BLASTX nr result

ID: Coptis24_contig00022000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022000
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284593.2| PREDICTED: kinesin-like protein KIF2A-like [...   108   1e-21
dbj|BAB40710.1| BY-2 kinesin-like protein 10 [Nicotiana tabacum]      102   6e-20
ref|XP_002516057.1| kif4, putative [Ricinus communis] gi|2235449...    96   4e-18
ref|XP_002303287.1| predicted protein [Populus trichocarpa] gi|2...    96   7e-18
ref|XP_002298217.1| predicted protein [Populus trichocarpa] gi|2...    93   4e-17

>ref|XP_002284593.2| PREDICTED: kinesin-like protein KIF2A-like [Vitis vinifera]
           gi|297743274|emb|CBI36141.3| unnamed protein product
           [Vitis vinifera]
          Length = 717

 Score =  108 bits (269), Expect = 1e-21
 Identities = 60/115 (52%), Positives = 75/115 (65%), Gaps = 18/115 (15%)
 Frame = -1

Query: 291 NPTLPSLQDXXXXXXXGIAG---------SKMYRNMQRN-NVGNDFFMEPITP------- 163
           N ++PSLQD       G  G         S++YR+MQR    GN+F+ EP TP       
Sbjct: 47  NASVPSLQDYGYYGGGGGGGGGGGGGGQGSRVYRSMQREFGGGNEFYSEPSTPPLNSRSM 106

Query: 162 -QRRNGDELVSPTQLSPGILDLHSLDTELIPDMPVPGLYDGTSHYHSMRGRSFDD 1
            QR+ G+E VSP++ SPG+LDLHSLDTEL+P+MPV  LYD TS YHS+RGRSFDD
Sbjct: 107 GQRKTGEEQVSPSEFSPGLLDLHSLDTELLPEMPVHSLYDSTSMYHSVRGRSFDD 161


>dbj|BAB40710.1| BY-2 kinesin-like protein 10 [Nicotiana tabacum]
          Length = 703

 Score =  102 bits (254), Expect = 6e-20
 Identities = 55/106 (51%), Positives = 68/106 (64%), Gaps = 9/106 (8%)
 Frame = -1

Query: 291 NPTLPSLQDXXXXXXXGIAGSKMYRNMQRN-NVGNDFFMEPITP--------QRRNGDEL 139
           N ++P  QD          GS+MYR  QR  + G+D F EP+TP        QRRNGDE 
Sbjct: 46  NTSIPPPQDYGYYGGAQ--GSRMYRGAQRTYSGGSDLFAEPLTPPGNPRQSSQRRNGDEE 103

Query: 138 VSPTQLSPGILDLHSLDTELIPDMPVPGLYDGTSHYHSMRGRSFDD 1
           +SP + SPG+LDLHSLDTEL+P+MPV GLYD  S +H  R +SFDD
Sbjct: 104 ISPNEFSPGLLDLHSLDTELLPEMPVAGLYDAPSMHHFGRAKSFDD 149


>ref|XP_002516057.1| kif4, putative [Ricinus communis] gi|223544962|gb|EEF46477.1| kif4,
           putative [Ricinus communis]
          Length = 712

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 48/87 (55%), Positives = 62/87 (71%), Gaps = 9/87 (10%)
 Frame = -1

Query: 234 GSKMYRNMQRN-NVGNDFFMEPITP--------QRRNGDELVSPTQLSPGILDLHSLDTE 82
           G +MYRN QR+ N  N+ + EP TP        QR+NG++  SP + SPG+LDLHS DTE
Sbjct: 71  GMRMYRNAQRSFNGANELYGEPTTPPVSSRPSSQRKNGED--SPNEFSPGLLDLHSFDTE 128

Query: 81  LIPDMPVPGLYDGTSHYHSMRGRSFDD 1
           L+P+MPVP LYD +S +H +RGRSFDD
Sbjct: 129 LLPEMPVPSLYDSSSLFHPVRGRSFDD 155


>ref|XP_002303287.1| predicted protein [Populus trichocarpa] gi|222840719|gb|EEE78266.1|
           predicted protein [Populus trichocarpa]
          Length = 689

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 54/109 (49%), Positives = 70/109 (64%), Gaps = 14/109 (12%)
 Frame = -1

Query: 285 TLPSLQDXXXXXXXGIAGS-----KMYRNMQRN-NVGNDFFMEPITP--------QRRNG 148
           +LP LQD       G  G      +MYRN Q + N GN+F+ EP TP        QR+NG
Sbjct: 26  SLPPLQDYNFYGGGGGGGVGGQALRMYRNAQSSFNRGNEFYSEPTTPPVSSRPSSQRKNG 85

Query: 147 DELVSPTQLSPGILDLHSLDTELIPDMPVPGLYDGTSHYHSMRGRSFDD 1
           ++  S  + SPG+LDLHS DTEL+P++ VPGLYDG+S +H +RGRSFDD
Sbjct: 86  ED--SSNEFSPGLLDLHSFDTELLPELQVPGLYDGSSLFHPVRGRSFDD 132


>ref|XP_002298217.1| predicted protein [Populus trichocarpa] gi|222845475|gb|EEE83022.1|
           predicted protein [Populus trichocarpa]
          Length = 721

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 46/85 (54%), Positives = 62/85 (72%), Gaps = 9/85 (10%)
 Frame = -1

Query: 228 KMYRNMQRN-NVGNDFFMEPITP--------QRRNGDELVSPTQLSPGILDLHSLDTELI 76
           +MY N Q + + GN+F+ EP TP        QR+NG++  SP + SPG+LDLHS DTEL+
Sbjct: 50  RMYGNAQSSFSRGNEFYSEPTTPPVSSRASSQRKNGED--SPNEFSPGLLDLHSFDTELL 107

Query: 75  PDMPVPGLYDGTSHYHSMRGRSFDD 1
           P++ VPGLYDG+S +H +RGRSFDD
Sbjct: 108 PELQVPGLYDGSSLFHPVRGRSFDD 132


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