BLASTX nr result
ID: Coptis24_contig00021926
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00021926
(1492 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275430.1| PREDICTED: pseudouridine kinase [Vitis vinif... 429 e-118
ref|XP_003607889.1| Sugar kinase, putative [Medicago truncatula]... 400 e-109
ref|XP_002306090.1| predicted protein [Populus trichocarpa] gi|2... 399 e-108
ref|XP_003556290.1| PREDICTED: pseudouridine kinase-like [Glycin... 394 e-107
ref|XP_002519085.1| pentatricopeptide repeat-containing protein,... 386 e-105
>ref|XP_002275430.1| PREDICTED: pseudouridine kinase [Vitis vinifera]
gi|297744710|emb|CBI37972.3| unnamed protein product
[Vitis vinifera]
Length = 426
Score = 429 bits (1104), Expect = e-118
Identities = 213/347 (61%), Positives = 271/347 (78%)
Frame = +3
Query: 3 NVVECMS*LRAKPFMISIIGHDMAGNLLMEYWKSAGLSTEGIEKRQDIGTPVVCNLFDTN 182
N+ ECMS L KP+MIS +G DMAGN+L+E+WKSA LS EGI K DI T VVC++FD +
Sbjct: 81 NIAECMSKLGTKPYMISALGLDMAGNMLLEHWKSARLSMEGIRKHHDIQTSVVCHIFDGD 140
Query: 183 GELTAAVASVEAIEIYLTQEWIQKFSCSISSAPVLMIDANLNPHSLEASCKIAAESNIPV 362
GEL A VASVEAIE +LT +WI++F C+I SAPVLM+DANL+P +LEASC++AAES+ PV
Sbjct: 141 GELAAGVASVEAIENFLTSDWIRQFKCNICSAPVLMVDANLSPSALEASCQMAAESSTPV 200
Query: 363 WFEPVSVTKSKRVASIASYVTFTSPNEDELIAMANAMSPQDRFFPVQTSKGGSKQSIEGL 542
WFEPVSV KS+RVAS+A Y+TF SPNEDELIAMANA+S +D F P+Q G+K SIE L
Sbjct: 201 WFEPVSVIKSRRVASVAKYITFASPNEDELIAMANALSCKDVFHPIQRDYVGTKCSIESL 260
Query: 543 FHMLKPAVLVLLEKGVKIVVVTLGADGVFICTKDGPGFIKNHLRKTKPSASGRRLFEMVT 722
F MLKPA+LVLLEKG+K+VV+TLG+DGVF+C+K+GPGF+ N L+ TKP G +L+E++T
Sbjct: 261 FQMLKPAILVLLEKGIKVVVLTLGSDGVFLCSKEGPGFMNNVLKGTKPQGFGSQLYEIIT 320
Query: 723 VNCPSNKFACDNKFEWRKSQLYAVHFPSLPTPVVRLTGAGDCLVGGTVASICAGLDVMQS 902
+CPSN F + K+ +AVH P+LP V RLTGAGDCLVGGT+AS+CAGLDV+QS
Sbjct: 321 ESCPSNLF-LNIATSSSKTYPFAVHLPALPASVARLTGAGDCLVGGTLASMCAGLDVLQS 379
Query: 903 MAVGIXXXXXXIQVETNVPSTYCLSTVAEDARLIYSLAKVVCDELLL 1043
+A GI ++ ETNVPS Y L+ +A+DAR + S AKV+ +L
Sbjct: 380 VAAGIAAAKAAVEGETNVPSEYSLAKIADDARRVCSSAKVISHRSML 426
>ref|XP_003607889.1| Sugar kinase, putative [Medicago truncatula]
gi|85719355|gb|ABC75360.1| Carbohydrate kinase, PfkB
[Medicago truncatula] gi|355508944|gb|AES90086.1| Sugar
kinase, putative [Medicago truncatula]
Length = 421
Score = 400 bits (1027), Expect = e-109
Identities = 201/347 (57%), Positives = 263/347 (75%)
Frame = +3
Query: 3 NVVECMS*LRAKPFMISIIGHDMAGNLLMEYWKSAGLSTEGIEKRQDIGTPVVCNLFDTN 182
NV ECMS L AKP+MIS +G DMAGNLL+E+WK+AGLSTEGI K +DI TPVVCN+FD N
Sbjct: 76 NVAECMSKLGAKPYMISALGFDMAGNLLLEHWKTAGLSTEGILKNKDIETPVVCNIFDVN 135
Query: 183 GELTAAVASVEAIEIYLTQEWIQKFSCSISSAPVLMIDANLNPHSLEASCKIAAESNIPV 362
