BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021941
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31225.3| unnamed protein product [Vitis vinifera]              216   2e-54
ref|XP_002270169.1| PREDICTED: polyribonucleotide nucleotidyltra...   216   2e-54
gb|AAC49669.1| polyribonucleotide phophorylase [Spinacia oleracea]    211   6e-53
prf||2208281A 100RNP protein                                          211   6e-53
ref|XP_004159640.1| PREDICTED: LOW QUALITY PROTEIN: probable pol...   209   1e-52

>emb|CBI31225.3| unnamed protein product [Vitis vinifera]
          Length = 942

 Score =  216 bits (550), Expect = 2e-54
 Identities = 109/137 (79%), Positives = 121/137 (88%), Gaps = 1/137 (0%)
 Frame = +3

Query: 27  IRALKQPKV-DLETVNNEAVDGVLSQQPYSIKIPVGDRHILVETGLIGRQASGSVTVTDG 203
           +RAL + +  ++   + EA  GV   QP+S+KIPVGDRHILVETG IGRQASGSVTVTDG
Sbjct: 52  VRALAESQASEINPSSVEAPPGVA--QPFSVKIPVGDRHILVETGHIGRQASGSVTVTDG 109

Query: 204 ETIVYTSVCLADVPSEPSDFFPLTVNYQERFSAAGRTSGGFFKREGRAKDNEVLTCRLID 383
           ETIVYTSVCLADVPSEPSDFFPL+VNYQERFSAAGRTSGGFFKREGR KD+EVL CRLID
Sbjct: 110 ETIVYTSVCLADVPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRTKDHEVLICRLID 169

Query: 384 RPLRPTMMKGFYHETQV 434
           RPLRPTM+KGFYHETQ+
Sbjct: 170 RPLRPTMLKGFYHETQI 186


>ref|XP_002270169.1| PREDICTED: polyribonucleotide nucleotidyltransferase [Vitis
           vinifera]
          Length = 946

 Score =  216 bits (550), Expect = 2e-54
 Identities = 109/137 (79%), Positives = 121/137 (88%), Gaps = 1/137 (0%)
 Frame = +3

Query: 27  IRALKQPKV-DLETVNNEAVDGVLSQQPYSIKIPVGDRHILVETGLIGRQASGSVTVTDG 203
           +RAL + +  ++   + EA  GV   QP+S+KIPVGDRHILVETG IGRQASGSVTVTDG
Sbjct: 52  VRALAESQASEINPSSVEAPPGVA--QPFSVKIPVGDRHILVETGHIGRQASGSVTVTDG 109

Query: 204 ETIVYTSVCLADVPSEPSDFFPLTVNYQERFSAAGRTSGGFFKREGRAKDNEVLTCRLID 383
           ETIVYTSVCLADVPSEPSDFFPL+VNYQERFSAAGRTSGGFFKREGR KD+EVL CRLID
Sbjct: 110 ETIVYTSVCLADVPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRTKDHEVLICRLID 169

Query: 384 RPLRPTMMKGFYHETQV 434
           RPLRPTM+KGFYHETQ+
Sbjct: 170 RPLRPTMLKGFYHETQI 186


>gb|AAC49669.1| polyribonucleotide phophorylase [Spinacia oleracea]
          Length = 822

 Score =  211 bits (536), Expect = 6e-53
 Identities = 106/141 (75%), Positives = 119/141 (84%)
 Frame = +3

Query: 12  KKFRVIRALKQPKVDLETVNNEAVDGVLSQQPYSIKIPVGDRHILVETGLIGRQASGSVT 191
           KKF V RA+ Q  V  +  ++       S QPYS+KIP GDRHILVETG IGRQASG+VT
Sbjct: 54  KKFNV-RAMAQTHVSQKHAHD-------SLQPYSVKIPFGDRHILVETGHIGRQASGAVT 105

Query: 192 VTDGETIVYTSVCLADVPSEPSDFFPLTVNYQERFSAAGRTSGGFFKREGRAKDNEVLTC 371
           VTDGETIVYT+VC++D+PSEPSDFFPL+VNYQERFSAAGRTSGGFFKREGR KDNEVL C
Sbjct: 106 VTDGETIVYTTVCMSDIPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRPKDNEVLVC 165

Query: 372 RLIDRPLRPTMMKGFYHETQV 434
           RLIDRPLR TM+KGFYHETQ+
Sbjct: 166 RLIDRPLRTTMLKGFYHETQI 186


>prf||2208281A 100RNP protein
          Length = 779

 Score =  211 bits (536), Expect = 6e-53
 Identities = 106/141 (75%), Positives = 119/141 (84%)
 Frame = +3

Query: 12  KKFRVIRALKQPKVDLETVNNEAVDGVLSQQPYSIKIPVGDRHILVETGLIGRQASGSVT 191
           KKF V RA+ Q  V  +  ++       S QPYS+KIP GDRHILVETG IGRQASG+VT
Sbjct: 52  KKFNV-RAMAQTHVSQKHAHD-------SLQPYSVKIPFGDRHILVETGHIGRQASGAVT 103

Query: 192 VTDGETIVYTSVCLADVPSEPSDFFPLTVNYQERFSAAGRTSGGFFKREGRAKDNEVLTC 371
           VTDGETIVYT+VC++D+PSEPSDFFPL+VNYQERFSAAGRTSGGFFKREGR KDNEVL C
Sbjct: 104 VTDGETIVYTTVCMSDIPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRPKDNEVLVC 163

Query: 372 RLIDRPLRPTMMKGFYHETQV 434
           RLIDRPLR TM+KGFYHETQ+
Sbjct: 164 RLIDRPLRTTMLKGFYHETQI 184


>ref|XP_004159640.1| PREDICTED: LOW QUALITY PROTEIN: probable polyribonucleotide
           nucleotidyltransferase 1, chloroplastic-like [Cucumis
           sativus]
          Length = 922

 Score =  209 bits (533), Expect = 1e-52
 Identities = 104/142 (73%), Positives = 119/142 (83%)
 Frame = +3

Query: 9   SKKFRVIRALKQPKVDLETVNNEAVDGVLSQQPYSIKIPVGDRHILVETGLIGRQASGSV 188
           S K  V +AL +  V      ++   G L  +P+S+KIPVGDRHILVETG IGRQAS +V
Sbjct: 56  SAKRLVTKALSESSVPDSVAASDEAPGSL--RPFSVKIPVGDRHILVETGHIGRQASSAV 113

Query: 189 TVTDGETIVYTSVCLADVPSEPSDFFPLTVNYQERFSAAGRTSGGFFKREGRAKDNEVLT 368
           TVTDGETIVYT+VCLAD PSEPSDFFPL+VNYQERFSAAGRTSGGFFKREGRA+D+EVL 
Sbjct: 114 TVTDGETIVYTTVCLADTPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRARDHEVLI 173

Query: 369 CRLIDRPLRPTMMKGFYHETQV 434
           CRLIDRP+RPTM+KGFYHETQ+
Sbjct: 174 CRLIDRPIRPTMLKGFYHETQI 195