BLASTX nr result

ID: Coptis24_contig00022062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022062
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM05612.1| pectate lyase, partial [Eucalyptus pyrocarpa]         115   3e-24
dbj|BAM05611.1| pectate lyase, partial [Eucalyptus pilularis]         115   4e-24
dbj|BAM05613.1| pectate lyase, partial [Eucalyptus globulus subs...   112   4e-23
ref|XP_002316399.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
gb|ABD47739.1| pectate lyase [Eucalyptus globulus subsp. globulus]    111   7e-23

>dbj|BAM05612.1| pectate lyase, partial [Eucalyptus pyrocarpa]
          Length = 334

 Score =  115 bits (289), Expect = 3e-24
 Identities = 51/72 (70%), Positives = 64/72 (88%)
 Frame = +1

Query: 1   EVTKRVETKDGEWSDWDWRSDGDEMVNGAFFVPSGSGVGMKYSKASSVEPKSAGLIDRLT 180
           +VTKRV+T++ EW+DW+WR++GD MVNGA+FVPSG G+  +YSKASS+EPKSAGLID+LT
Sbjct: 183 QVTKRVDTEENEWTDWNWRTEGDMMVNGAYFVPSGVGLSAQYSKASSLEPKSAGLIDQLT 242

Query: 181 MNAGVMGGSRDN 216
           MNAGV G  RDN
Sbjct: 243 MNAGVFGDPRDN 254


>dbj|BAM05611.1| pectate lyase, partial [Eucalyptus pilularis]
          Length = 333

 Score =  115 bits (288), Expect = 4e-24
 Identities = 51/72 (70%), Positives = 64/72 (88%)
 Frame = +1

Query: 1   EVTKRVETKDGEWSDWDWRSDGDEMVNGAFFVPSGSGVGMKYSKASSVEPKSAGLIDRLT 180
           +VTKRV+T++ +W+DW+WR++GD MVNGAFFVPSG G+  +YSKASS+EPKSAGLID+LT
Sbjct: 181 QVTKRVDTEENDWTDWNWRTEGDIMVNGAFFVPSGVGLSAQYSKASSLEPKSAGLIDQLT 240

Query: 181 MNAGVMGGSRDN 216
           MNAGV G  RDN
Sbjct: 241 MNAGVFGDPRDN 252


>dbj|BAM05613.1| pectate lyase, partial [Eucalyptus globulus subsp. globulus]
          Length = 324

 Score =  112 bits (279), Expect = 4e-23
 Identities = 49/71 (69%), Positives = 63/71 (88%)
 Frame = +1

Query: 1   EVTKRVETKDGEWSDWDWRSDGDEMVNGAFFVPSGSGVGMKYSKASSVEPKSAGLIDRLT 180
           +VTKRV+T++ +W+DW+WR++GD MVNGAFFVPSG G+  +YSKASS+EPKSAGLID+LT
Sbjct: 181 QVTKRVDTEENDWADWNWRTEGDIMVNGAFFVPSGVGLSAQYSKASSLEPKSAGLIDQLT 240

Query: 181 MNAGVMGGSRD 213
           +NAGV G  RD
Sbjct: 241 LNAGVFGDPRD 251


>ref|XP_002316399.1| predicted protein [Populus trichocarpa] gi|222865439|gb|EEF02570.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  111 bits (278), Expect = 5e-23
 Identities = 50/70 (71%), Positives = 61/70 (87%)
 Frame = +1

Query: 1   EVTKRVETKDGEWSDWDWRSDGDEMVNGAFFVPSGSGVGMKYSKASSVEPKSAGLIDRLT 180
           EVTKRV+T +G+W+ W+WR+DGD MVNGAFFVPSG+G+  +YSKASSVEPKSAGLI +LT
Sbjct: 346 EVTKRVDTNEGDWAGWNWRTDGDIMVNGAFFVPSGAGLSAQYSKASSVEPKSAGLIQQLT 405

Query: 181 MNAGVMGGSR 210
           +NAGV G  R
Sbjct: 406 LNAGVFGDPR 415


>gb|ABD47739.1| pectate lyase [Eucalyptus globulus subsp. globulus]
          Length = 338

 Score =  111 bits (277), Expect = 7e-23
 Identities = 49/71 (69%), Positives = 63/71 (88%)
 Frame = +1

Query: 1   EVTKRVETKDGEWSDWDWRSDGDEMVNGAFFVPSGSGVGMKYSKASSVEPKSAGLIDRLT 180
           +VTKRV+T++ EW+DW+WR++GD MVNGA+FVPSG G+  +YSKASS+EPKSAGLID+LT
Sbjct: 187 QVTKRVDTEETEWTDWNWRTEGDIMVNGAYFVPSGVGLSAQYSKASSLEPKSAGLIDQLT 246

Query: 181 MNAGVMGGSRD 213
           +NAGV G  RD
Sbjct: 247 LNAGVFGDPRD 257


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