BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021944
         (737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278571.1| PREDICTED: small RNA degrading nuclease 5-li...   255   8e-66
emb|CBI19949.3| unnamed protein product [Vitis vinifera]              255   8e-66
ref|XP_002520248.1| rnase h, putative [Ricinus communis] gi|2235...   230   2e-58
ref|XP_003544731.1| PREDICTED: small RNA degrading nuclease 5-li...   223   4e-56
ref|XP_002307475.1| predicted protein [Populus trichocarpa] gi|2...   222   5e-56

>ref|XP_002278571.1| PREDICTED: small RNA degrading nuclease 5-like [Vitis vinifera]
          Length = 572

 Score =  255 bits (651), Expect = 8e-66
 Identities = 126/185 (68%), Positives = 149/185 (80%), Gaps = 2/185 (1%)
 Frame = -1

Query: 566 YFDVYGPQAKAGAVFKSAASDSVLNIQDVQGLVTWVLGEGVNPSWIFVKNKPLIRKVVLL 387
           +FD+YGP+AKA  VFK+  +DS LN+QDVQGLVTWVL EG  PSWIF+KNKPLI KVV+L
Sbjct: 27  FFDIYGPEAKAEVVFKTPDADSTLNLQDVQGLVTWVLAEGFMPSWIFIKNKPLIPKVVML 86

Query: 386 YVPGLDAALYMAHTALLAGLKEICGNPRALLALSCVSDGMQTVDALLTSRVKRKRNESES 207
           YVPGLDAALYM+ + +L+GLKE CGNPRA+LALSCVSD MQT+DALLT ++KRKRNE +S
Sbjct: 87  YVPGLDAALYMSQSKILSGLKEFCGNPRAVLALSCVSDRMQTIDALLTCKLKRKRNEVDS 146

Query: 206 VKKRPDQALEPASTS--SVKPSSTELMKNLPFPILYYTLSAKELEDNGYCTTRPDFVSTG 33
             K+ DQ  E    S  S   SS E++K+LPFPI YYTL+AKELEDNGYC  +P FVST 
Sbjct: 147 ALKKHDQTSEQGGCSGGSNNSSSMEVLKDLPFPITYYTLTAKELEDNGYCHDQPGFVSTL 206

Query: 32  PAPLG 18
           PAP G
Sbjct: 207 PAPSG 211


>emb|CBI19949.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  255 bits (651), Expect = 8e-66
 Identities = 126/185 (68%), Positives = 149/185 (80%), Gaps = 2/185 (1%)
 Frame = -1

Query: 566 YFDVYGPQAKAGAVFKSAASDSVLNIQDVQGLVTWVLGEGVNPSWIFVKNKPLIRKVVLL 387
           +FD+YGP+AKA  VFK+  +DS LN+QDVQGLVTWVL EG  PSWIF+KNKPLI KVV+L
Sbjct: 27  FFDIYGPEAKAEVVFKTPDADSTLNLQDVQGLVTWVLAEGFMPSWIFIKNKPLIPKVVML 86

Query: 386 YVPGLDAALYMAHTALLAGLKEICGNPRALLALSCVSDGMQTVDALLTSRVKRKRNESES 207
           YVPGLDAALYM+ + +L+GLKE CGNPRA+LALSCVSD MQT+DALLT ++KRKRNE +S
Sbjct: 87  YVPGLDAALYMSQSKILSGLKEFCGNPRAVLALSCVSDRMQTIDALLTCKLKRKRNEVDS 146

Query: 206 VKKRPDQALEPASTS--SVKPSSTELMKNLPFPILYYTLSAKELEDNGYCTTRPDFVSTG 33
             K+ DQ  E    S  S   SS E++K+LPFPI YYTL+AKELEDNGYC  +P FVST 
Sbjct: 147 ALKKHDQTSEQGGCSGGSNNSSSMEVLKDLPFPITYYTLTAKELEDNGYCHDQPGFVSTL 206

Query: 32  PAPLG 18
           PAP G
Sbjct: 207 PAPSG 211


>ref|XP_002520248.1| rnase h, putative [Ricinus communis] gi|223540467|gb|EEF42034.1|
           rnase h, putative [Ricinus communis]
          Length = 572

 Score =  230 bits (587), Expect = 2e-58
 Identities = 113/185 (61%), Positives = 141/185 (76%)
 Frame = -1

Query: 566 YFDVYGPQAKAGAVFKSAASDSVLNIQDVQGLVTWVLGEGVNPSWIFVKNKPLIRKVVLL 387
           YFD+YGPQAKA  VFK   ++  LN++DVQGLVTWVL EG  PSW+F+KNKPLI KV +L
Sbjct: 34  YFDIYGPQAKAEIVFKMPEANQTLNLEDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVAML 93

