BLASTX nr result

ID: Coptis24_contig00021979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021979
         (1229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30424.3| unnamed protein product [Vitis vinifera]              122   2e-55
ref|XP_002274014.1| PREDICTED: uncharacterized protein LOC100242...   122   5e-53
ref|XP_004147924.1| PREDICTED: uncharacterized protein LOC101218...   118   1e-47
ref|NP_187517.1| uncharacterized protein [Arabidopsis thaliana] ...   109   5e-45
ref|XP_003530257.1| PREDICTED: uncharacterized protein LOC100802...   105   2e-44

>emb|CBI30424.3| unnamed protein product [Vitis vinifera]
          Length = 1454

 Score =  122 bits (307), Expect(2) = 2e-55
 Identities = 66/142 (46%), Positives = 90/142 (63%), Gaps = 1/142 (0%)
 Frame = +2

Query: 590  QIMEKLESRMQAFEETAESNRQEIEEDEKILGDFEGQMDKDRNEGLFFKNLSTRAPXXXX 769
            +IME +ES+MQAF+E++E +R EIE +EK L DFEGQ++K+RNEGLFFKNL  R      
Sbjct: 1307 RIMENMESQMQAFQESSEMSRLEIENNEKKLADFEGQIEKERNEGLFFKNLRQRTTKEKA 1366

Query: 770  XXXXXXXXXXXXXREIAGSKIRKNIYLGLTVLLSVGLADAVIS-ASDWPKXXXXXXXXXX 946
                         +E AGSKIR+NIYL L  +L +G+ D +IS +SDW K          
Sbjct: 1367 EAKEEMEKIRELTKENAGSKIRRNIYLALVAVLVIGIIDNLISPSSDWRKVAVLGAILVA 1426

Query: 947  XXSQFSYEQAMSSKMEKTNKKE 1012
              SQF YEQ M+++ E+T K++
Sbjct: 1427 LLSQFIYEQRMTTEAERTEKEK 1448



 Score =  120 bits (302), Expect(2) = 2e-55
 Identities = 70/137 (51%), Positives = 87/137 (63%), Gaps = 5/137 (3%)
 Frame = +1

Query: 100  SILSFLSFSVHS--TPTYKKKRMNTLKAIQNCFPPSKHVFLKSQKLPSRNSIQLLCKXXX 273
            +ILS L+F V+      Y  K+M  LKA Q  F  +K+V   +++LP + S   LCK   
Sbjct: 1175 AILSLLNFLVYLWIAKWYTYKKMIALKATQTSFTSTKYVLFHTRRLPKKRSTLSLCKSND 1234

Query: 274  XXXXXXXXX---GDIKKQDLLVKIAMLQAQKVRLTDYLDERGKYLTQFAEEANAEFDEIG 444
                        GD +KQ+LL +IAMLQAQKVRLTDYLDER  YLTQFAEEANAEFD+IG
Sbjct: 1235 DDSSPSDGSLPEGDSRKQELLARIAMLQAQKVRLTDYLDERSAYLTQFAEEANAEFDQIG 1294

Query: 445  EDTLKGLDEAEARVCFN 495
            E+ LK L+EA  R+  N
Sbjct: 1295 ENALKELEEAGTRIMEN 1311


>ref|XP_002274014.1| PREDICTED: uncharacterized protein LOC100242508 [Vitis vinifera]
          Length = 258

 Score =  122 bits (307), Expect(2) = 5e-53
 Identities = 66/142 (46%), Positives = 90/142 (63%), Gaps = 1/142 (0%)
 Frame = +2

Query: 590  QIMEKLESRMQAFEETAESNRQEIEEDEKILGDFEGQMDKDRNEGLFFKNLSTRAPXXXX 769
            +IME +ES+MQAF+E++E +R EIE +EK L DFEGQ++K+RNEGLFFKNL  R      
Sbjct: 111  RIMENMESQMQAFQESSEMSRLEIENNEKKLADFEGQIEKERNEGLFFKNLRQRTTKEKA 170

Query: 770  XXXXXXXXXXXXXREIAGSKIRKNIYLGLTVLLSVGLADAVIS-ASDWPKXXXXXXXXXX 946
                         +E AGSKIR+NIYL L  +L +G+ D +IS +SDW K          
Sbjct: 171  EAKEEMEKIRELTKENAGSKIRRNIYLALVAVLVIGIIDNLISPSSDWRKVAVLGAILVA 230

