BLASTX nr result

ID: Coptis24_contig00021978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021978
         (180 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526724.1| PREDICTED: uncharacterized protein LOC100783...    74   9e-12
ref|NP_680215.1| plastid transcriptionally active7 [Arabidopsis ...    74   1e-11
ref|NP_001190379.1| plastid transcriptionally active7 [Arabidops...    74   1e-11
ref|XP_002872105.1| PDE225/PTAC7 [Arabidopsis lyrata subsp. lyra...    74   1e-11
dbj|BAD95132.1| hypothetical protein [Arabidopsis thaliana]            74   1e-11

>ref|XP_003526724.1| PREDICTED: uncharacterized protein LOC100783539 [Glycine max]
          Length = 162

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 35/46 (76%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
 Frame = +1

Query: 1   RDEYES-KKAILHVLSNRVNDVGFSRPEAYMDPDPYKPGPSYLREE 135
           RDEY   KKAILHVLSNR+ND G  RPEAY +PDP+KPGP YLREE
Sbjct: 115 RDEYGGEKKAILHVLSNRMNDTGIYRPEAYYEPDPFKPGPHYLREE 160


>ref|NP_680215.1| plastid transcriptionally active7 [Arabidopsis thaliana]
           gi|17380656|gb|AAL36158.1| unknown protein [Arabidopsis
           thaliana] gi|21689803|gb|AAM67545.1| unknown protein
           [Arabidopsis thaliana] gi|332005904|gb|AED93287.1|
           plastid transcriptionally active7 [Arabidopsis thaliana]
          Length = 161

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/45 (77%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
 Frame = +1

Query: 1   RDEYE-SKKAILHVLSNRVNDVGFSRPEAYMDPDPYKPGPSYLRE 132
           RDEY  SKKAI HVLSNRVND+GF RPEAY++ DPYKPGP YL E
Sbjct: 114 RDEYGGSKKAIFHVLSNRVNDLGFDRPEAYVEADPYKPGPGYLLE 158


>ref|NP_001190379.1| plastid transcriptionally active7 [Arabidopsis thaliana]
           gi|332005905|gb|AED93288.1| plastid transcriptionally
           active7 [Arabidopsis thaliana]
          Length = 169

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/45 (77%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
 Frame = +1

Query: 1   RDEYE-SKKAILHVLSNRVNDVGFSRPEAYMDPDPYKPGPSYLRE 132
           RDEY  SKKAI HVLSNRVND+GF RPEAY++ DPYKPGP YL E
Sbjct: 122 RDEYGGSKKAIFHVLSNRVNDLGFDRPEAYVEADPYKPGPGYLLE 166


>ref|XP_002872105.1| PDE225/PTAC7 [Arabidopsis lyrata subsp. lyrata]
           gi|297317942|gb|EFH48364.1| PDE225/PTAC7 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 161

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/45 (77%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
 Frame = +1

Query: 1   RDEYE-SKKAILHVLSNRVNDVGFSRPEAYMDPDPYKPGPSYLRE 132
           RDEY  SKKAI HVLSNRVND+GF RPEAY++ DPYKPGP YL E
Sbjct: 114 RDEYGGSKKAIFHVLSNRVNDLGFDRPEAYVEADPYKPGPGYLLE 158


>dbj|BAD95132.1| hypothetical protein [Arabidopsis thaliana]
          Length = 161

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/45 (77%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
 Frame = +1

Query: 1   RDEYE-SKKAILHVLSNRVNDVGFSRPEAYMDPDPYKPGPSYLRE 132
           RDEY  SKKAI HVLSNRVND+GF RPEAY++ DPYKPGP YL E
Sbjct: 114 RDEYGGSKKAIFHVLSNRVNDLGFDRPEAYVEADPYKPGPGYLLE 158


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