Query: 386 YVPGLDAALYMAHTALLAGLKEICGNPRALLALSCVSDGMQTVDALLTSRVKRKRNESES 207
           ++PGLDA+LY++H+ LLA  KE C NPRALLALSCVSD MQTVDALLT ++KRKR+ ++S
Sbjct: 94  FIPGLDASLYLSHSKLLASFKEYCSNPRALLALSCVSDVMQTVDALLTCKMKRKRDRADS 153

Query: 206 VKKRPDQALEPASTSSVKPSSTELMKNLPFPILYYTLSAKELEDNGYCTTRPDFVSTGPA 27
             ++  Q  E    SS+     ELMK+LPFP  YYTL+ K+LE+N Y  ++P FVST PA
Sbjct: 154 FSRKSMQTSEQGDLSSI-----ELMKDLPFPPTYYTLTTKQLEENDYPISQPGFVSTLPA 208

Query: 26  PLGSS 12
           P GSS
Sbjct: 209 PSGSS 213


>ref|XP_003544731.1| PREDICTED: small RNA degrading nuclease 5-like [Glycine max]
          Length = 567

 Score =  223 bits (567), Expect = 4e-56
 Identities = 107/184 (58%), Positives = 138/184 (75%)
 Frame = -1

Query: 566 YFDVYGPQAKAGAVFKSAASDSVLNIQDVQGLVTWVLGEGVNPSWIFVKNKPLIRKVVLL 387
           ++D+YGP+ KA  VF S   +S LN+ DVQGLVTWVLGEG  PSW+F+KNKPLI KVV+L
Sbjct: 29  FYDIYGPEGKADVVFNSPEDNSTLNLSDVQGLVTWVLGEGFMPSWVFIKNKPLIPKVVML 88

Query: 386 YVPGLDAALYMAHTALLAGLKEICGNPRALLALSCVSDGMQTVDALLTSRVKRKRNESES 207
           YVPGLDAAL+++ + +L  LK  CG PRA+LALSCVSDGMQT+DALLT ++KRKR+E+ S
Sbjct: 89  YVPGLDAALFLSQSKMLPRLKIFCGKPRAVLALSCVSDGMQTIDALLTCKMKRKRDENSS 148

Query: 206 VKKRPDQALEPASTSSVKPSSTELMKNLPFPILYYTLSAKELEDNGYCTTRPDFVSTGPA 27
           + ++     +  S      S  EL K++PFP+ YYTL+ KELE+NGY   +P F+ST PA
Sbjct: 149 IMRKSALTSQQDSL-----SFKELTKDIPFPVTYYTLTEKELEENGYSVNKPGFLSTLPA 203

Query: 26  PLGS 15
           P GS
Sbjct: 204 PSGS 207


>ref|XP_002307475.1| predicted protein [Populus trichocarpa] gi|222856924|gb|EEE94471.1|
           predicted protein [Populus trichocarpa]
          Length = 545

 Score =  222 bits (566), Expect = 5e-56
 Identities = 111/182 (60%), Positives = 136/182 (74%), Gaps = 1/182 (0%)
 Frame = -1

Query: 566 YFDVYGPQAKAGAVFKSAA-SDSVLNIQDVQGLVTWVLGEGVNPSWIFVKNKPLIRKVVL 390
           ++D+YGP A+A  V+K+   + S LN+QDVQGLVTWVL EG  PSW+F+KNKPLI KVV+
Sbjct: 28  FYDIYGPDARAEVVYKTPPETSSTLNLQDVQGLVTWVLSEGFMPSWVFIKNKPLIPKVVM 87

Query: 389 LYVPGLDAALYMAHTALLAGLKEICGNPRALLALSCVSDGMQTVDALLTSRVKRKRNESE 210
           LYVPGLDAALY++ + LLAG KE CGNP  LL+LSCVSDGMQTVDALLT ++KRKRNE +
Sbjct: 88  LYVPGLDAALYISQSKLLAGFKECCGNPMPLLSLSCVSDGMQTVDALLTCKMKRKRNEVD 147

Query: 209 SVKKRPDQALEPASTSSVKPSSTELMKNLPFPILYYTLSAKELEDNGYCTTRPDFVSTGP 30
           SV ++           SV  S   LMK+LPFP+ YYTL+AKELEDNGYC  +P    +G 
Sbjct: 148 SVSRK-----------SVLTSEQGLMKDLPFPLSYYTLTAKELEDNGYCINQPVSAPSGS 196

Query: 29  AP 24
            P
Sbjct: 197 GP 198