Query: 947  XXSQFSYEQAMSSKMEKTNKKE 1012
              SQF YEQ M+++ E+T K++
Sbjct: 231  LLSQFIYEQRMTTEAERTEKEK 252



 Score =  112 bits (281), Expect(2) = 5e-53
 Identities = 62/115 (53%), Positives = 75/115 (65%), Gaps = 3/115 (2%)
 Frame = +1

Query: 160 MNTLKAIQNCFPPSKHVFLKSQKLPSRNSIQLLCKXXXXXXXXXXXX---GDIKKQDLLV 330
           M  LKA Q  F  +K+V   +++LP + S   LCK               GD +KQ+LL 
Sbjct: 1   MIALKATQTSFTSTKYVLFHTRRLPKKRSTLSLCKSNDDDSSPSDGSLPEGDSRKQELLA 60

Query: 331 KIAMLQAQKVRLTDYLDERGKYLTQFAEEANAEFDEIGEDTLKGLDEAEARVCFN 495
           +IAMLQAQKVRLTDYLDER  YLTQFAEEANAEFD+IGE+ LK L+EA  R+  N
Sbjct: 61  RIAMLQAQKVRLTDYLDERSAYLTQFAEEANAEFDQIGENALKELEEAGTRIMEN 115


>ref|XP_004147924.1| PREDICTED: uncharacterized protein LOC101218084 [Cucumis sativus]
          Length = 257

 Score =  118 bits (295), Expect(2) = 1e-47
 Identities = 63/141 (44%), Positives = 86/141 (60%)
 Frame = +2

Query: 590  QIMEKLESRMQAFEETAESNRQEIEEDEKILGDFEGQMDKDRNEGLFFKNLSTRAPXXXX 769
            +IM  +ES+MQ FEE+ E NRQEIE+++ +L  FEGQ++++RNEGLFF+NL  R P    
Sbjct: 111  RIMGNIESQMQVFEESVELNRQEIEKNDDMLAKFEGQIEEERNEGLFFQNLRPRKPADKV 170

Query: 770  XXXXXXXXXXXXXREIAGSKIRKNIYLGLTVLLSVGLADAVISASDWPKXXXXXXXXXXX 949
                         +E AGSK R+ IYL    LL V +A++ +S+ DW K           
Sbjct: 171  KAKVEMEKINKLTKENAGSKTRRYIYLAFIGLLVVAIAESFLSSPDWRKVAVLGAMLIAL 230

Query: 950  XSQFSYEQAMSSKMEKTNKKE 1012
             SQFSYEQ M+S++EKT  KE
Sbjct: 231  ISQFSYEQRMASEIEKTEIKE 251



 Score = 99.8 bits (247), Expect(2) = 1e-47
 Identities = 57/115 (49%), Positives = 73/115 (63%), Gaps = 3/115 (2%)
 Frame = +1

Query: 160 MNTLKAIQNCFPPSKHVFLKSQKLP-SRNSIQLLCKXXXXXXXXXXXX--GDIKKQDLLV 330
           M   K IQ  F   K+ FL + KLP S+NS   LC+              GD +KQ++L 
Sbjct: 1   MIVFKPIQTSFTVYKNTFLYTPKLPISKNSFSCLCQSNTSDSAPSTPPPEGDPQKQEILA 60

Query: 331 KIAMLQAQKVRLTDYLDERGKYLTQFAEEANAEFDEIGEDTLKGLDEAEARVCFN 495
           +IA LQ QK+RLT +LDE+   LTQFAEEA+AEF++IGED L+GLDEA AR+  N
Sbjct: 61  RIAQLQTQKLRLTGFLDEKSADLTQFAEEADAEFEKIGEDALRGLDEASARIMGN 115


>ref|NP_187517.1| uncharacterized protein [Arabidopsis thaliana]
            gi|5923670|gb|AAD56321.1|AC009326_8 unknown protein
            [Arabidopsis thaliana] gi|44681474|gb|AAS47677.1|
            At3g09050 [Arabidopsis thaliana]
            gi|62320254|dbj|BAD94528.1| hypothetical protein
            [Arabidopsis thaliana] gi|332641193|gb|AEE74714.1|
            uncharacterized protein [Arabidopsis thaliana]
          Length = 258

 Score =  109 bits (272), Expect(2) = 5e-45
 Identities = 60/143 (41%), Positives = 85/143 (59%), Gaps = 2/143 (1%)
 Frame = +2

