BLASTX nr result

ID: Coptis24_contig00021921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021921
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522973.1| PREDICTED: uncharacterized protein LOC100778...    68   2e-09
ref|XP_002446062.1| hypothetical protein SORBIDRAFT_06g001200 [S...    66   8e-09
ref|XP_003598938.1| hypothetical protein MTR_3g023670 [Medicago ...    58   3e-06
ref|XP_003609461.1| hypothetical protein MTR_4g115940 [Medicago ...    57   5e-06

>ref|XP_003522973.1| PREDICTED: uncharacterized protein LOC100778497 [Glycine max]
          Length = 482

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 59/244 (24%), Positives = 107/244 (43%), Gaps = 9/244 (3%)
 Frame = +3

Query: 96  SSECGVLVR--RDVRICYDTFPTALKHTLVDIFETLETSFGFVGRPSINTTYTKKVLGEA 269
           S  CG +V   ++V I ++++    K    + F  L+T F F    S    Y    +   
Sbjct: 168 SGACGRIVTDSKNVPINFESWTKVPKSYKDNCFNILKTLFHFQASESTARRYCLLTMSRK 227

Query: 270 WRRHKSTLYKNLVKGKSPTIVKQ---GPAPEGVNLEDWRVFVDICNTEKFQAASERNTIN 440
           +R  K  L+ +      P++ ++      P G+  + W  F+D     ++Q    +N + 
Sbjct: 228 YRNGKHKLWTSAF---DPSLSREQLIAKVPYGIPEDQWLSFIDNHLKPEYQELCRKNAVV 284

Query: 441 RSKQTAPACVGRTPTQIIRQQIAKEQNKPVHMVARPESYIRIHKRKAPC---TEPVEWEE 611
           R KQT P   G       + ++  E  +P   ++R E YI   K+K       E     E
Sbjct: 285 RQKQTVPHTGGAKLLSRKQHEMEVELGRP---ISRVELYIATRKKKDGSFVNEEARSIGE 341

Query: 612 RINEDMSANSGSPMTITDDAVTRVVGKDSRGRCRAMG-PGVNKTAMKSMEPILDQNYHLA 788
           ++ +++S  +      T+DA+ +V+G+D  GR R +G  G++  A +S E       +L+
Sbjct: 342 KMTQEISECANPTEISTNDALAKVLGRDHCGRVRCLGLGGLHSVAFQSTEKFSGTGRNLS 401

Query: 789 EENS 800
             NS
Sbjct: 402 NSNS 405


>ref|XP_002446062.1| hypothetical protein SORBIDRAFT_06g001200 [Sorghum bicolor]
           gi|241937245|gb|EES10390.1| hypothetical protein
           SORBIDRAFT_06g001200 [Sorghum bicolor]
          Length = 492

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 8/194 (4%)
 Frame = +3

Query: 165 KHTLVDIFETLETSFGFVGRPSINTTYTKKVLGEAWRRHKSTLYKNLVKGKSPTIVKQGP 344
           KH +  I + ++T F +   P     +  K +G  WR++K+TL K L   K    V    
Sbjct: 92  KHNVETIIQFIQTKFLY---PRSCEKWILKSIGRDWRKYKATLKKTLFNPKKKKSVLNER 148

Query: 345 APEGVNLEDWRVFVDICNTEKFQAASERNTINRSKQTAPACVGRTP----TQIIRQQIAK 512
            P+ +N + W+  +    + + QA SE+N I+R  +      G       ++ +RQ  A 
Sbjct: 149 CPDDINEDQWKSLIKYWKSSEGQALSEKNKISREMKKTTHTAGTKSYARWSEDMRQ--AD 206

Query: 513 EQNKPVHMVARPESYIRIHKRKA-PCTEPVEWEERI---NEDMSANSGSPMTITDDAVTR 680
            + K  H   R + Y+  HK++     EPV   E +     +++ N+   +    DA+ R
Sbjct: 207 PEKKQPH---RAKVYLATHKKRGNGINEPVVQLENLLDTQPELAQNTEEGVAWEGDALHR 263

