BLASTX nr result
ID: Coptis24_contig00022000
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00022000 (636 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284593.2| PREDICTED: kinesin-like protein KIF2A-like [... 108 1e-21 dbj|BAB40710.1| BY-2 kinesin-like protein 10 [Nicotiana tabacum] 102 6e-20 ref|XP_002516057.1| kif4, putative [Ricinus communis] gi|2235449... 96 4e-18 ref|XP_002303287.1| predicted protein [Populus trichocarpa] gi|2... 96 7e-18 ref|XP_002298217.1| predicted protein [Populus trichocarpa] gi|2... 93 4e-17 >ref|XP_002284593.2| PREDICTED: kinesin-like protein KIF2A-like [Vitis vinifera] gi|297743274|emb|CBI36141.3| unnamed protein product [Vitis vinifera] Length = 717 Score = 108 bits (269), Expect = 1e-21 Identities = 60/115 (52%), Positives = 75/115 (65%), Gaps = 18/115 (15%) Frame = -1 Query: 291 NPTLPSLQDXXXXXXXGIAG---------SKMYRNMQRN-NVGNDFFMEPITP------- 163 N ++PSLQD G G S++YR+MQR GN+F+ EP TP Sbjct: 47 NASVPSLQDYGYYGGGGGGGGGGGGGGQGSRVYRSMQREFGGGNEFYSEPSTPPLNSRSM 106 Query: 162 -QRRNGDELVSPTQLSPGILDLHSLDTELIPDMPVPGLYDGTSHYHSMRGRSFDD 1 QR+ G+E VSP++ SPG+LDLHSLDTEL+P+MPV LYD TS YHS+RGRSFDD Sbjct: 107 GQRKTGEEQVSPSEFSPGLLDLHSLDTELLPEMPVHSLYDSTSMYHSVRGRSFDD 161 >dbj|BAB40710.1| BY-2 kinesin-like protein 10 [Nicotiana tabacum] Length = 703 Score = 102 bits (254), Expect = 6e-20 Identities = 55/106 (51%), Positives = 68/106 (64%), Gaps = 9/106 (8%) Frame = -1 Query: 291 NPTLPSLQDXXXXXXXGIAGSKMYRNMQRN-NVGNDFFMEPITP--------QRRNGDEL 139 N ++P QD GS+MYR QR + G+D F EP+TP QRRNGDE Sbjct: 46 NTSIPPPQDYGYYGGAQ--GSRMYRGAQRTYSGGSDLFAEPLTPPGNPRQSSQRRNGDEE 103 Query: 138 VSPTQLSPGILDLHSLDTELIPDMPVPGLYDGTSHYHSMRGRSFDD 1 +SP + SPG+LDLHSLDTEL+P+MPV GLYD S +H R +SFDD Sbjct: 104 ISPNEFSPGLLDLHSLDTELLPEMPVAGLYDAPSMHHFGRAKSFDD 149 >ref|XP_002516057.1| kif4, putative [Ricinus communis] gi|223544962|gb|EEF46477.1| kif4, putative [Ricinus communis] Length = 712 Score = 96.3 bits (238), Expect = 4e-18 Identities = 48/87 (55%), Positives = 62/87 (71%), Gaps = 9/87 (10%) Frame = -1 Query: 234 GSKMYRNMQRN-NVGNDFFMEPITP--------QRRNGDELVSPTQLSPGILDLHSLDTE 82 G +MYRN QR+ N N+ + EP TP QR+NG++ SP + SPG+LDLHS DTE Sbjct: 71 GMRMYRNAQRSFNGANELYGEPTTPPVSSRPSSQRKNGED--SPNEFSPGLLDLHSFDTE 128 Query: 81 LIPDMPVPGLYDGTSHYHSMRGRSFDD 1 L+P+MPVP LYD +S +H +RGRSFDD Sbjct: 129 LLPEMPVPSLYDSSSLFHPVRGRSFDD 155 >ref|XP_002303287.1| predicted protein [Populus trichocarpa] gi|222840719|gb|EEE78266.1| predicted protein [Populus trichocarpa] Length = 689 Score = 95.5 bits (236), Expect = 7e-18 Identities = 54/109 (49%), Positives = 70/109 (64%), Gaps = 14/109 (12%) Frame = -1 Query: 285 TLPSLQDXXXXXXXGIAGS-----KMYRNMQRN-NVGNDFFMEPITP--------QRRNG 148 +LP LQD G G +MYRN Q + N GN+F+ EP TP QR+NG Sbjct: 26 SLPPLQDYNFYGGGGGGGVGGQALRMYRNAQSSFNRGNEFYSEPTTPPVSSRPSSQRKNG 85 Query: 147 DELVSPTQLSPGILDLHSLDTELIPDMPVPGLYDGTSHYHSMRGRSFDD 1 ++ S + SPG+LDLHS DTEL+P++ VPGLYDG+S +H +RGRSFDD Sbjct: 86 ED--SSNEFSPGLLDLHSFDTELLPELQVPGLYDGSSLFHPVRGRSFDD 132 >ref|XP_002298217.1| predicted protein [Populus trichocarpa] gi|222845475|gb|EEE83022.1| predicted protein [Populus trichocarpa] Length = 721 Score = 93.2 bits (230), Expect = 4e-17 Identities = 46/85 (54%), Positives = 62/85 (72%), Gaps = 9/85 (10%) Frame = -1 Query: 228 KMYRNMQRN-NVGNDFFMEPITP--------QRRNGDELVSPTQLSPGILDLHSLDTELI 76 +MY N Q + + GN+F+ EP TP QR+NG++ SP + SPG+LDLHS DTEL+ Sbjct: 50 RMYGNAQSSFSRGNEFYSEPTTPPVSSRASSQRKNGED--SPNEFSPGLLDLHSFDTELL 107 Query: 75 PDMPVPGLYDGTSHYHSMRGRSFDD 1 P++ VPGLYDG+S +H +RGRSFDD Sbjct: 108 PELQVPGLYDGSSLFHPVRGRSFDD 132