BLASTX nr result

ID: Coptis24_contig00021960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021960
         (836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321011.1| multidrug resistance protein ABC transporter...   337   3e-90
ref|XP_002523063.1| multidrug resistance-associated protein 2, 6...   335   6e-90
ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4...   333   4e-89
dbj|BAE98764.1| MRP-like ABC transporter [Arabidopsis thaliana]       327   2e-87
ref|NP_182301.1| ABC transporter C family member 4 [Arabidopsis ...   327   2e-87

>ref|XP_002321011.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222861784|gb|EEE99326.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1507

 Score =  337 bits (863), Expect = 3e-90
 Identities = 169/278 (60%), Positives = 210/278 (75%)
 Frame = -2

Query: 835  KSPLKIDDIASLAPDHGAEVISKLFESNWPKPSESSKHPVRTTLLRCFWKDFVFTAFLAV 656
            KSPLKIDD+ +L+P+H AE +S+LFES+WPKP E S HPVRTTLLRCFWK+  FTAFLA+
Sbjct: 276  KSPLKIDDVPTLSPEHRAEKMSQLFESSWPKPHEKSNHPVRTTLLRCFWKEISFTAFLAI 335

Query: 655  VRLSVMYMGPVLLQGFVAFSSGKGNSPYEGFYLVAALLVAKIIEVLSSHQFNXXXXXXXX 476
            +RLSVMY+GP+L+Q FV ++SGK  SPYEG+YLV  LLVAK +EVL+ HQFN        
Sbjct: 336  LRLSVMYVGPMLIQSFVDYTSGKRTSPYEGYYLVLILLVAKFVEVLTDHQFNFNSRKLG- 394

Query: 475  XXXXXXXXXXXXXXXXXXXXXMLIRSALITALYKKGLTLSSSSRQAHGLGQIVNYMAVDA 296
                                 MLIR  LIT+LYKKGL LS S+RQAHG+GQIVNYMAVDA
Sbjct: 395  ---------------------MLIRCTLITSLYKKGLMLSCSARQAHGVGQIVNYMAVDA 433

Query: 295  QQLSDMVLQLHNLWLMPCQILVALGLLYIYIGVSALSALLAIIVIMVFVMLNTGRNNKYQ 116
            QQLSDM+LQLH++WLMP Q+ V L LLY  +G SA++AL+  + ++VF + +  RNNK+Q
Sbjct: 434  QQLSDMMLQLHSIWLMPLQVGVGLALLYNALGTSAVTALIGTLGVIVFAVFSNKRNNKFQ 493

Query: 115  YNLMKMKDSRMKATSEMLNNMRVIKFQAWEEYFYKRVQ 2
             N+M  +DSRMKAT+EMLN MRVIKFQAWE++F KR+Q
Sbjct: 494  RNVMINRDSRMKATNEMLNYMRVIKFQAWEDHFNKRIQ 531


>ref|XP_002523063.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223537625|gb|EEF39248.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1506

 Score =  335 bits (860), Expect = 6e-90
 Identities = 170/278 (61%), Positives = 207/278 (74%)
 Frame = -2

Query: 835  KSPLKIDDIASLAPDHGAEVISKLFESNWPKPSESSKHPVRTTLLRCFWKDFVFTAFLAV 656
            KSPLKID++ +L+P+H AE +S+LF + WPKP E SKHPVRTTLLRCFWK+  FTAFLA+
Sbjct: 275  KSPLKIDEVPTLSPEHRAERMSQLFAAKWPKPHEKSKHPVRTTLLRCFWKEIAFTAFLAI 334

Query: 655  VRLSVMYMGPVLLQGFVAFSSGKGNSPYEGFYLVAALLVAKIIEVLSSHQFNXXXXXXXX 476
            +RL VMY+GP+L+Q FV ++SGK  SPYEG+YLV  LLVAK  EVL  HQFN        
Sbjct: 335  MRLCVMYVGPLLIQSFVDYTSGKRTSPYEGYYLVLILLVAKFFEVLIVHQFNFNSQKLG- 393

Query: 475  XXXXXXXXXXXXXXXXXXXXXMLIRSALITALYKKGLTLSSSSRQAHGLGQIVNYMAVDA 296
                                 MLIRS LIT+LY+KGL LS S+RQ+HG+GQIVNYMAVDA
Sbjct: 394  ---------------------MLIRSTLITSLYRKGLRLSCSARQSHGVGQIVNYMAVDA 432

