BLASTX nr result

ID: Coptis24_contig00022021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022021
         (993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306254.1| white-brown-complex ABC transporter family [...   416   e-114
ref|XP_002274622.1| PREDICTED: ABC transporter G family member 5...   414   e-113
ref|XP_002516304.1| ATP-binding cassette transporter, putative [...   405   e-110
emb|CAO94661.1| ATP Binding Cassette Transporter (CrWBC1) [Catha...   402   e-110
ref|XP_003525127.1| PREDICTED: ABC transporter G family member 5...   395   e-108

>ref|XP_002306254.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222855703|gb|EEE93250.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 643

 Score =  416 bits (1068), Expect = e-114
 Identities = 214/291 (73%), Positives = 247/291 (84%), Gaps = 2/291 (0%)
 Frame = -2

Query: 923 MKKQGCEIQAVGINYHIYIXXXXXXXXXXXKQVKDHQEQETQREVREPII--RPVLKDVR 750
           MKKQGCEI+A+GI+Y I             K+ + ++E +   ++ E  +  + VLKDV 
Sbjct: 1   MKKQGCEIEAIGISYKISTKKREHPFKIFTKKQEINEEPKQVTDLEEASLGAKHVLKDVF 60

Query: 749 CIAKPWEILAIVGPSGAGKSSLLEILAGRLTPQKASIYINGKPMEKANFKKISGYVTQKD 570
           C AKPWEILAIVGPSGAGKSSLLEILAG+LTPQ  +I++N  P++KA FKKISGYVTQKD
Sbjct: 61  CKAKPWEILAIVGPSGAGKSSLLEILAGKLTPQNGTIFVNQNPIDKARFKKISGYVTQKD 120

Query: 569 TLFPFLTVEETLMFSAKLRLRLPSAQLSSNVESLIQELGLSHVAGSRVGDDRVRGISGGE 390
           TLFP LTVEETLMFSAKLRLRLP AQLSSNV+SL++ELGL HVA +RVGDDR+RGISGGE
Sbjct: 121 TLFPLLTVEETLMFSAKLRLRLPQAQLSSNVKSLMKELGLDHVAMTRVGDDRIRGISGGE 180

Query: 389 RRRVSIGVDVIHDPRVLILDEPTSGLDSTSALQIIDMLKTMAETRGRTIILSIHQPGFRI 210
           RRRVSIGVD IHDP VLILDEPTSGLDSTSALQIIDMLK MAETRGRTIILSIHQPGFRI
Sbjct: 181 RRRVSIGVDAIHDPEVLILDEPTSGLDSTSALQIIDMLKVMAETRGRTIILSIHQPGFRI 240

Query: 209 VKMFNSILLLANGSVLHHGTTDQLQVQLRSSGLELPLHVNVIEFAIEAIET 57
           VK+FNSIL++ANGSVLHHGT DQL V LR+ G++LP+HVNV+EFA+E+IET
Sbjct: 241 VKLFNSILMMANGSVLHHGTVDQLGVNLRTMGMQLPIHVNVVEFALESIET 291


>ref|XP_002274622.1| PREDICTED: ABC transporter G family member 5 isoform 1 [Vitis
           vinifera]
          Length = 635

 Score =  414 bits (1064), Expect = e-113
 Identities = 216/288 (75%), Positives = 238/288 (82%)
 Frame = -2

Query: 923 MKKQGCEIQAVGINYHIYIXXXXXXXXXXXKQVKDHQEQETQREVREPIIRPVLKDVRCI 744
           MKKQGCEI+A+GINY IY               K   +Q  +     P +R VLKDV C 
Sbjct: 1   MKKQGCEIEAIGINYQIYTHKGEQSSPF-----KIFNKQVVKGGTLSPGVRHVLKDVNCE 55

Query: 743 AKPWEILAIVGPSGAGKSSLLEILAGRLTPQKASIYINGKPMEKANFKKISGYVTQKDTL 564
           AKPWEILAIVGPSGAGKSSLLEILAG++ PQ ASI +N KPM+KA FKKISG+V QKDTL
Sbjct: 56  AKPWEILAIVGPSGAGKSSLLEILAGKIAPQTASICVNQKPMDKAQFKKISGFVAQKDTL 115

