BLASTX nr result

ID: Coptis24_contig00021985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021985
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD38145.1|AF139498_1 porin [Prunus armeniaca]                     132   2e-29
gb|ABB02635.1| unknown [Solanum tuberosum]                            128   5e-28
gb|ABC01904.1| 34 kDa outer mitochondrial membrane protein porin...   127   7e-28
ref|XP_002312708.1| porin/voltage-dependent anion-selective chan...   127   7e-28
ref|XP_002312786.1| porin/voltage-dependent anion-selective chan...   127   9e-28

>gb|AAD38145.1|AF139498_1 porin [Prunus armeniaca]
          Length = 276

 Score =  132 bits (333), Expect = 2e-29
 Identities = 75/152 (49%), Positives = 100/152 (65%)
 Frame = +3

Query: 3   SLRLTQMPVVDFSCMLGREDLSIGTNVSFNPATRKLTECKYGLRSTMPGYIFSCSLNTKN 182
           S+ LT  P+V+FS ++G   LS+GT++SF+ A+   T+C  GL  T    I S  LN K 
Sbjct: 120 SIGLTANPIVNFSGVVGNNLLSLGTDLSFDTASGNFTKCNAGLNFTHTDLIASLILNDKA 179

Query: 183 DIVTGSLYHLVRSSTCTALGYQFTSNISTFQSKLTVGIQHAMDPLTKVKGCVDNFGTVSA 362
           D VT S YH V   T TA+G + + + S+ ++ LT+G QHA+DPLT VKG V+N+G  SA
Sbjct: 180 DTVTASYYHTVSPLTNTAVGAELSHSFSSNENSLTIGTQHALDPLTTVKGRVNNYGRASA 239

Query: 363 TVQKCEWDLWPKSFFTISGEVNVLSILKSAKI 458
            +Q  EW   PKSFFTISGEV+  +I KSAKI
Sbjct: 240 LIQH-EWR--PKSFFTISGEVDTRAIEKSAKI 268


>gb|ABB02635.1| unknown [Solanum tuberosum]
          Length = 171

 Score =  128 bits (321), Expect = 5e-28
 Identities = 71/151 (47%), Positives = 98/151 (64%)
 Frame = +3

Query: 3   SLRLTQMPVVDFSCMLGREDLSIGTNVSFNPATRKLTECKYGLRSTMPGYIFSCSLNTKN 182
           S+ LT  P+V+FS +LG   L++GT+VSF+     +T+C  GL  T    I S +LN K 
Sbjct: 15  SVGLTANPIVNFSGVLGTNVLALGTDVSFDTKAGAITKCNAGLSFTNADLITSLNLNNKG 74

Query: 183 DIVTGSLYHLVRSSTCTALGYQFTSNISTFQSKLTVGIQHAMDPLTKVKGCVDNFGTVSA 362
           D ++ S YH+V   T TA+G + T + ST ++ +TVG QH +DPLT VK  V+NFGT +A
Sbjct: 75  DSLSASYYHIVTPLTSTAVGAEVTHSFSTSENTITVGTQHQLDPLTTVKARVNNFGTATA 134

Query: 363 TVQKCEWDLWPKSFFTISGEVNVLSILKSAK 455
            +Q  EW   PKS FTISGEV+  ++ KSAK
Sbjct: 135 LIQH-EWR--PKSLFTISGEVDTKAVDKSAK 162


>gb|ABC01904.1| 34 kDa outer mitochondrial membrane protein porin-like protein
           [Solanum tuberosum]
          Length = 276

 Score =  127 bits (320), Expect = 7e-28
 Identities = 71/151 (47%), Positives = 98/151 (64%)
 Frame = +3

Query: 3   SLRLTQMPVVDFSCMLGREDLSIGTNVSFNPATRKLTECKYGLRSTMPGYIFSCSLNTKN 182
           S+ LT  P+V+FS +LG   L++GT+VSF+     +T+C  GL  T    I S +LN K 
Sbjct: 120 SVGLTANPIVNFSGVLGTNVLALGTDVSFDTKAGAITKCNAGLSFTNADLITSLNLNNKG 179

