BLASTX nr result

ID: Coptis24_contig00022088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022088
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304721.1| predicted protein [Populus trichocarpa] gi|2...   113   3e-23
ref|XP_002297800.1| predicted protein [Populus trichocarpa] gi|2...   108   5e-22
ref|XP_002527314.1| zinc finger protein, putative [Ricinus commu...   108   7e-22
emb|CBI21086.3| unnamed protein product [Vitis vinifera]              105   6e-21
ref|XP_002282938.1| PREDICTED: zinc finger protein 3-like [Vitis...   105   6e-21

>ref|XP_002304721.1| predicted protein [Populus trichocarpa] gi|222842153|gb|EEE79700.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score =  113 bits (282), Expect = 3e-23
 Identities = 52/65 (80%), Positives = 59/65 (90%)
 Frame = -1

Query: 195 ELNLIDCFNLGPSQKSLDAVNAIESEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTIAK 16
           ELNLID F++ PS KSLDA  + E+EPRVFSCN+CQRKFYSSQALGGHQNAHKRERT+AK
Sbjct: 51  ELNLIDSFDMNPSSKSLDAPQSNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK 110

Query: 15  RGQRL 1
           RGQR+
Sbjct: 111 RGQRI 115


>ref|XP_002297800.1| predicted protein [Populus trichocarpa] gi|222845058|gb|EEE82605.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  108 bits (271), Expect = 5e-22
 Identities = 49/65 (75%), Positives = 58/65 (89%)
 Frame = -1

Query: 195 ELNLIDCFNLGPSQKSLDAVNAIESEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTIAK 16
           +LNLID F++ PS+KSLD     E+EPRVFSCN+CQRKFYSSQALGGHQNAHKRERT++K
Sbjct: 9   QLNLIDSFDMDPSRKSLDTPQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLSK 68

Query: 15  RGQRL 1
           RGQR+
Sbjct: 69  RGQRI 73


>ref|XP_002527314.1| zinc finger protein, putative [Ricinus communis]
           gi|223533314|gb|EEF35066.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 280

 Score =  108 bits (270), Expect = 7e-22
 Identities = 53/67 (79%), Positives = 59/67 (88%), Gaps = 2/67 (2%)
 Frame = -1

Query: 195 ELNLIDCFNLGPSQKSL--DAVNAIESEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTI 22
           ELNLID F+LGPSQKSL  +     E+EPRVFSCN+CQRKFYSSQALGGHQNAHKRERT+
Sbjct: 77  ELNLIDTFDLGPSQKSLSDNPHQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTL 136

Query: 21  AKRGQRL 1
           AKRGQR+
Sbjct: 137 AKRGQRI 143


>emb|CBI21086.3| unnamed protein product [Vitis vinifera]
          Length = 252

 Score =  105 bits (262), Expect = 6e-21
 Identities = 49/65 (75%), Positives = 54/65 (83%)
 Frame = -1

Query: 195 ELNLIDCFNLGPSQKSLDAVNAIESEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTIAK 16
           ELNLIDC N   SQ S +     ++EPRVFSCN+CQRKFYSSQALGGHQNAHKRERT+AK
Sbjct: 44  ELNLIDCLNTDSSQTSSEIPQPADAEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK 103

Query: 15  RGQRL 1
           RGQRL
Sbjct: 104 RGQRL 108


>ref|XP_002282938.1| PREDICTED: zinc finger protein 3-like [Vitis vinifera]
          Length = 286

 Score =  105 bits (262), Expect = 6e-21
 Identities = 49/65 (75%), Positives = 54/65 (83%)
 Frame = -1

Query: 195 ELNLIDCFNLGPSQKSLDAVNAIESEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTIAK 16
           ELNLIDC N   SQ S +     ++EPRVFSCN+CQRKFYSSQALGGHQNAHKRERT+AK
Sbjct: 78  ELNLIDCLNTDSSQTSSEIPQPADAEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK 137

Query: 15  RGQRL 1
           RGQRL
Sbjct: 138 RGQRL 142


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