BLASTX nr result
ID: Coptis24_contig00021942
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00021942 (229 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera] 47 5e-07 emb|CAN61417.1| hypothetical protein VITISV_009790 [Vitis vinifera] 47 5e-07 emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera] 47 1e-06 emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera] 45 2e-06 emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera] 47 2e-06 >emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera] Length = 1322 Score = 47.0 bits (110), Expect(2) = 5e-07 Identities = 23/43 (53%), Positives = 29/43 (67%) Frame = +2 Query: 77 FQLQDSIYLLKQENTTVYAYFTSLKSLWDELDSLSNVSVCTCG 205 FQ++ I L Q+ TV AY+T LK LWDEL S N +VC+CG Sbjct: 82 FQIERGIACLTQDQMTVAAYYTRLKKLWDELGSY-NDTVCSCG 123 Score = 31.6 bits (70), Expect(2) = 5e-07 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = +1 Query: 16 SASAIWKDLHCRYSQSNAPKI 78 +A +W+DL R+SQSNAP+I Sbjct: 61 TAQEVWEDLRDRFSQSNAPRI 81 >emb|CAN61417.1| hypothetical protein VITISV_009790 [Vitis vinifera] Length = 332 Score = 47.0 bits (110), Expect(2) = 5e-07 Identities = 23/43 (53%), Positives = 29/43 (67%) Frame = +2 Query: 77 FQLQDSIYLLKQENTTVYAYFTSLKSLWDELDSLSNVSVCTCG 205 FQ++ I L Q+ TV AY+T LK LWDEL S N +VC+CG Sbjct: 128 FQIERDIACLTQDQMTVAAYYTRLKKLWDELGSY-NDTVCSCG 169 Score = 31.6 bits (70), Expect(2) = 5e-07 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = +1 Query: 16 SASAIWKDLHCRYSQSNAPKI 78 +A +W+DL R+SQSNAP+I Sbjct: 107 TAQEVWEDLRDRFSQSNAPRI 127 >emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera] Length = 1059 Score = 47.4 bits (111), Expect(2) = 1e-06 Identities = 23/43 (53%), Positives = 29/43 (67%) Frame = +2 Query: 77 FQLQDSIYLLKQENTTVYAYFTSLKSLWDELDSLSNVSVCTCG 205 FQ++ I L Q+ TV AY+T LK LWDEL S N +VC+CG Sbjct: 128 FQIERDIACLTQDQMTVXAYYTRLKKLWDELGSY-NDTVCSCG 169 Score = 29.6 bits (65), Expect(2) = 1e-06 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = +1 Query: 16 SASAIWKDLHCRYSQSNAPKI 78 +A +W+DL +SQSNAP+I Sbjct: 107 TAQEVWEDLRDHFSQSNAPRI 127 >emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera] Length = 1279 Score = 45.1 bits (105), Expect(2) = 2e-06 Identities = 22/43 (51%), Positives = 28/43 (65%) Frame = +2 Query: 77 FQLQDSIYLLKQENTTVYAYFTSLKSLWDELDSLSNVSVCTCG 205 F ++ I L Q+ TV AY+T LK LWDEL S N +VC+CG Sbjct: 128 FXIEXDIACLTQDQMTVAAYYTRLKKLWDELGSY-NDTVCSCG 169 Score = 31.2 bits (69), Expect(2) = 2e-06 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = +1 Query: 16 SASAIWKDLHCRYSQSNAPKI 78 +A +W+DL R+SQSNAP+I Sbjct: 107 TAQEVWEDLXDRFSQSNAPRI 127 >emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera] Length = 1236 Score = 47.0 bits (110), Expect(2) = 2e-06 Identities = 23/43 (53%), Positives = 29/43 (67%) Frame = +2 Query: 77 FQLQDSIYLLKQENTTVYAYFTSLKSLWDELDSLSNVSVCTCG 205 FQ++ I L Q+ TV AY+T LK LWDEL S N +VC+CG Sbjct: 128 FQIERDIACLTQDQMTVAAYYTRLKKLWDELGSY-NDTVCSCG 169 Score = 29.3 bits (64), Expect(2) = 2e-06 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = +1 Query: 16 SASAIWKDLHCRYSQSNAPKI 78 +A +W+DL R+SQ+NAP I Sbjct: 107 TAQEVWEDLRDRFSQTNAPHI 127