BLASTX nr result

ID: Coptis24_contig00021970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021970
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282769.1| PREDICTED: proline dehydrogenase 2, mitochon...   247   6e-64
ref|XP_002329313.1| predicted protein [Populus trichocarpa] gi|2...   244   4e-63
gb|AFK36144.1| unknown [Medicago truncatula]                          241   5e-62
gb|ACJ84660.1| unknown [Medicago truncatula]                          241   5e-62
ref|XP_002305291.1| predicted protein [Populus trichocarpa] gi|2...   241   6e-62

>ref|XP_002282769.1| PREDICTED: proline dehydrogenase 2, mitochondrial [Vitis vinifera]
           gi|298204407|emb|CBI16887.3| unnamed protein product
           [Vitis vinifera]
          Length = 500

 Score =  247 bits (631), Expect = 6e-64
 Identities = 120/174 (68%), Positives = 146/174 (83%), Gaps = 1/174 (0%)
 Frame = +1

Query: 1   SSVSYACVKVTAICPISLLKRVSDLLRWEYKDPSFDLPWKLDTLPILSKSSPFYHTLEKP 180
           SSVS+   K+TAIC I LLKRVSDLLRW+++DPSF LPW+ +  PI + SSPFYHTLE+P
Sbjct: 186 SSVSFVIAKMTAICSIDLLKRVSDLLRWQHRDPSFHLPWRQNCFPIFADSSPFYHTLERP 245

Query: 181 EPLSPQEEHDLQQAYERLIKLSENCYDLNLPLLVDAEYTSVQPAIDYLTYSAMMKFNK-Y 357
           +PL+PQEE DLQ A +RL KL + C + NLPL VDAEYTSVQPAIDYLTYSA +++NK  
Sbjct: 246 DPLTPQEEKDLQLALQRLFKLCQKCVEANLPLSVDAEYTSVQPAIDYLTYSAAIQYNKDK 305

Query: 358 SNPIVFGTVQAYLKDAKERTIQATEAAEKMGITMGLKLVRGAYLSSETQLASSL 519
           +NPIV+GT+QAYLKDAKER + A +AA+KMG+ +G KLVRGAY+SSETQLASSL
Sbjct: 306 NNPIVYGTIQAYLKDAKERLLLAVQAADKMGVPIGFKLVRGAYISSETQLASSL 359


>ref|XP_002329313.1| predicted protein [Populus trichocarpa] gi|222870767|gb|EEF07898.1|
           predicted protein [Populus trichocarpa]
          Length = 440

 Score =  244 bits (624), Expect = 4e-63
 Identities = 118/173 (68%), Positives = 143/173 (82%)
 Frame = +1

Query: 1   SSVSYACVKVTAICPISLLKRVSDLLRWEYKDPSFDLPWKLDTLPILSKSSPFYHTLEKP 180
           SSVS    KVTA+CP+SLL+RVSDLLRW+ +DPSF+LPWK ++ PI S SSP YHTL+KP
Sbjct: 143 SSVSSVVAKVTAMCPLSLLERVSDLLRWQQRDPSFNLPWKQNSFPIFSDSSPLYHTLKKP 202

Query: 181 EPLSPQEEHDLQQAYERLIKLSENCYDLNLPLLVDAEYTSVQPAIDYLTYSAMMKFNKYS 360
           EPL+PQEE+DLQ   ERL KL E C  +N+PL VDAE+ SVQPAIDYLTY   +K+NK  
Sbjct: 203 EPLTPQEENDLQLGQERLWKLCEKCVQVNIPLTVDAEHISVQPAIDYLTYLTAIKYNKND 262

Query: 361 NPIVFGTVQAYLKDAKERTIQATEAAEKMGITMGLKLVRGAYLSSETQLASSL 519
           NPIV+GT+QAYLKDAKER + AT+AA+KMG+ MG+KLVRGAY+SSE + ASSL
Sbjct: 263 NPIVYGTIQAYLKDAKERLLLATKAADKMGVPMGIKLVRGAYMSSERKTASSL 315


>gb|AFK36144.1| unknown [Medicago truncatula]
          Length = 489

 Score =  241 bits (615), Expect = 5e-62
 Identities = 115/172 (66%), Positives = 142/172 (82%)
 Frame = +1