GE+ A VASVEA+E YLT +WI F ++ APVLM+DANL+ SLEASCK+AA++ PV
Sbjct: 136 GEVAAGVASVEALEKYLTPDWILCFKSTLLYAPVLMVDANLSGPSLEASCKMAADTGCPV 195
Query: 363 WFEPVSVTKSKRVASIASYVTFTSPNEDELIAMANAMSPQDRFFPVQTSKGGSKQSIEGL 542
WFEPVSVTKS+R+ S+A YVTF SPNEDELIAMANA+S + F P++ S L
Sbjct: 196 WFEPVSVTKSQRIRSVAKYVTFASPNEDELIAMANALSGSNEFRPLKEDHKKDNLSPGSL 255
Query: 543 FHMLKPAVLVLLEKGVKIVVVTLGADGVFICTKDGPGFIKNHLRKTKPSASGRRLFEMVT 722
F +LKPAVLVLL KG+K+V+VTLG++GVF+C+K GP K + KT + G +L++ V
Sbjct: 256 FQILKPAVLVLLGKGIKVVLVTLGSNGVFLCSKGGPSCYKFPVAKTNRTGFGGQLYKSVM 315
Query: 723 VNCPSNKFACDNKFEWRKSQLYAVHFPSLPTPVVRLTGAGDCLVGGTVASICAGLDVMQS 902
NCP N ++ ++ + ++L+AVH PSLP VVRLTGAGDCLVGGT+ SICAGLD+MQS
Sbjct: 316 QNCPPNCYSGFSELD-ISNRLFAVHLPSLPASVVRLTGAGDCLVGGTLTSICAGLDIMQS 374
Query: 903 MAVGIXXXXXXIQVETNVPSTYCLSTVAEDARLIYSLAKVVCDELLL 1043
++VGI ++VETNVPS + L+++A+DAR ++ AKV+ + ++
Sbjct: 375 VSVGIAVAKAAVEVETNVPSAFSLASIADDARSVFCHAKVLLQQSMM 421
>ref|XP_002306090.1| predicted protein [Populus trichocarpa] gi|222849054|gb|EEE86601.1|
predicted protein [Populus trichocarpa]
Length = 384
Score = 399 bits (1024), Expect = e-108
Identities = 203/348 (58%), Positives = 264/348 (75%), Gaps = 1/348 (0%)
Frame = +3
Query: 3 NVVECMS*LRAKPFMISIIGHDMAGNLLMEYWKSAGLSTE-GIEKRQDIGTPVVCNLFDT 179
N+ ECMS L KP+MIS +G+DMAG LL+E+W SA LSTE GI K QDI TPV+CN+FDT
Sbjct: 40 NIAECMSKLGTKPYMISALGNDMAGKLLLEHWNSASLSTEVGIMKHQDIKTPVICNIFDT 99
Query: 180 NGELTAAVASVEAIEIYLTQEWIQKFSCSISSAPVLMIDANLNPHSLEASCKIAAESNIP 359
GEL AAVASVEA+E +LT WIQ+ +I APV+M+DANL+ +LEASC++AAESN P
Sbjct: 100 EGELAAAVASVEAVEKFLTSSWIQQSKQNIFCAPVMMVDANLSLPALEASCQLAAESNTP 159
Query: 360 VWFEPVSVTKSKRVASIASYVTFTSPNEDELIAMANAMSPQDRFFPVQTSKGGSKQSIEG 539
VWFEPVSV KS+R+ S+A YVTF SPNEDELIAMANA+S ++ F ++ S+ S+E
Sbjct: 160 VWFEPVSVAKSRRIVSVAKYVTFASPNEDELIAMANALSHENMFRHIERD-SNSRCSVES 218
Query: 540 LFHMLKPAVLVLLEKGVKIVVVTLGADGVFICTKDGPGFIKNHLRKTKPSASGRRLFEMV 719
LF LKPA+LVLLEKG+KIV VTLGADGVF+C++ GP ++ L +TK +L++ V
Sbjct: 219 LFQFLKPAILVLLEKGIKIVAVTLGADGVFLCSR-GPNVVRFSLDRTKKYGVSGQLYDKV 277
Query: 720 TVNCPSNKFACDNKFEWRKSQLYAVHFPSLPTPVVRLTGAGDCLVGGTVASICAGLDVMQ 899
+CPS++F+ + E R S L++VHFP+LP VVRLTGAGDCLVGGT+AS+C+GLD+MQ
Sbjct: 278 VSSCPSSRFSGALQIE-RSSHLFSVHFPALPASVVRLTGAGDCLVGGTLASLCSGLDIMQ 336
Query: 900 SMAVGIXXXXXXIQVETNVPSTYCLSTVAEDARLIYSLAKVVCDELLL 1043
S+AVGI ++ E NVPS + L+T+ +DAR IYS AK+ + +L
Sbjct: 337 SIAVGIAAAKSAVEGEANVPSEFSLATITDDARSIYSAAKIPFHQSML 384
>ref|XP_003556290.1| PREDICTED: pseudouridine kinase-like [Glycine max]
Length = 390
Score = 394 bits (1013), Expect = e-107
Identities = 202/347 (58%), Positives = 256/347 (73%)
Frame = +3