Query: 563 FPFLTVEETLMFSAKLRLRLPSAQLSSNVESLIQELGLSHVAGSRVGDDRVRGISGGERR 384
           FP LTVEETLMFSAKLRLRLP AQL S V+SLIQELGL HVAG RVGDD+ RGISGGERR
Sbjct: 116 FPLLTVEETLMFSAKLRLRLPPAQLISKVKSLIQELGLEHVAGVRVGDDKARGISGGERR 175

Query: 383 RVSIGVDVIHDPRVLILDEPTSGLDSTSALQIIDMLKTMAETRGRTIILSIHQPGFRIVK 204
           RVSIGVD +HDP+VLILDEPTSGLDSTSALQIIDMLKTMAE+RGRTIILSIHQPGFRIVK
Sbjct: 176 RVSIGVDAVHDPKVLILDEPTSGLDSTSALQIIDMLKTMAESRGRTIILSIHQPGFRIVK 235

Query: 203 MFNSILLLANGSVLHHGTTDQLQVQLRSSGLELPLHVNVIEFAIEAIE 60
           +FNSILLLANGSVLHHGT +QL + LR  GLE PLHVN++E+AIE+IE
Sbjct: 236 LFNSILLLANGSVLHHGTVEQLGLNLRLMGLEPPLHVNIVEYAIESIE 283


>ref|XP_002516304.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223544534|gb|EEF46051.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 600

 Score =  405 bits (1040), Expect = e-110
 Identities = 212/288 (73%), Positives = 233/288 (80%)
 Frame = -2

Query: 923 MKKQGCEIQAVGINYHIYIXXXXXXXXXXXKQVKDHQEQETQREVREPIIRPVLKDVRCI 744
           M+KQGCEI+A GINY I              +          +E + P I+ VLK+V C 
Sbjct: 1   MRKQGCEIEARGINYKISTKETELNLLKIFNK---------DQEPKSPGIKHVLKEVNCK 51

Query: 743 AKPWEILAIVGPSGAGKSSLLEILAGRLTPQKASIYINGKPMEKANFKKISGYVTQKDTL 564
           AKPWEILAIVGPSGAGKSSLLE+LAGR  PQ  SI++N  PM+KA F KISGYVTQ+DTL
Sbjct: 52  AKPWEILAIVGPSGAGKSSLLEVLAGRFAPQNGSIFVNQSPMDKAQFNKISGYVTQRDTL 111

Query: 563 FPFLTVEETLMFSAKLRLRLPSAQLSSNVESLIQELGLSHVAGSRVGDDRVRGISGGERR 384
           FP LTVEETLMFSAKLRLRLP +QL S V+SL+ ELGL HVA +RVGDDRVRGISGGERR
Sbjct: 112 FPLLTVEETLMFSAKLRLRLPHSQLRSRVKSLVHELGLDHVATTRVGDDRVRGISGGERR 171

Query: 383 RVSIGVDVIHDPRVLILDEPTSGLDSTSALQIIDMLKTMAETRGRTIILSIHQPGFRIVK 204
           RVSIGVDVIHDP VLILDEPTSGLDSTSALQIIDMLK MAETRGRTIILSIHQPGFRIVK
Sbjct: 172 RVSIGVDVIHDPEVLILDEPTSGLDSTSALQIIDMLKVMAETRGRTIILSIHQPGFRIVK 231

Query: 203 MFNSILLLANGSVLHHGTTDQLQVQLRSSGLELPLHVNVIEFAIEAIE 60
           + NSILL+ANGSVLHHGT DQL V LR+ GLELPLH NV+EFAIE+IE
Sbjct: 232 LLNSILLMANGSVLHHGTVDQLGVNLRNIGLELPLHFNVVEFAIESIE 279


>emb|CAO94661.1| ATP Binding Cassette Transporter (CrWBC1) [Catharanthus roseus]
          Length = 626

 Score =  402 bits (1033), Expect = e-110
 Identities = 215/302 (71%), Positives = 243/302 (80%), Gaps = 13/302 (4%)
 Frame = -2

Query: 923 MKKQGCEIQAVGINYHIYIXXXXXXXXXXXKQVKDHQEQETQR-----EVREP------- 780
           MKKQGCEI+A+GINY I             K  +   +QE Q      +V+ P       
Sbjct: 1   MKKQGCEIEAMGINYSINNQKRESPFKIFTKNPEIVHQQEVQELEQVPKVKNPKSSSTSS 60