Query: 1   SSVSYACVKVTAICPISLLKRVSDLLRWEYKDPSFDLPWKLDTLPILSKSSPFYHTLEKP 180
           SSVS+  VK+TAICP++LL+R+SDLLRW+ KDPSF+LPWK D+LPI S+SSP YHT +KP
Sbjct: 180 SSVSFVIVKITAICPMALLERISDLLRWQQKDPSFNLPWKQDSLPIFSESSPLYHTTKKP 239

Query: 181 EPLSPQEEHDLQQAYERLIKLSENCYDLNLPLLVDAEYTSVQPAIDYLTYSAMMKFNKYS 360
           EPL+PQEE D Q A +RL +L + C + N+PLLVDAE+T+VQPAIDY TYS+ +  NK  
Sbjct: 240 EPLTPQEESDFQLANQRLQQLCKKCVEANMPLLVDAEHTTVQPAIDYFTYSSAIMHNKDD 299

Query: 361 NPIVFGTVQAYLKDAKERTIQATEAAEKMGITMGLKLVRGAYLSSETQLASS 516
           NPIVFGT+Q YLKDAKER   AT+AAEK+GI MG KLVRGAY+S+E+ LA S
Sbjct: 300 NPIVFGTIQTYLKDAKERLFLATQAAEKIGIPMGFKLVRGAYMSTESTLAES 351


>gb|ACJ84660.1| unknown [Medicago truncatula]
          Length = 489

 Score =  241 bits (615), Expect = 5e-62
 Identities = 115/172 (66%), Positives = 142/172 (82%)
 Frame = +1

Query: 1   SSVSYACVKVTAICPISLLKRVSDLLRWEYKDPSFDLPWKLDTLPILSKSSPFYHTLEKP 180
           SSVS+  VK+TAICP++LL+R+SDLLRW+ KDPSF+LPWK D+LPI S+SSP YHT +KP
Sbjct: 180 SSVSFVIVKITAICPMALLERISDLLRWQQKDPSFNLPWKQDSLPIFSESSPLYHTTKKP 239

Query: 181 EPLSPQEEHDLQQAYERLIKLSENCYDLNLPLLVDAEYTSVQPAIDYLTYSAMMKFNKYS 360
           EPL+PQEE D Q A +RL +L + C + N+PLLVDAE+T+VQPAIDY TYS+ +  NK  
Sbjct: 240 EPLTPQEESDFQLANQRLQQLCKKCVEANMPLLVDAEHTTVQPAIDYFTYSSAIMHNKDD 299

Query: 361 NPIVFGTVQAYLKDAKERTIQATEAAEKMGITMGLKLVRGAYLSSETQLASS 516
           NPIVFGT+Q YLKDAKER   AT+AAEK+GI MG KLVRGAY+S+E+ LA S
Sbjct: 300 NPIVFGTIQTYLKDAKERLFLATQAAEKIGIPMGFKLVRGAYMSTESTLAES 351


>ref|XP_002305291.1| predicted protein [Populus trichocarpa] gi|222848255|gb|EEE85802.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score =  241 bits (614), Expect = 6e-62
 Identities = 117/173 (67%), Positives = 143/173 (82%)
 Frame = +1

Query: 1   SSVSYACVKVTAICPISLLKRVSDLLRWEYKDPSFDLPWKLDTLPILSKSSPFYHTLEKP 180
           SSVS   VK+TAICPISLL+RVSDLLRW+ + PSF+LPWK ++ P+ S SSP YHTL+KP
Sbjct: 126 SSVSSVVVKITAICPISLLERVSDLLRWQQRYPSFNLPWKQNSFPLFSDSSPLYHTLKKP 185

Query: 181 EPLSPQEEHDLQQAYERLIKLSENCYDLNLPLLVDAEYTSVQPAIDYLTYSAMMKFNKYS 360
           EPL+PQEEHDLQ   ERL KL E     N+PL VDAE T++QPAIDYLTYSA +K+NK  
Sbjct: 186 EPLTPQEEHDLQLGQERLWKLCEKSVQANIPLTVDAEKTAIQPAIDYLTYSAAIKYNKDD 245

Query: 361 NPIVFGTVQAYLKDAKERTIQATEAAEKMGITMGLKLVRGAYLSSETQLASSL 519
           NPIV+GT+QAYLKDAKER + AT+AA+KM + MG K+VRGAY+SSE++LAS+L
Sbjct: 246 NPIVYGTIQAYLKDAKERLLLATKAADKMRVPMGFKVVRGAYMSSESKLASAL 298


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