BLASTX nr result
ID: Coptis24_contig00021985
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00021985 (458 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAD38145.1|AF139498_1 porin [Prunus armeniaca] 132 2e-29 gb|ABB02635.1| unknown [Solanum tuberosum] 128 5e-28 gb|ABC01904.1| 34 kDa outer mitochondrial membrane protein porin... 127 7e-28 ref|XP_002312708.1| porin/voltage-dependent anion-selective chan... 127 7e-28 ref|XP_002312786.1| porin/voltage-dependent anion-selective chan... 127 9e-28 >gb|AAD38145.1|AF139498_1 porin [Prunus armeniaca] Length = 276 Score = 132 bits (333), Expect = 2e-29 Identities = 75/152 (49%), Positives = 100/152 (65%) Frame = +3 Query: 3 SLRLTQMPVVDFSCMLGREDLSIGTNVSFNPATRKLTECKYGLRSTMPGYIFSCSLNTKN 182 S+ LT P+V+FS ++G LS+GT++SF+ A+ T+C GL T I S LN K Sbjct: 120 SIGLTANPIVNFSGVVGNNLLSLGTDLSFDTASGNFTKCNAGLNFTHTDLIASLILNDKA 179 Query: 183 DIVTGSLYHLVRSSTCTALGYQFTSNISTFQSKLTVGIQHAMDPLTKVKGCVDNFGTVSA 362 D VT S YH V T TA+G + + + S+ ++ LT+G QHA+DPLT VKG V+N+G SA Sbjct: 180 DTVTASYYHTVSPLTNTAVGAELSHSFSSNENSLTIGTQHALDPLTTVKGRVNNYGRASA 239 Query: 363 TVQKCEWDLWPKSFFTISGEVNVLSILKSAKI 458 +Q EW PKSFFTISGEV+ +I KSAKI Sbjct: 240 LIQH-EWR--PKSFFTISGEVDTRAIEKSAKI 268 >gb|ABB02635.1| unknown [Solanum tuberosum] Length = 171 Score = 128 bits (321), Expect = 5e-28 Identities = 71/151 (47%), Positives = 98/151 (64%) Frame = +3 Query: 3 SLRLTQMPVVDFSCMLGREDLSIGTNVSFNPATRKLTECKYGLRSTMPGYIFSCSLNTKN 182 S+ LT P+V+FS +LG L++GT+VSF+ +T+C GL T I S +LN K Sbjct: 15 SVGLTANPIVNFSGVLGTNVLALGTDVSFDTKAGAITKCNAGLSFTNADLITSLNLNNKG 74 Query: 183 DIVTGSLYHLVRSSTCTALGYQFTSNISTFQSKLTVGIQHAMDPLTKVKGCVDNFGTVSA 362 D ++ S YH+V T TA+G + T + ST ++ +TVG QH +DPLT VK V+NFGT +A Sbjct: 75 DSLSASYYHIVTPLTSTAVGAEVTHSFSTSENTITVGTQHQLDPLTTVKARVNNFGTATA 134 Query: 363 TVQKCEWDLWPKSFFTISGEVNVLSILKSAK 455 +Q EW PKS FTISGEV+ ++ KSAK Sbjct: 135 LIQH-EWR--PKSLFTISGEVDTKAVDKSAK 162 >gb|ABC01904.1| 34 kDa outer mitochondrial membrane protein porin-like protein [Solanum tuberosum] Length = 276 Score = 127 bits (320), Expect = 7e-28 Identities = 71/151 (47%), Positives = 98/151 (64%) Frame = +3 Query: 3 SLRLTQMPVVDFSCMLGREDLSIGTNVSFNPATRKLTECKYGLRSTMPGYIFSCSLNTKN 182 S+ LT P+V+FS +LG L++GT+VSF+ +T+C GL T I S +LN K