Query: 183 DIVTGSLYHLVRSSTCTALGYQFTSNISTFQSKLTVGIQHAMDPLTKVKGCVDNFGTVSA 362
           D ++ S YH+V   T TA+G + T + ST ++ +TVG QH +DPLT VK  V+NFGT +A
Sbjct: 180 DSLSASYYHIVTPLTSTAVGAEVTHSFSTNENTITVGTQHQLDPLTTVKARVNNFGTATA 239

Query: 363 TVQKCEWDLWPKSFFTISGEVNVLSILKSAK 455
            +Q  EW   PKS FTISGEV+  ++ KSAK
Sbjct: 240 LIQH-EWR--PKSLFTISGEVDTKAVDKSAK 267


>ref|XP_002312708.1| porin/voltage-dependent anion-selective channel protein [Populus
           trichocarpa] gi|118484777|gb|ABK94257.1| unknown
           [Populus trichocarpa] gi|222852528|gb|EEE90075.1|
           porin/voltage-dependent anion-selective channel protein
           [Populus trichocarpa]
          Length = 276

 Score =  127 bits (320), Expect = 7e-28
 Identities = 72/152 (47%), Positives = 99/152 (65%)
 Frame = +3

Query: 3   SLRLTQMPVVDFSCMLGREDLSIGTNVSFNPATRKLTECKYGLRSTMPGYIFSCSLNTKN 182
           SL LT  P+V+FS ++G   +S+GT++SF+ AT   T+   GL  T    I S ++N K 
Sbjct: 120 SLGLTANPIVNFSGVIGSNVVSLGTDLSFDTATGNFTKYNAGLSYTNADLIASLTVNDKG 179

Query: 183 DIVTGSLYHLVRSSTCTALGYQFTSNISTFQSKLTVGIQHAMDPLTKVKGCVDNFGTVSA 362
           D +T S YH VR  T TA+G + T + S+ ++ LT+G QHA+DPLT VK  ++N+G  SA
Sbjct: 180 DTLTASYYHTVRPLTSTAVGAELTRSFSSNENTLTIGTQHALDPLTTVKARLNNYGKASA 239

Query: 363 TVQKCEWDLWPKSFFTISGEVNVLSILKSAKI 458
            +Q  EW   PKS FTISGEV+  +I KSAKI
Sbjct: 240 LIQH-EWR--PKSLFTISGEVDTKAIEKSAKI 268


>ref|XP_002312786.1| porin/voltage-dependent anion-selective channel protein [Populus
           trichocarpa] gi|118481103|gb|ABK92505.1| unknown
           [Populus trichocarpa] gi|222852606|gb|EEE90153.1|
           porin/voltage-dependent anion-selective channel protein
           [Populus trichocarpa]
          Length = 276

 Score =  127 bits (319), Expect = 9e-28
 Identities = 70/152 (46%), Positives = 100/152 (65%)
 Frame = +3

Query: 3   SLRLTQMPVVDFSCMLGREDLSIGTNVSFNPATRKLTECKYGLRSTMPGYIFSCSLNTKN 182
           SL LT  P+V+FS ++G   +++GT++SF+ AT   T+C  GL  T    I S ++N K 
Sbjct: 120 SLGLTANPIVNFSGVVGSNVVALGTDLSFDTATGNFTKCNAGLSYTNSDLIASLTVNDKG 179

Query: 183 DIVTGSLYHLVRSSTCTALGYQFTSNISTFQSKLTVGIQHAMDPLTKVKGCVDNFGTVSA 362
           D ++ S YH V   T TA+G + T + S+ ++ LT+G QHA+DPLT VK  ++N+G VSA
Sbjct: 180 DTLSASYYHTVSPLTSTAVGAELTHSFSSNENILTIGTQHALDPLTTVKARLNNYGKVSA 239

Query: 363 TVQKCEWDLWPKSFFTISGEVNVLSILKSAKI 458
            +Q  EW   PKS FTISGEV+  +I KSAK+
Sbjct: 240 LIQN-EWR--PKSLFTISGEVDTKAIEKSAKV 268


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