Y LLS I+   G W  V +LRK M++M
Sbjct: 552 LNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREM 603