BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021935
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]              62   6e-08
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    60   1e-07
gb|EEC69280.1| hypothetical protein OsI_38331 [Oryza sativa Indi...    60   1e-07
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    59   5e-07

>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/73 (41%), Positives = 42/73 (57%)
 Frame = +1

Query: 13  DGTWVEERSGIGDTVVEHFKNIFTSSNPQTHVRDLNILDTVITDEQNNDLTREVTIEEVK 192
           +G W  E   +    V +F+ +F  SNPQ     L+ + T+ITD+ N+ LT   T +EV+
Sbjct: 225 NGKWFAEDKDVQHIAVSYFETLFNKSNPQNIAESLSEVKTLITDQINDFLTTPATEDEVR 284

Query: 193 EALFSMDPHKAPG 231
            ALF M P KAPG
Sbjct: 285 AALFLMHPEKAPG 297


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1621

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/77 (38%), Positives = 45/77 (58%)
 Frame = +1

Query: 1   IRKADGTWVEERSGIGDTVVEHFKNIFTSSNPQTHVRDLNILDTVITDEQNNDLTREVTI 180
           +R+ DG+WVE        ++E FK +FTS+  Q   + L+++D  ++   N  L  E T 
Sbjct: 627 LRREDGSWVEREEDKRAMIIEFFKQLFTSNGGQNSQKLLDVVDRKVSGAMNESLRAEFTR 686

Query: 181 EEVKEALFSMDPHKAPG 231
           EEVKEAL ++   KAPG
Sbjct: 687 EEVKEALDAIGDLKAPG 703


>gb|EEC69280.1| hypothetical protein OsI_38331 [Oryza sativa Indica Group]
          Length = 320

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/77 (38%), Positives = 45/77 (58%)
 Frame = +1

Query: 1   IRKADGTWVEERSGIGDTVVEHFKNIFTSSNPQTHVRDLNILDTVITDEQNNDLTREVTI 180
           +R+ DG+WVE        ++E FK +FTS+  Q   + L+++D  ++   N  L  E T 
Sbjct: 173 LRREDGSWVEREEDKRAMIIEFFKQLFTSNGGQNSQKLLDVVDRKVSGAMNESLRAEFTR 232

Query: 181 EEVKEALFSMDPHKAPG 231
           EEVKEAL ++   KAPG
Sbjct: 233 EEVKEALDAIGDLKAPG 249


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/73 (41%), Positives = 43/73 (58%)
 Frame = +1

Query: 13  DGTWVEERSGIGDTVVEHFKNIFTSSNPQTHVRDLNILDTVITDEQNNDLTREVTIEEVK 192
           +G W  E   I +  V +F+N+FT++NPQ     L  +  +ITD  N+ LT + T  EV+
Sbjct: 159 NGIWSIEDDDIQNIAVSYFQNLFTTANPQVFDEALGEVQVLITDRINDLLTADATECEVR 218

Query: 193 EALFSMDPHKAPG 231
            ALF + P KAPG
Sbjct: 219 AALFMIHPEKAPG 231