BLASTX nr result

ID: Coptis24_contig00021993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021993
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [S...    75   2e-11
ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containi...    74   5e-11
tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea m...    73   6e-11
tpg|DAA41714.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea m...    73   6e-11
tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea m...    73   6e-11

>ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
           gi|241926744|gb|EER99888.1| hypothetical protein
           SORBIDRAFT_02g042500 [Sorghum bicolor]
          Length = 543

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 34/55 (61%), Positives = 44/55 (80%)
 Frame = +2

Query: 5   NVVTYTAMISGLSKEGRSDEAFQLYDDMIDAGLMPDETVCSTLISSQHVQNPRKL 169
           NVV YTA+ISGL+KEGRS+EAFQLYDDM+ AGL PD+++ S L+ S H  N + +
Sbjct: 481 NVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTDNRKDI 535


>ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 33/51 (64%), Positives = 42/51 (82%)
 Frame = +2

Query: 5   NVVTYTAMISGLSKEGRSDEAFQLYDDMIDAGLMPDETVCSTLISSQHVQN 157
           NVV YTA++SGL+KEGRS+EAFQLYDDM+ AGL PD+T+ S L+ S H  +
Sbjct: 497 NVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSLHTDS 547


>tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
          Length = 521

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 33/51 (64%), Positives = 42/51 (82%)
 Frame = +2

Query: 5   NVVTYTAMISGLSKEGRSDEAFQLYDDMIDAGLMPDETVCSTLISSQHVQN 157
           NVV YTA+ISGL+KEGRS+ AFQLYDDM+ AGL+PD+++ S L+ S H  N
Sbjct: 464 NVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDN 514


>tpg|DAA41714.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
          Length = 101

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 33/51 (64%), Positives = 42/51 (82%)
 Frame = +2

Query: 5   NVVTYTAMISGLSKEGRSDEAFQLYDDMIDAGLMPDETVCSTLISSQHVQN 157
           NVV YTA+ISGL+KEGRS+ AFQLYDDM+ AGL+PD+++ S L+ S H  N
Sbjct: 44  NVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDN 94


>tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
          Length = 374

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 33/51 (64%), Positives = 42/51 (82%)
 Frame = +2

Query: 5   NVVTYTAMISGLSKEGRSDEAFQLYDDMIDAGLMPDETVCSTLISSQHVQN 157
           NVV YTA+ISGL+KEGRS+ AFQLYDDM+ AGL+PD+++ S L+ S H  N
Sbjct: 317 NVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDN 367


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