Query: 779 IIRPVLKDVRCIAKPWEILAIVGPSGAGKSSLLEILAGRLTPQKASIYINGKPMEKANFK 600
            +R VLK + C AKPWEILAIVGPSGAGKSSLLEILAG+LTPQ ASI++N KP EK  FK
Sbjct: 61  AVRHVLKGINCRAKPWEILAIVGPSGAGKSSLLEILAGKLTPQSASIFVNQKPFEKTKFK 120

Query: 599 KISGYVTQKDTLFPFLTVEETLMFSAKLRLRLPSAQLSSNVESLIQELGLSHVAGSRVGD 420
           KISGYVTQKDTLFP LTVEETLMFSAK RLRLP +QL   V+SL++ELGLSHVA +RVGD
Sbjct: 121 KISGYVTQKDTLFPLLTVEETLMFSAKFRLRLPESQLKIRVKSLMEELGLSHVANARVGD 180

Query: 419 D-RVRGISGGERRRVSIGVDVIHDPRVLILDEPTSGLDSTSALQIIDMLKTMAETRGRTI 243
           + RVRGISGGERRRVSIGV+VIHDP ++ILDEPTSGLDSTSALQIIDMLK MAE RGRTI
Sbjct: 181 EERVRGISGGERRRVSIGVEVIHDPEIVILDEPTSGLDSTSALQIIDMLKKMAEIRGRTI 240

Query: 242 ILSIHQPGFRIVKMFNSILLLANGSVLHHGTTDQLQVQLRSSGLELPLHVNVIEFAIEAI 63
           ILSIHQPGFRIVK+FNSILLLANGSVLHHGT D+L ++LR  GL+LPLHVNV+EFAI++I
Sbjct: 241 ILSIHQPGFRIVKLFNSILLLANGSVLHHGTVDKLSLRLRLMGLQLPLHVNVVEFAIDSI 300

Query: 62  ET 57
           ET
Sbjct: 301 ET 302


>ref|XP_003525127.1| PREDICTED: ABC transporter G family member 5-like [Glycine max]
          Length = 649

 Score =  395 bits (1016), Expect = e-108
 Identities = 207/294 (70%), Positives = 240/294 (81%), Gaps = 8/294 (2%)
 Frame = -2

Query: 914 QGCEIQAVGINYHIYIXXXXXXXXXXXKQV------KDHQEQETQREVREPI--IRPVLK 759
           QGCE+ A+GINY I+             +       +D +E E + EV +    +R VLK
Sbjct: 3   QGCEVDAIGINYTIHTHKSEHPFKIFSNKSAHLDTEQDGKEPEEEAEVEQSCSGVRHVLK 62

Query: 758 DVRCIAKPWEILAIVGPSGAGKSSLLEILAGRLTPQKASIYINGKPMEKANFKKISGYVT 579
           +V   AKPWEILAIVGPSGAGKSSLLEILAG+ +PQ  ++++N KP++KA F+K+SGYVT
Sbjct: 63  NVSFQAKPWEILAIVGPSGAGKSSLLEILAGKHSPQSGTVFLNHKPVDKAQFRKLSGYVT 122

Query: 578 QKDTLFPFLTVEETLMFSAKLRLRLPSAQLSSNVESLIQELGLSHVAGSRVGDDRVRGIS 399
           QKDTLFP LTVEETLMFSAKLRL+L   QL S V+SLIQELGL +VAG+R+GDDRVRGIS
Sbjct: 123 QKDTLFPLLTVEETLMFSAKLRLKLSQEQLCSRVKSLIQELGLDNVAGTRIGDDRVRGIS 182

Query: 398 GGERRRVSIGVDVIHDPRVLILDEPTSGLDSTSALQIIDMLKTMAETRGRTIILSIHQPG 219
           GGERRRVSIGV+VIHDP+VLILDEPTSGLDSTSALQIIDMLK MA+TRGRTIILSIHQPG
Sbjct: 183 GGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALQIIDMLKVMADTRGRTIILSIHQPG 242

Query: 218 FRIVKMFNSILLLANGSVLHHGTTDQLQVQLRSSGLELPLHVNVIEFAIEAIET 57
           FRIVK+FNS+LLLANGSVLHHGT D L V LR  GLELPLHVNV+EFAIE+I+T
Sbjct: 243 FRIVKLFNSLLLLANGSVLHHGTADLLSVNLRLMGLELPLHVNVVEFAIESIDT 296


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