BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021971
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]    91   1e-16
emb|CBI14898.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002511274.1| replication factor C / DNA polymerase III ga...    89   3e-16
ref|XP_002318098.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_003522412.1| PREDICTED: uncharacterized protein LOC100819...    84   1e-14

>emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]
          Length = 1057

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 49/78 (62%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
 Frame = -3

Query: 290 MWDGRRHSVDVPFSRTLVALRRVRSLRDPSTNSTTKFSD-VDNFTWETDSCNGISLDHGN 114
           M DGRRHSVD+P S+TLVALRRVRSLRDPSTNS +KFS  VD+  WET+S NGISL   N
Sbjct: 92  MMDGRRHSVDIPISKTLVALRRVRSLRDPSTNSMSKFSALVDSLNWETNSSNGISLRFVN 151

Query: 113 AAHGGVLDNRSPRRSHNF 60
               G  DN       NF
Sbjct: 152 GFQEGGPDNNGXLGLENF 169


>emb|CBI14898.3| unnamed protein product [Vitis vinifera]
          Length = 875

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 49/78 (62%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
 Frame = -3

Query: 290 MWDGRRHSVDVPFSRTLVALRRVRSLRDPSTNSTTKFSD-VDNFTWETDSCNGISLDHGN 114
           M DGRRHSVD+P S+TLVALRRVRSLRDPSTNS +KFS  VD+  WET+S NGISL   N
Sbjct: 1   MMDGRRHSVDIPISKTLVALRRVRSLRDPSTNSMSKFSALVDSLNWETNSSNGISLRFVN 60

Query: 113 AAHGGVLDNRSPRRSHNF 60
               G  DN       NF
Sbjct: 61  GFQEGGPDNNGLLGLENF 78


>ref|XP_002511274.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223550389|gb|EEF51876.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 1025

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 48/90 (53%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
 Frame = -3

Query: 290 MWDGRRHSVDVPFSRTLVALRRVRSLRDPSTNSTTKFSD-VDNFTWETDSCNGISLDHGN 114
           M DGRRHSVD+P SRTL+ALRRVRSLRDPSTN  +KFS  ++N  WET+S NGISL    
Sbjct: 1   MMDGRRHSVDIPISRTLIALRRVRSLRDPSTNCMSKFSALLENVNWETNSTNGISLQFTG 60

Query: 113 AAHGGVLDNRSPRRSHNFVLTERREGPLSD 24
               G  D+    R +N  L   R+  + D
Sbjct: 61  GCQQGGSDHNGFARLNNSGLNRIRDEEIDD 90


>ref|XP_002318098.1| predicted protein [Populus trichocarpa] gi|222858771|gb|EEE96318.1|
           predicted protein [Populus trichocarpa]
          Length = 965

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 46/85 (54%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
 Frame = -3

Query: 290 MWDGRRHSVDVPFSRTLVALRRVRSLRDPSTNSTTKFSD-VDNFTWETDSCNGISLDHGN 114
           M DGRRHSVD+P +RTL+ALRRVRSLRDPSTNS +KFS  ++N TWET+S   IS+   +
Sbjct: 1   MADGRRHSVDIPITRTLIALRRVRSLRDPSTNSMSKFSALLENATWETNSTKEISIQFAD 60

Query: 113 AAHGGVLDNRSPRRSHNFVLTERRE 39
            +  G L++       N  L E RE
Sbjct: 61  VSKEGRLNHTGLSGWKNLGLDEHRE 85


>ref|XP_003522412.1| PREDICTED: uncharacterized protein LOC100819111 [Glycine max]
          Length = 952

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 50/97 (51%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
 Frame = -3

Query: 290 MWDGRRHSVDVPFSRTLVALRRVRSLRDPSTNSTTKFSD-VDNFTWETDSCNGISLDHGN 114
           M DGRRHSVD+P S+TLVALRRVRSLRDP+TNS +K S  VDN  WE  S N ISL   +
Sbjct: 1   MMDGRRHSVDIPISKTLVALRRVRSLRDPTTNSMSKLSSLVDNVHWENGSANEISLRFSD 60

Query: 113 AAHGGVLDNRSPRRSHNFVLTERREGPLSDPELDFVM 3
           A      D+ +  RS N      RE      + DFV+
Sbjct: 61  ATRLCDSDDNAAFRSRNLGFKGHRE----PDDADFVL 93