Query: 295  QQLSDMVLQLHNLWLMPCQILVALGLLYIYIGVSALSALLAIIVIMVFVMLNTGRNNKYQ 116
            QQLSDM+LQLH +WLMP Q+ VAL LLY  +GVS ++AL+ I  +MVF +  T RNN++Q
Sbjct: 433  QQLSDMMLQLHAIWLMPLQVTVALVLLYNALGVSVIAALIGIACVMVFALYGTRRNNRFQ 492

Query: 115  YNLMKMKDSRMKATSEMLNNMRVIKFQAWEEYFYKRVQ 2
             NLM  +DSRMKAT+EMLN MRVIKFQAWEE+F KR+Q
Sbjct: 493  KNLMMNRDSRMKATNEMLNYMRVIKFQAWEEHFNKRIQ 530


>ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera]
          Length = 1509

 Score =  333 bits (853), Expect = 4e-89
 Identities = 166/278 (59%), Positives = 210/278 (75%)
 Frame = -2

Query: 835  KSPLKIDDIASLAPDHGAEVISKLFESNWPKPSESSKHPVRTTLLRCFWKDFVFTAFLAV 656
            KSPLKID+I SL+P+H AE +S+LFESNWPKP E   HPVRTTL RCFW++  FTAFLA+
Sbjct: 277  KSPLKIDEIPSLSPEHRAERMSELFESNWPKPHEKLNHPVRTTLFRCFWREVAFTAFLAI 336

Query: 655  VRLSVMYMGPVLLQGFVAFSSGKGNSPYEGFYLVAALLVAKIIEVLSSHQFNXXXXXXXX 476
            VRL V+Y+GP+L+Q FV F+SGK +SPYEG+YLV  LL+AK +EVL+SH FN        
Sbjct: 337  VRLCVIYVGPLLIQRFVDFTSGKRSSPYEGYYLVLILLIAKTVEVLTSHHFNFNSQKLG- 395

Query: 475  XXXXXXXXXXXXXXXXXXXXXMLIRSALITALYKKGLTLSSSSRQAHGLGQIVNYMAVDA 296
                                 MLIRS LIT+LY+KGL LS S+RQ HG+GQIVNYMAVDA
Sbjct: 396  ---------------------MLIRSTLITSLYRKGLRLSCSARQDHGVGQIVNYMAVDA 434

Query: 295  QQLSDMVLQLHNLWLMPCQILVALGLLYIYIGVSALSALLAIIVIMVFVMLNTGRNNKYQ 116
            QQLSDM+LQLH +WLMP Q+ VAL LLY  +G + ++A++ I  +++FV++ T RNN++Q
Sbjct: 435  QQLSDMMLQLHAIWLMPLQVTVALVLLYNELGGAMITAVIGIFAVLLFVLMGTRRNNRFQ 494

Query: 115  YNLMKMKDSRMKATSEMLNNMRVIKFQAWEEYFYKRVQ 2
            +N+MK +D RMKAT+EMLN MRVIKFQAWEE+F KR+Q
Sbjct: 495  HNVMKNRDLRMKATNEMLNYMRVIKFQAWEEHFNKRIQ 532


>dbj|BAE98764.1| MRP-like ABC transporter [Arabidopsis thaliana]
          Length = 1516

 Score =  327 bits (839), Expect = 2e-87
 Identities = 163/277 (58%), Positives = 208/277 (75%)
 Frame = -2

Query: 835  KSPLKIDDIASLAPDHGAEVISKLFESNWPKPSESSKHPVRTTLLRCFWKDFVFTAFLAV 656
            KSPL ++ + +L+P+H AE ++ LFES+WPKPSE+S HP+RTTLLRCFWK+ +FTA LA+
Sbjct: 275  KSPLTLEQVPTLSPEHKAERLALLFESSWPKPSENSSHPIRTTLLRCFWKEILFTAILAI 334

Query: 655  VRLSVMYMGPVLLQGFVAFSSGKGNSPYEGFYLVAALLVAKIIEVLSSHQFNXXXXXXXX 476
            VRL VMY+GPVL+Q FV F+SGK +SP++G+YLV  LLVAK +EVL++HQFN        
Sbjct: 335  VRLGVMYVGPVLIQSFVDFTSGKRSSPWQGYYLVLILLVAKFVEVLTTHQFNFDSQKLG- 393

