BLASTX nr result

ID: Coptis24_contig00021976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021976
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266725.1| PREDICTED: uncharacterized protein LOC100244...   152   3e-35
ref|XP_004146231.1| PREDICTED: uncharacterized protein LOC101217...   143   1e-32
ref|XP_003526724.1| PREDICTED: uncharacterized protein LOC100783...   141   5e-32
ref|NP_680215.1| plastid transcriptionally active7 [Arabidopsis ...   140   1e-31
ref|NP_001190379.1| plastid transcriptionally active7 [Arabidops...   140   1e-31

>ref|XP_002266725.1| PREDICTED: uncharacterized protein LOC100244197 [Vitis vinifera]
           gi|297738342|emb|CBI27543.3| unnamed protein product
           [Vitis vinifera]
          Length = 165

 Score =  152 bits (384), Expect = 3e-35
 Identities = 74/88 (84%), Positives = 83/88 (94%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   VRKIREAGKLLTKDIERLLLSEENRFDFVNEVAAEAKEYMDNNRDEY-GSKKAILHVLSN 178
           VRKI+E GKLLT DIERLLLSE+NRFDFVNEVAAEAKEY++NNRDEY G+KKAILHVLSN
Sbjct: 75  VRKIQEGGKLLTMDIERLLLSEDNRFDFVNEVAAEAKEYVENNRDEYGGNKKAILHVLSN 134

Query: 179 RVNDAGFSRPEAYMDPDPYKPGPGYLRE 262
           RVNDAGF RP+AYM+ +PYKPGPGYL+E
Sbjct: 135 RVNDAGFYRPDAYMESEPYKPGPGYLKE 162


>ref|XP_004146231.1| PREDICTED: uncharacterized protein LOC101217841 [Cucumis sativus]
           gi|449517607|ref|XP_004165837.1| PREDICTED:
           uncharacterized protein LOC101231332 [Cucumis sativus]
          Length = 169

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/89 (76%), Positives = 82/89 (92%), Gaps = 1/89 (1%)
 Frame = +2

Query: 2   VRKIREAGKLLTKDIERLLLSEENRFDFVNEVAAEAKEYMDNNRDEY-GSKKAILHVLSN 178
           VR+++E GKL+T DIERLLLSE+NRFDFVNEVAAEAKEY+++NRDEY G+KKAILHVLSN
Sbjct: 79  VRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGTKKAILHVLSN 138

Query: 179 RVNDAGFSRPEAYMDPDPYKPGPGYLREE 265
           RVNDAGF RP+AY + DP+KPGP YL++E
Sbjct: 139 RVNDAGFYRPDAYAEDDPFKPGPHYLKQE 167


>ref|XP_003526724.1| PREDICTED: uncharacterized protein LOC100783539 [Glycine max]
          Length = 162

 Score =  141 bits (356), Expect = 5e-32
 Identities = 68/89 (76%), Positives = 77/89 (86%), Gaps = 1/89 (1%)
 Frame = +2

Query: 2   VRKIREAGKLLTKDIERLLLSEENRFDFVNEVAAEAKEYMDNNRDEY-GSKKAILHVLSN 178
           VR +RE GKLLT DIERL+LSE+NRFDFVNE+AAEA  Y++NNRDEY G KKAILHVLSN
Sbjct: 72  VRIVREQGKLLTMDIERLMLSEDNRFDFVNEIAAEANSYVENNRDEYGGEKKAILHVLSN 131

Query: 179 RVNDAGFSRPEAYMDPDPYKPGPGYLREE 265
           R+ND G  RPEAY +PDP+KPGP YLREE
Sbjct: 132 RMNDTGIYRPEAYYEPDPFKPGPHYLREE 160


>ref|NP_680215.1| plastid transcriptionally active7 [Arabidopsis thaliana]
           gi|17380656|gb|AAL36158.1| unknown protein [Arabidopsis
           thaliana] gi|21689803|gb|AAM67545.1| unknown protein
           [Arabidopsis thaliana] gi|332005904|gb|AED93287.1|
           plastid transcriptionally active7 [Arabidopsis thaliana]
          Length = 161

 Score =  140 bits (352), Expect = 1e-31
 Identities = 68/88 (77%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   VRKIREAGKLLTKDIERLLLSEENRFDFVNEVAAEAKEYMDNNRDEY-GSKKAILHVLSN 178
           VRKIRE GK++T DIE+LLL E+NRF+FVN VAAEA EY+D NRDEY GSKKAI HVLSN
Sbjct: 71  VRKIREVGKVMTMDIEQLLLREDNRFEFVNSVAAEATEYVDKNRDEYGGSKKAIFHVLSN 130

Query: 179 RVNDAGFSRPEAYMDPDPYKPGPGYLRE 262
           RVND GF RPEAY++ DPYKPGPGYL E
Sbjct: 131 RVNDLGFDRPEAYVEADPYKPGPGYLLE 158


>ref|NP_001190379.1| plastid transcriptionally active7 [Arabidopsis thaliana]
           gi|332005905|gb|AED93288.1| plastid transcriptionally
           active7 [Arabidopsis thaliana]
          Length = 169

 Score =  140 bits (352), Expect = 1e-31
 Identities = 68/88 (77%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   VRKIREAGKLLTKDIERLLLSEENRFDFVNEVAAEAKEYMDNNRDEY-GSKKAILHVLSN 178
           VRKIRE GK++T DIE+LLL E+NRF+FVN VAAEA EY+D NRDEY GSKKAI HVLSN
Sbjct: 79  VRKIREVGKVMTMDIEQLLLREDNRFEFVNSVAAEATEYVDKNRDEYGGSKKAIFHVLSN 138

Query: 179 RVNDAGFSRPEAYMDPDPYKPGPGYLRE 262
           RVND GF RPEAY++ DPYKPGPGYL E
Sbjct: 139 RVNDLGFDRPEAYVEADPYKPGPGYLLE 166


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