BLASTX nr result

ID: Coptis24_contig00021968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021968
         (847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285490.1| PREDICTED: uncharacterized protein LOC100259...   297   2e-78
ref|XP_004141302.1| PREDICTED: uncharacterized protein LOC101204...   291   1e-76
ref|XP_002302384.1| predicted protein [Populus trichocarpa] gi|2...   286   3e-75
ref|XP_002510042.1| conserved hypothetical protein [Ricinus comm...   285   9e-75
ref|XP_003544501.1| PREDICTED: uncharacterized protein LOC100803...   278   1e-72

>ref|XP_002285490.1| PREDICTED: uncharacterized protein LOC100259164 [Vitis vinifera]
          Length = 213

 Score =  297 bits (760), Expect = 2e-78
 Identities = 148/206 (71%), Positives = 173/206 (83%)
 Frame = -2

Query: 834 MDFATSDVSLWKEAISSYKTNLESLNKPQLIQFDDLYRNKLPLQIHNRNPNPYITKSELT 655
           MDF   + S+WKEA+SSY   + SLNKPQL+  DD Y N+LP  I  RNPNPYIT SEL+
Sbjct: 1   MDFQCLNRSVWKEALSSYSARIVSLNKPQLVSLDDFYCNQLPALIRQRNPNPYITTSELS 60

Query: 654 NLMQWKLTRGKWRPRLLDFVSSLDETLVESSSRKAFQSLPDISKAVSELTVLKGVGPATA 475
            LMQWKLTRGKWRPRLLDFVSSLDE LV+S+S+KAFQSLPDISKA+SELTVLKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDEALVKSASQKAFQSLPDISKAISELTVLKGVGPATA 120

Query: 474 SAVLAVFAPDIVPFMSDEAMVAALGSSKDYTLKAYLNFTLKLQSKAKELSIEGEYFTPSD 295
           SA+LA +APD+ PFMSDEAMVAALG+SKDYTLK YL F  KLQ+KA+ELS+EG+ +TPSD
Sbjct: 121 SALLAAYAPDVAPFMSDEAMVAALGNSKDYTLKQYLVFADKLQNKARELSVEGDSYTPSD 180

Query: 294 VEMALWSSAVGSKAVASPSDPDLKMN 217
           VE ALWSSAVG+K + S  + + K+N
Sbjct: 181 VERALWSSAVGTKLLDSLPNSEPKVN 206


>ref|XP_004141302.1| PREDICTED: uncharacterized protein LOC101204707 [Cucumis sativus]
           gi|449509259|ref|XP_004163537.1| PREDICTED:
           uncharacterized LOC101204707 [Cucumis sativus]
          Length = 220

 Score =  291 bits (746), Expect = 1e-76
 Identities = 143/202 (70%), Positives = 168/202 (83%)
 Frame = -2

Query: 834 MDFATSDVSLWKEAISSYKTNLESLNKPQLIQFDDLYRNKLPLQIHNRNPNPYITKSELT 655
           M+F+ SD +LW+EA+S+Y + +E+L KP L+  DD YRN+LPL +H RNP+PYIT SEL+
Sbjct: 2   MEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSELS 61

Query: 654 NLMQWKLTRGKWRPRLLDFVSSLDETLVESSSRKAFQSLPDISKAVSELTVLKGVGPATA 475
            LMQWKLTRGKWRPRLLDFVSSLDE+LV+ +S+KAFQ LPDISKAVSELT LKGVGPATA
Sbjct: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121

Query: 474 SAVLAVFAPDIVPFMSDEAMVAALGSSKDYTLKAYLNFTLKLQSKAKELSIEGEYFTPSD 295
           SAVLA +APD+ PFMSDEAM AALG+SKDY+LK YL F  KL+ KAKELS+EGE FTPSD
Sbjct: 122 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKELSLEGEIFTPSD 181

Query: 294 VEMALWSSAVGSKAVASPSDPD 229
           VE ALWS A+G K   S S  D
Sbjct: 182 VERALWSRAIGEKLKGSKSQLD 203


>ref|XP_002302384.1| predicted protein [Populus trichocarpa] gi|222844110|gb|EEE81657.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  286 bits (733), Expect = 3e-75
 Identities = 141/204 (69%), Positives = 169/204 (82%)
 Frame = -2

Query: 834 MDFATSDVSLWKEAISSYKTNLESLNKPQLIQFDDLYRNKLPLQIHNRNPNPYITKSELT 655
           M+F +SDVSLWK ++S+Y   ++SLNKP L+  DD YR +LP  IH RNP+P+IT  EL+
Sbjct: 1   MEFGSSDVSLWKNSLSAYPARIQSLNKPNLVSLDDFYRIELPSLIHQRNPDPHITTPELS 60