Query: 475  XXXXXXXXXXXXXXXXXXXXXMLIRSALITALYKKGLTLSSSSRQAHGLGQIVNYMAVDA 296
                                 MLIRS LITALYKKGL L+ S+RQ HG+GQIVNYMAVDA
Sbjct: 394  ---------------------MLIRSTLITALYKKGLKLTGSARQNHGVGQIVNYMAVDA 432

Query: 295  QQLSDMVLQLHNLWLMPCQILVALGLLYIYIGVSALSALLAIIVIMVFVMLNTGRNNKYQ 116
            QQLSDM+LQLH +WLMP Q+ VAL LLY  +G S ++A++ +  + VF++L T RNN YQ
Sbjct: 433  QQLSDMMLQLHAIWLMPLQVTVALVLLYGSLGASVITAVIGLTGVFVFILLGTQRNNGYQ 492

Query: 115  YNLMKMKDSRMKATSEMLNNMRVIKFQAWEEYFYKRV 5
            ++LM  +DSRMKAT+EMLN MRVIKFQAWE +F KR+
Sbjct: 493  FSLMGNRDSRMKATNEMLNYMRVIKFQAWENHFNKRI 529


>ref|NP_182301.1| ABC transporter C family member 4 [Arabidopsis thaliana]
            gi|90103510|sp|Q7DM58.2|AB4C_ARATH RecName: Full=ABC
            transporter C family member 4; Short=ABC transporter
            ABCC.4; Short=AtABCC4; AltName: Full=ATP-energized
            glutathione S-conjugate pump 4; AltName: Full=Glutathione
            S-conjugate-transporting ATPase 4; AltName:
            Full=Multidrug resistance-associated protein 4
            gi|7716583|gb|AAF68441.1|AF243509_1 MRP4 [Arabidopsis
            thaliana] gi|2959767|emb|CAA05625.1| AtMRP4 [Arabidopsis
            thaliana] gi|3738292|gb|AAC63634.1| glutathione-conjugate
            transporter AtMRP4 [Arabidopsis thaliana]
            gi|330255795|gb|AEC10889.1| ABC transporter C family
            member 4 [Arabidopsis thaliana]
          Length = 1516

 Score =  327 bits (839), Expect = 2e-87
 Identities = 163/277 (58%), Positives = 208/277 (75%)
 Frame = -2

Query: 835  KSPLKIDDIASLAPDHGAEVISKLFESNWPKPSESSKHPVRTTLLRCFWKDFVFTAFLAV 656
            KSPL ++ + +L+P+H AE ++ LFES+WPKPSE+S HP+RTTLLRCFWK+ +FTA LA+
Sbjct: 275  KSPLTLEQVPTLSPEHKAERLALLFESSWPKPSENSSHPIRTTLLRCFWKEILFTAILAI 334

Query: 655  VRLSVMYMGPVLLQGFVAFSSGKGNSPYEGFYLVAALLVAKIIEVLSSHQFNXXXXXXXX 476
            VRL VMY+GPVL+Q FV F+SGK +SP++G+YLV  LLVAK +EVL++HQFN        
Sbjct: 335  VRLGVMYVGPVLIQSFVDFTSGKRSSPWQGYYLVLILLVAKFVEVLTTHQFNFDSQKLG- 393

Query: 475  XXXXXXXXXXXXXXXXXXXXXMLIRSALITALYKKGLTLSSSSRQAHGLGQIVNYMAVDA 296
                                 MLIRS LITALYKKGL L+ S+RQ HG+GQIVNYMAVDA
Sbjct: 394  ---------------------MLIRSTLITALYKKGLKLTGSARQNHGVGQIVNYMAVDA 432

Query: 295  QQLSDMVLQLHNLWLMPCQILVALGLLYIYIGVSALSALLAIIVIMVFVMLNTGRNNKYQ 116
            QQLSDM+LQLH +WLMP Q+ VAL LLY  +G S ++A++ +  + VF++L T RNN YQ
Sbjct: 433  QQLSDMMLQLHAIWLMPLQVTVALVLLYGSLGASVITAVIGLTGVFVFILLGTQRNNGYQ 492

Query: 115  YNLMKMKDSRMKATSEMLNNMRVIKFQAWEEYFYKRV 5
            ++LM  +DSRMKAT+EMLN MRVIKFQAWE +F KR+
Sbjct: 493  FSLMGNRDSRMKATNEMLNYMRVIKFQAWENHFNKRI 529


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