BLASTX nr result

ID: Coptis24_contig00021908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021908
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280761.1| PREDICTED: uncharacterized protein LOC100266...   163   1e-38
ref|XP_002280751.1| PREDICTED: uncharacterized protein LOC100266...   163   1e-38
gb|AFW59085.1| hypothetical protein ZEAMMB73_410845 [Zea mays]        147   1e-33
ref|XP_002448407.1| hypothetical protein SORBIDRAFT_06g026620 [S...   145   3e-33
ref|XP_003610894.1| hypothetical protein MTR_5g008220 [Medicago ...   145   4e-33

>ref|XP_002280761.1| PREDICTED: uncharacterized protein LOC100266795 isoform 2 [Vitis
           vinifera]
          Length = 260

 Score =  163 bits (413), Expect = 1e-38
 Identities = 80/124 (64%), Positives = 95/124 (76%)
 Frame = -2

Query: 372 SKYQLLIQKPNQRKKKRGCFKCRAELMQDAPFAIAIGTCVLNSLVFPLPKXXXXXXXXXX 193
           S +  L +  +QR+ ++G   CRAEL QDAPFAIAIG C+LNSLVFP+            
Sbjct: 31  SSFPNLRKSFHQRRIRKGA--CRAELSQDAPFAIAIGACMLNSLVFPITSGADDDGDTVI 88

Query: 192 XXXDARFAVMGIISFIPYFNWLSWIFAWLDTGSKRYVVYSIVYLAPYLRTNLSLSPEESW 13
              DARFAVMGIISFIPYFNWLSW+FAW+DTG +RY++YSIVYLAPYLR+NLSL PE+SW
Sbjct: 89  DSTDARFAVMGIISFIPYFNWLSWVFAWMDTGKRRYIIYSIVYLAPYLRSNLSLLPEDSW 148

Query: 12  LPIA 1
           LPIA
Sbjct: 149 LPIA 152


>ref|XP_002280751.1| PREDICTED: uncharacterized protein LOC100266795 isoform 1 [Vitis
           vinifera] gi|147827011|emb|CAN62288.1| hypothetical
           protein VITISV_034705 [Vitis vinifera]
           gi|297742428|emb|CBI34577.3| unnamed protein product
           [Vitis vinifera]
          Length = 252

 Score =  163 bits (413), Expect = 1e-38
 Identities = 80/124 (64%), Positives = 95/124 (76%)
 Frame = -2

Query: 372 SKYQLLIQKPNQRKKKRGCFKCRAELMQDAPFAIAIGTCVLNSLVFPLPKXXXXXXXXXX 193
           S +  L +  +QR+ ++G   CRAEL QDAPFAIAIG C+LNSLVFP+            
Sbjct: 31  SSFPNLRKSFHQRRIRKGA--CRAELSQDAPFAIAIGACMLNSLVFPITSGADDDGDTVI 88

Query: 192 XXXDARFAVMGIISFIPYFNWLSWIFAWLDTGSKRYVVYSIVYLAPYLRTNLSLSPEESW 13
              DARFAVMGIISFIPYFNWLSW+FAW+DTG +RY++YSIVYLAPYLR+NLSL PE+SW
Sbjct: 89  DSTDARFAVMGIISFIPYFNWLSWVFAWMDTGKRRYIIYSIVYLAPYLRSNLSLLPEDSW 148

Query: 12  LPIA 1
           LPIA
Sbjct: 149 LPIA 152


>gb|AFW59085.1| hypothetical protein ZEAMMB73_410845 [Zea mays]
          Length = 250

 Score =  147 bits (370), Expect = 1e-33
 Identities = 72/120 (60%), Positives = 85/120 (70%), Gaps = 5/120 (4%)
 Frame = -2

Query: 345 PNQRKKKRGCFKCRAELMQDAPFAIAIGTCVLNSLVFPLPKXXXXXXXXXXXXXD----- 181
           P   +++R    CRA+L QDAPFA AIG CVL SLV P P+             +     
Sbjct: 35  PLLTRRRRRALVCRADLQQDAPFAAAIGACVLASLVLPPPRSRGEAGDEVEDEGEFGATD 94

Query: 180 ARFAVMGIISFIPYFNWLSWIFAWLDTGSKRYVVYSIVYLAPYLRTNLSLSPEESWLPIA 1
            R AVMGIISF+PYFNWLSWIFAWLD+G +RY+VY+ VYLAPYLRTNLSLSP+ESWLP+A
Sbjct: 95  TRMAVMGIISFLPYFNWLSWIFAWLDSGRRRYLVYAAVYLAPYLRTNLSLSPDESWLPVA 154


>ref|XP_002448407.1| hypothetical protein SORBIDRAFT_06g026620 [Sorghum bicolor]
           gi|241939590|gb|EES12735.1| hypothetical protein
           SORBIDRAFT_06g026620 [Sorghum bicolor]
          Length = 248

 Score =  145 bits (366), Expect = 3e-33
 Identities = 72/117 (61%), Positives = 83/117 (70%), Gaps = 7/117 (5%)
 Frame = -2

Query: 330 KKRGCFKCRAELMQDAPFAIAIGTCVLNSLVFPLPKXXXXXXXXXXXXXD-------ARF 172
           ++R    CRA+L QDAPFA AIG CVL SLV P P+             +        R 
Sbjct: 36  RRRRSLACRADLQQDAPFAAAIGACVLASLVLPPPRPRGEAVEEVEEEGEFGFGATDTRM 95

Query: 171 AVMGIISFIPYFNWLSWIFAWLDTGSKRYVVYSIVYLAPYLRTNLSLSPEESWLPIA 1
           AVMGIISF+PYFNWLSWIFAWLD+G +RY+VY+ VYLAPYLRTNLSLSP+ESWLPIA
Sbjct: 96  AVMGIISFLPYFNWLSWIFAWLDSGRRRYLVYAAVYLAPYLRTNLSLSPDESWLPIA 152


>ref|XP_003610894.1| hypothetical protein MTR_5g008220 [Medicago truncatula]
           gi|355512229|gb|AES93852.1| hypothetical protein
           MTR_5g008220 [Medicago truncatula]
          Length = 255

 Score =  145 bits (365), Expect = 4e-33
 Identities = 66/103 (64%), Positives = 79/103 (76%)
 Frame = -2

Query: 309 CRAELMQDAPFAIAIGTCVLNSLVFPLPKXXXXXXXXXXXXXDARFAVMGIISFIPYFNW 130
           C+A  + DAPFA AIG C+L SL+ P+P              D R AVMGI+SFIPYFNW
Sbjct: 53  CKAVFVDDAPFAAAIGACMLTSLILPVPVATEEEEESSLTSTDTRLAVMGIMSFIPYFNW 112

Query: 129 LSWIFAWLDTGSKRYVVYSIVYLAPYLRTNLSLSPEESWLPIA 1
           LSW+FAWLDTG++RY VYS+VYLAPYLR+NLS+SPE+SWLPIA
Sbjct: 113 LSWVFAWLDTGNRRYAVYSLVYLAPYLRSNLSISPEDSWLPIA 155


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