BLASTX nr result
ID: Coptis24_contig00022088
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00022088 (594 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002304721.1| predicted protein [Populus trichocarpa] gi|2... 113 3e-23 ref|XP_002297800.1| predicted protein [Populus trichocarpa] gi|2... 108 5e-22 ref|XP_002527314.1| zinc finger protein, putative [Ricinus commu... 108 7e-22 emb|CBI21086.3| unnamed protein product [Vitis vinifera] 105 6e-21 ref|XP_002282938.1| PREDICTED: zinc finger protein 3-like [Vitis... 105 6e-21 >ref|XP_002304721.1| predicted protein [Populus trichocarpa] gi|222842153|gb|EEE79700.1| predicted protein [Populus trichocarpa] Length = 194 Score = 113 bits (282), Expect = 3e-23 Identities = 52/65 (80%), Positives = 59/65 (90%) Frame = -1 Query: 195 ELNLIDCFNLGPSQKSLDAVNAIESEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTIAK 16 ELNLID F++ PS KSLDA + E+EPRVFSCN+CQRKFYSSQALGGHQNAHKRERT+AK Sbjct: 51 ELNLIDSFDMNPSSKSLDAPQSNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK 110 Query: 15 RGQRL 1 RGQR+ Sbjct: 111 RGQRI 115 >ref|XP_002297800.1| predicted protein [Populus trichocarpa] gi|222845058|gb|EEE82605.1| predicted protein [Populus trichocarpa] Length = 168 Score = 108 bits (271), Expect = 5e-22 Identities = 49/65 (75%), Positives = 58/65 (89%) Frame = -1 Query: 195 ELNLIDCFNLGPSQKSLDAVNAIESEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTIAK 16 +LNLID F++ PS+KSLD E+EPRVFSCN+CQRKFYSSQALGGHQNAHKRERT++K Sbjct: 9 QLNLIDSFDMDPSRKSLDTPQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLSK 68 Query: 15 RGQRL 1 RGQR+ Sbjct: 69 RGQRI 73 >ref|XP_002527314.1| zinc finger protein, putative [Ricinus communis] gi|223533314|gb|EEF35066.1| zinc finger protein, putative [Ricinus communis] Length = 280 Score = 108 bits (270), Expect = 7e-22 Identities = 53/67 (79%), Positives = 59/67 (88%), Gaps = 2/67 (2%) Frame = -1 Query: 195 ELNLIDCFNLGPSQKSL--DAVNAIESEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTI 22 ELNLID F+LGPSQKSL + E+EPRVFSCN+CQRKFYSSQALGGHQNAHKRERT+ Sbjct: 77 ELNLIDTFDLGPSQKSLSDNPHQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTL 136 Query: 21 AKRGQRL 1 AKRGQR+ Sbjct: 137 AKRGQRI 143 >emb|CBI21086.3| unnamed protein product [Vitis vinifera] Length = 252 Score = 105 bits (262), Expect = 6e-21 Identities = 49/65 (75%), Positives = 54/65 (83%) Frame = -1 Query: 195 ELNLIDCFNLGPSQKSLDAVNAIESEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTIAK 16 ELNLIDC N SQ S + ++EPRVFSCN+CQRKFYSSQALGGHQNAHKRERT+AK Sbjct: 44 ELNLIDCLNTDSSQTSSEIPQPADAEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK 103 Query: 15 RGQRL 1 RGQRL Sbjct: 104 RGQRL 108 >ref|XP_002282938.1| PREDICTED: zinc finger protein 3-like [Vitis vinifera] Length = 286 Score = 105 bits (262), Expect = 6e-21 Identities = 49/65 (75%), Positives = 54/65 (83%) Frame = -1 Query: 195 ELNLIDCFNLGPSQKSLDAVNAIESEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTIAK 16 ELNLIDC N SQ S + ++EPRVFSCN+CQRKFYSSQALGGHQNAHKRERT+AK Sbjct: 78 ELNLIDCLNTDSSQTSSEIPQPADAEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK 137 Query: 15 RGQRL 1 RGQRL Sbjct: 138 RGQRL 142