Query: 681 VVGKDSRGRCRAMG 722
           V+G++  G+   MG
Sbjct: 264 VLGEEKSGQVHGMG 277


>ref|XP_003598938.1| hypothetical protein MTR_3g023670 [Medicago truncatula]
           gi|355487986|gb|AES69189.1| hypothetical protein
           MTR_3g023670 [Medicago truncatula]
          Length = 497

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 4/224 (1%)
 Frame = +3

Query: 72  PLAEVSRF-SSECGVLVR--RDVRICYDTFPTALKHTLVDIF-ETLETSFGFVGRPSINT 239
           P+ E + F +S  G L R  RD  I ++++    + T   ++ E ++T F  V     N 
Sbjct: 202 PVGEAAGFLASFLGTLARMYRDFPIMFESWDKIPEKTKTKVYDEKIKTKF--VVDDGDNK 259

Query: 240 TYTKKVLGEAWRRHKSTLYKNLVKGKSPTIVKQGPAPEGVNLEDWRVFVDICNTEKFQAA 419
           +Y    +G  W+  +  L+K   K   P  V     P  +   DW +FV        Q  
Sbjct: 260 SYILTSIGRKWKDERCRLFKEHYKWDLPLEVNLANYPRHIGPTDWALFVAYRRKPDTQKK 319

Query: 420 SERNTINRSKQTAPACVGRTPTQIIRQQIAKEQNKPVHMVARPESYIRIHKRKAPCTEPV 599
           +++N  NR K T P  +G+      + ++  +  +     +R E +   HK         
Sbjct: 320 AQKNVANRKKLTTPHTLGKKSLARKKDELEVKDGRE---YSRAEMFSVSHKDSKGLYVNE 376

Query: 600 EWEERINEDMSANSGSPMTITDDAVTRVVGKDSRGRCRAMGPGV 731
           E +++  +       +P    ++A  +V GK+  G  R+MG G+
Sbjct: 377 EAKKKAEQLQIEMQNTP---ENEAFVKVFGKEHPGYVRSMGLGI 417


>ref|XP_003609461.1| hypothetical protein MTR_4g115940 [Medicago truncatula]
           gi|355510516|gb|AES91658.1| hypothetical protein
           MTR_4g115940 [Medicago truncatula]
          Length = 491

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 52/224 (23%), Positives = 93/224 (41%), Gaps = 4/224 (1%)
 Frame = +3

Query: 72  PLAEVSRF-SSECGVLVR--RDVRICYDTFPTALKHTLVDIF-ETLETSFGFVGRPSINT 239
           P+ E + F +S  G L R  RD  I ++++    + T   ++ E ++T F  V     N 
Sbjct: 196 PVGEAAGFLASFLGTLARMYRDFPIMFESWDKIPEKTKTKVYDEKIKTKF--VVDDGDNK 253

Query: 240 TYTKKVLGEAWRRHKSTLYKNLVKGKSPTIVKQGPAPEGVNLEDWRVFVDICNTEKFQAA 419
           +Y    +G  W+  +  L+K   K   P  V     P  +   DW +FV        Q  
Sbjct: 254 SYILTSIGRKWKDERCRLFKEHYKWDLPLEVNLANYPRHIGPTDWALFVAYRRKPDTQKK 313

Query: 420 SERNTINRSKQTAPACVGRTPTQIIRQQIAKEQNKPVHMVARPESYIRIHKRKAPCTEPV 599
           + +N  NR K T P  +G+      + ++  +  +     +R E +   HK         
Sbjct: 314 ARKNVANRKKLTTPHTLGKKSLARKKDELEVKDGRE---YSRAEMFSVSHKDSKGLYVNE 370

Query: 600 EWEERINEDMSANSGSPMTITDDAVTRVVGKDSRGRCRAMGPGV 731
           E +++  +       +P    ++A  +V GK+  G  R+MG G+
Sbjct: 371 EAKKKAEQLQIEMQNTP---ENEAFVKVFGKEHPGYVRSMGLGI 411


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