Sbjct: 120 SVGLTANPIVNFSGVLGTNVLALGTDVSFDTKAGAITKCNAGLSFTNADLITSLNLNNKG 179 Query: 183 DIVTGSLYHLVRSSTCTALGYQFTSNISTFQSKLTVGIQHAMDPLTKVKGCVDNFGTVSA 362 D ++ S YH+V T TA+G + T + ST ++ +TVG QH +DPLT VK V+NFGT +A Sbjct: 180 DSLSASYYHIVTPLTSTAVGAEVTHSFSTNENTITVGTQHQLDPLTTVKARVNNFGTATA 239 Query: 363 TVQKCEWDLWPKSFFTISGEVNVLSILKSAK 455 +Q EW PKS FTISGEV+ ++ KSAK Sbjct: 240 LIQH-EWR--PKSLFTISGEVDTKAVDKSAK 267 >ref|XP_002312708.1| porin/voltage-dependent anion-selective channel protein [Populus trichocarpa] gi|118484777|gb|ABK94257.1| unknown [Populus trichocarpa] gi|222852528|gb|EEE90075.1| porin/voltage-dependent anion-selective channel protein [Populus trichocarpa] Length = 276 Score = 127 bits (320), Expect = 7e-28 Identities = 72/152 (47%), Positives = 99/152 (65%) Frame = +3 Query: 3 SLRLTQMPVVDFSCMLGREDLSIGTNVSFNPATRKLTECKYGLRSTMPGYIFSCSLNTKN 182 SL LT P+V+FS ++G +S+GT++SF+ AT T+ GL T I S ++N K Sbjct: 120 SLGLTANPIVNFSGVIGSNVVSLGTDLSFDTATGNFTKYNAGLSYTNADLIASLTVNDKG 179 Query: 183 DIVTGSLYHLVRSSTCTALGYQFTSNISTFQSKLTVGIQHAMDPLTKVKGCVDNFGTVSA 362 D +T S YH VR T TA+G + T + S+ ++ LT+G QHA+DPLT VK ++N+G SA Sbjct: 180 DTLTASYYHTVRPLTSTAVGAELTRSFSSNENTLTIGTQHALDPLTTVKARLNNYGKASA 239 Query: 363 TVQKCEWDLWPKSFFTISGEVNVLSILKSAKI 458 +Q EW PKS FTISGEV+ +I KSAKI Sbjct: 240 LIQH-EWR--PKSLFTISGEVDTKAIEKSAKI 268 >ref|XP_002312786.1| porin/voltage-dependent anion-selective channel protein [Populus trichocarpa] gi|118481103|gb|ABK92505.1| unknown [Populus trichocarpa] gi|222852606|gb|EEE90153.1| porin/voltage-dependent anion-selective channel protein [Populus trichocarpa] Length = 276 Score = 127 bits (319), Expect = 9e-28 Identities = 70/152 (46%), Positives = 100/152 (65%) Frame = +3 Query: 3 SLRLTQMPVVDFSCMLGREDLSIGTNVSFNPATRKLTECKYGLRSTMPGYIFSCSLNTKN 182 SL LT P+V+FS ++G +++GT++SF+ AT T+C GL T I S ++N K Sbjct: 120 SLGLTANPIVNFSGVVGSNVVALGTDLSFDTATGNFTKCNAGLSYTNSDLIASLTVNDKG 179 Query: 183 DIVTGSLYHLVRSSTCTALGYQFTSNISTFQSKLTVGIQHAMDPLTKVKGCVDNFGTVSA 362 D ++ S YH V T TA+G + T + S+ ++ LT+G QHA+DPLT VK ++N+G VSA Sbjct: 180 DTLSASYYHTVSPLTSTAVGAELTHSFSSNENILTIGTQHALDPLTTVKARLNNYGKVSA 239 Query: 363 TVQKCEWDLWPKSFFTISGEVNVLSILKSAKI 458 +Q EW PKS FTISGEV+ +I KSAK+ Sbjct: 240 LIQN-EWR--PKSLFTISGEVDTKAIEKSAKV 268