Query: 3 NVVECMS*LRAKPFMISIIGHDMAGNLLMEYWKSAGLSTEGIEKRQDIGTPVVCNLFDTN 182
NV ECMS L AKP+MIS +G DMAGNLL+ WKSAGLS EGI K +DI TPVVCN+FD N
Sbjct: 46 NVAECMSKLGAKPYMISALGFDMAGNLLLNQWKSAGLSIEGILKDKDIETPVVCNIFDVN 105
Query: 183 GELTAAVASVEAIEIYLTQEWIQKFSCSISSAPVLMIDANLNPHSLEASCKIAAESNIPV 362
GE+ A VASVEA E YLT +WI +F ++ SAPVLM+DANL+ SLEA+CK+A + PV
Sbjct: 106 GEVAAGVASVEAFEKYLTPDWIFRFKNTLLSAPVLMVDANLSHPSLEAACKMAIDMECPV 165
Query: 363 WFEPVSVTKSKRVASIASYVTFTSPNEDELIAMANAMSPQDRFFPVQTSKGGSKQSIEGL 542
WFEPVSVTKS+R++SI YVTF SPNEDELIAMANA+S D F P++ S+ S+ L
Sbjct: 166 WFEPVSVTKSRRISSIVEYVTFASPNEDELIAMANALSGSDEFHPLKESQ-KKNISVLSL 224
Query: 543 FHMLKPAVLVLLEKGVKIVVVTLGADGVFICTKDGPGFIKNHLRKTKPSASGRRLFEMVT 722
F MLKPA+ VLLEKG+K+V+VT G++GVF+C K P K KT +LF+ V
Sbjct: 225 FQMLKPAIWVLLEKGIKVVLVTFGSNGVFLCNKGWPRQFKMPAEKTNQCGFRGQLFKTVM 284
Query: 723 VNCPSNKFACDNKFEWRKSQLYAVHFPSLPTPVVRLTGAGDCLVGGTVASICAGLDVMQS 902
CP ++++ ++ + R S L+AVHFPSLP VVRLTGAGDCLVGGT+ SICAGLD+MQS
Sbjct: 285 QKCPPSRYSGFSELD-RSSHLFAVHFPSLPASVVRLTGAGDCLVGGTLTSICAGLDIMQS 343
Query: 903 MAVGIXXXXXXIQVETNVPSTYCLSTVAEDARLIYSLAKVVCDELLL 1043
++VGI ++VE NVPST+ LS + +DA+ +YS AKV+ + +L
Sbjct: 344 VSVGIAVAKAVVEVEANVPSTFSLSAITDDAKSVYSGAKVLFPQSML 390
>ref|XP_002519085.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223541748|gb|EEF43296.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1157
Score = 386 bits (992), Expect = e-105
Identities = 197/333 (59%), Positives = 247/333 (74%)
Frame = +3
Query: 3 NVVECMS*LRAKPFMISIIGHDMAGNLLMEYWKSAGLSTEGIEKRQDIGTPVVCNLFDTN 182
N+ ECMS L KP+MIS +G+DMAGNLL+E+W SAGLSTEGI+K Q I T V+ N+FD +
Sbjct: 83 NIAECMSKLGTKPYMISALGNDMAGNLLLEHWNSAGLSTEGIQKHQKIRTAVISNIFDAH 142
Query: 183 GELTAAVASVEAIEIYLTQEWIQKFSCSISSAPVLMIDANLNPHSLEASCKIAAESNIPV 362
GE+ A VA VEA+E +LT EWI + C ISSA VL++DANL P +LEASC++AAE NIPV
Sbjct: 143 GEVAAGVADVEAVEKFLTPEWILQCKCKISSASVLLVDANLTPPALEASCQVAAEYNIPV 202
Query: 363 WFEPVSVTKSKRVASIASYVTFTSPNEDELIAMANAMSPQDRFFPVQTSKGGSKQSIEGL 542
WFEPVSV KS R+ASI S VTF SPNEDELIAMANA+S F P+ K S E L
Sbjct: 203 WFEPVSVAKSTRIASIVSDVTFASPNEDELIAMANALSCASIFHPIDRD-SSKKYSTESL 261
Query: 543 FHMLKPAVLVLLEKGVKIVVVTLGADGVFICTKDGPGFIKNHLRKTKPSASGRRLFEMVT 722
F MLKPA+LVLLEKG+K V VTLGA+GVF+C+ + P F + L +TK L++++
Sbjct: 262 FQMLKPAILVLLEKGIKTVAVTLGANGVFLCSTE-PNFTRTRLERTKKYGYNGSLYDIIE 320
Query: 723 VNCPSNKFACDNKFEWRKSQLYAVHFPSLPTPVVRLTGAGDCLVGGTVASICAGLDVMQS 902
+CPS+KF+ D S L AVHFP+LP VVRLTGAGDCLVGGT+AS+C+GLD+MQS
Sbjct: 321 SSCPSSKFS-DALQTQGSSHLLAVHFPTLPASVVRLTGAGDCLVGGTLASLCSGLDIMQS 379
Query: 903 MAVGIXXXXXXIQVETNVPSTYCLSTVAEDARL 1001
MAVGI ++ E NVPS + L+++++DARL
Sbjct: 380 MAVGIVVAKTAVETEGNVPSAFSLASISDDARL 412