Query: 654 NLMQWKLTRGKWRPRLLDFVSSLDETLVESSSRKAFQSLPDISKAVSELTVLKGVGPATA 475
            LMQWKL+RGKWRPRLLDFVSSLDE+ V+S+S+KAF+SLPD+SKAVS LTVLKGVGPATA
Sbjct: 61  KLMQWKLSRGKWRPRLLDFVSSLDESHVKSASQKAFESLPDVSKAVSALTVLKGVGPATA 120

Query: 474 SAVLAVFAPDIVPFMSDEAMVAALGSSKDYTLKAYLNFTLKLQSKAKELSIEGEYFTPSD 295
           SAVLA +APD+ PFMSDEAM A LG+SKDYTLK YL F  KLQ+K+KELS   + FTPSD
Sbjct: 121 SAVLAAYAPDVAPFMSDEAMEAVLGNSKDYTLKQYLLFVDKLQTKSKELSSVRDIFTPSD 180

Query: 294 VEMALWSSAVGSKAVASPSDPDLK 223
           +E ALWSSAVG+K +A  SDPD K
Sbjct: 181 IERALWSSAVGAKLLALQSDPDSK 204


>ref|XP_002510042.1| conserved hypothetical protein [Ricinus communis]
           gi|223550743|gb|EEF52229.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 217

 Score =  285 bits (729), Expect = 9e-75
 Identities = 143/204 (70%), Positives = 167/204 (81%)
 Frame = -2

Query: 834 MDFATSDVSLWKEAISSYKTNLESLNKPQLIQFDDLYRNKLPLQIHNRNPNPYITKSELT 655
           MDF +SD+SLWKEA++ Y   +ESL K  LI  D+ YR +LP  I  RNPNPYIT  EL+
Sbjct: 1   MDFRSSDISLWKEALADYPARIESLKKSNLISLDEFYRIQLPSLIQKRNPNPYITTPELS 60

Query: 654 NLMQWKLTRGKWRPRLLDFVSSLDETLVESSSRKAFQSLPDISKAVSELTVLKGVGPATA 475
            LMQWKL+RGKWRPRLLD+VSSLDE +V+S+S+KAFQSLPD+SKAV+ELTVLKGVGPATA
Sbjct: 61  KLMQWKLSRGKWRPRLLDYVSSLDEEIVKSASQKAFQSLPDVSKAVTELTVLKGVGPATA 120

Query: 474 SAVLAVFAPDIVPFMSDEAMVAALGSSKDYTLKAYLNFTLKLQSKAKELSIEGEYFTPSD 295
           SAVLA +APD+ PFMSDEAM AALGSSKDYTLK YL+F  KLQ+KAKELS   + FTPSD
Sbjct: 121 SAVLAAYAPDVAPFMSDEAMEAALGSSKDYTLKQYLSFVDKLQTKAKELSSNEDSFTPSD 180

Query: 294 VEMALWSSAVGSKAVASPSDPDLK 223
           VE ALWS AV +K++AS  D D K
Sbjct: 181 VETALWSYAVRAKSLASKEDLDSK 204


>ref|XP_003544501.1| PREDICTED: uncharacterized protein LOC100803511 isoform 1 [Glycine
           max]
          Length = 220

 Score =  278 bits (711), Expect = 1e-72
 Identities = 142/209 (67%), Positives = 165/209 (78%), Gaps = 5/209 (2%)
 Frame = -2

Query: 834 MDFATSDVSLWKEAISSYKTNLESL----NKPQLIQFDDLYRNKLPLQIHNRNPNPYITK 667
           MD   SD S+WKEA+S Y + +++L    NKP L+  DD Y N+LPL +H RNPNP+IT 
Sbjct: 1   MDLGCSDASVWKEALSLYPSRIQTLSVKKNKPDLVSLDDFYCNQLPLLLHQRNPNPFITT 60

Query: 666 SELTNLMQWKLTRGKWRPRLLDFVSSLDETLVESSSRKAFQSLPDISKAVSELTVLKGVG 487
            EL+ LMQWKLTRGKWRPRLLDFVSSLD+ +V+S+S+KAFQSLPD+SKAVSELTVLKGVG
Sbjct: 61  PELSTLMQWKLTRGKWRPRLLDFVSSLDDAVVKSASQKAFQSLPDVSKAVSELTVLKGVG 120

Query: 486 PATASAVLAVFAPDIVPFMSDEAMVAALGSSKDYTLKAYLNFTLKLQSKAKELSIEGEYF 307
           PATASAVLA FAP + PFMSDEAM AALGSSKDY+LK Y+ F  KLQ KA+ELS EG+ F
Sbjct: 121 PATASAVLATFAPHLTPFMSDEAMEAALGSSKDYSLKQYIKFVDKLQRKAEELSSEGDSF 180

Query: 306 TPSDVEMALWSSAVG-SKAVASPSDPDLK 223
           TPSDVE ALWS AVG S    +  DP  K
Sbjct: 181 TPSDVERALWSFAVGQSSGPQADQDPKTK 209


Top