Query: 590  QIMEKLESRMQAFEETAESNRQEIEEDEKILGDFEGQMDKDRNEGLFFKNLSTRAPXXXX 769
            +I+E +ES+MQAFEE+A  NR EIEE++  L +FE ++  DRNEGLFFK+L  + P    
Sbjct: 116  RILENIESKMQAFEESAGLNRLEIEENDNKLAEFEEKIQVDRNEGLFFKSLRDKKPVDRE 175

Query: 770  XXXXXXXXXXXXXREIAGSKIRKNIYLGLTVLLSVGLADAVISASDWPKXXXXXXXXXXX 949
                         +E AGSK R+NIYLGL  ++ + +AD+ +S+ DW K           
Sbjct: 176  QAREETEKIQEVTKESAGSKSRRNIYLGLIGIVVLAIADSFVSSPDWRKVAILGAILVPL 235

Query: 950  XSQFSYEQAMSSKME--KTNKKE 1012
             +QF YEQ + S+ +  K NKKE
Sbjct: 236  LTQFVYEQTLLSEADKGKENKKE 258



 Score = 99.8 bits (247), Expect(2) = 5e-45
 Identities = 55/120 (45%), Positives = 71/120 (59%), Gaps = 8/120 (6%)
 Frame = +1

Query: 160 MNTLKAIQNCFPPSKHVFLKSQKLPSRNSIQLLC--------KXXXXXXXXXXXXGDIKK 315
           MNTL A Q    P+ HV   + +  S +  Q LC                     GD ++
Sbjct: 2   MNTLHAFQTTLTPNFHVLFNASR-HSLSRPQFLCLSKSGDGTSDSDSDPDPPKPEGDTRR 60

Query: 316 QDLLVKIAMLQAQKVRLTDYLDERGKYLTQFAEEANAEFDEIGEDTLKGLDEAEARVCFN 495
           Q+LL +IAM+Q  KVRLTD+LDER +YLT+FAEEANAEFD++GED +K LDEA  R+  N
Sbjct: 61  QELLARIAMIQTSKVRLTDFLDERSEYLTKFAEEANAEFDKVGEDAMKDLDEASTRILEN 120


>ref|XP_003530257.1| PREDICTED: uncharacterized protein LOC100802123 [Glycine max]
          Length = 256

 Score =  105 bits (261), Expect(2) = 2e-44
 Identities = 60/114 (52%), Positives = 75/114 (65%), Gaps = 2/114 (1%)
 Frame = +1

Query: 160 MNTLKAIQNCFPPS--KHVFLKSQKLPSRNSIQLLCKXXXXXXXXXXXXGDIKKQDLLVK 333
           M  LK+I   F P   K+   +S+ L +++S+  LCK            GDI+KQ+LL +
Sbjct: 1   MIALKSIHPFFTPIYIKYNIHRSRCLNTKDSVLCLCKSNQSESQAPQP-GDIRKQELLAQ 59

Query: 334 IAMLQAQKVRLTDYLDERGKYLTQFAEEANAEFDEIGEDTLKGLDEAEARVCFN 495
           IAMLQ QKVRL DY DER +YLTQF EEA AEFD+IGED L+GLDEA AR+  N
Sbjct: 60  IAMLQTQKVRLMDYFDERSEYLTQFGEEAKAEFDKIGEDALQGLDEASARITAN 113



 Score =  102 bits (253), Expect(2) = 2e-44
 Identities = 63/140 (45%), Positives = 76/140 (54%), Gaps = 1/140 (0%)
 Frame = +2

Query: 590  QIMEKLESRMQAFEETAESNRQEIEEDEKILGDFEGQMDKDRNEGLFFKNLSTRAPXXXX 769
            +I   +ES+M  FEE+AE NRQEI+E EK L  FE QM+  RNEGLFFKNL  +AP    
Sbjct: 109  RITANIESQMVEFEESAELNRQEIQEREKELDKFEVQMEDGRNEGLFFKNLRKKAPVDKA 168

Query: 770  XXXXXXXXXXXXXREIAGSKIRKNIYLGLTVLLSVGLADAVISAS-DWPKXXXXXXXXXX 946
                         RE AGS+ RK IYL    LL+  + D+V S+S DW K          
Sbjct: 169  KAKEEAEKIKDVAREKAGSRTRKGIYLLFIGLLTFAIVDSVASSSTDWRKIAVLGAILVA 228

Query: 947  XXSQFSYEQAMSSKMEKTNK 1006
              SQF YEQ MS +  K  K
Sbjct: 229  LVSQFIYEQTMSIETGKIRK 248


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