BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021905
         (852 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542122.1| PREDICTED: formamidopyrimidine-DNA glycosyla...   112   8e-23
ref|XP_002263635.1| PREDICTED: formamidopyrimidine-DNA glycosyla...   109   7e-22
ref|XP_003597926.1| Formamidopyrimidine-DNA glycosylase [Medicag...   108   2e-21
gb|AAC97952.1| putative formamidopyrimidine-DNA glycosylase 1 [A...   106   8e-21
pdb|3TWL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Fp...   106   8e-21

>ref|XP_003542122.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Glycine max]
          Length = 399

 Score =  112 bits (281), Expect = 8e-23
 Identities = 60/114 (52%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
 Frame = +3

Query: 3   VTEKSVEVGADSSQFPDNWIFHSRDKKPGKAFVDGKRIEFITAGGRTTAYVPELQKLPKD 182
           V EK++EVGA+SSQ+P NWIFHSR+KKPGKAFVDGK+I+FITAGGRTTAYVPELQKL   
Sbjct: 222 VIEKAIEVGAESSQYPTNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLSGS 281

Query: 183 QGVKNTSGQPKRXXXXXXXXXXXXXXXXNPKKNKLNNQGKTRAKDNTST-AKGK 341
             VK T    KR                 P   ++++ G  ++K  T   AKG+
Sbjct: 282 LDVKETGKPNKR---QASKKVRVDDDTEKPTNGEVDDLGSVKSKKGTKAGAKGR 332


>ref|XP_002263635.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Vitis
           vinifera]
          Length = 403

 Score =  109 bits (273), Expect = 7e-22
 Identities = 53/72 (73%), Positives = 62/72 (86%)
 Frame = +3

Query: 3   VTEKSVEVGADSSQFPDNWIFHSRDKKPGKAFVDGKRIEFITAGGRTTAYVPELQKLPKD 182
           V EK++EVGADSSQFP NWIFHSR+KKPGKAFVDGK+I+FI+AGGRTTAYVPELQKL   
Sbjct: 222 VIEKAMEVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFISAGGRTTAYVPELQKLSGT 281

Query: 183 QGVKNTSGQPKR 218
           Q  K  S +P++
Sbjct: 282 QAAK-ASVKPRK 292


>ref|XP_003597926.1| Formamidopyrimidine-DNA glycosylase [Medicago truncatula]
           gi|355486974|gb|AES68177.1| Formamidopyrimidine-DNA
           glycosylase [Medicago truncatula]
          Length = 424

 Score =  108 bits (269), Expect = 2e-21
 Identities = 52/62 (83%), Positives = 55/62 (88%)
 Frame = +3

Query: 15  SVEVGADSSQFPDNWIFHSRDKKPGKAFVDGKRIEFITAGGRTTAYVPELQKLPKDQGVK 194
           SVEVGADSSQ+P NWIFHSR+KKPGKAFVDGK IEFITAGGRTTAYVPELQKL   Q +K
Sbjct: 254 SVEVGADSSQYPTNWIFHSREKKPGKAFVDGKTIEFITAGGRTTAYVPELQKLSGSQVLK 313

Query: 195 NT 200
            T
Sbjct: 314 ET 315


>gb|AAC97952.1| putative formamidopyrimidine-DNA glycosylase 1 [Arabidopsis
           thaliana]
          Length = 390

 Score =  106 bits (264), Expect = 8e-21
 Identities = 51/72 (70%), Positives = 58/72 (80%)
 Frame = +3

Query: 3   VTEKSVEVGADSSQFPDNWIFHSRDKKPGKAFVDGKRIEFITAGGRTTAYVPELQKLPKD 182
           V EK+VEV ADSSQFP NWIFH+R+KKPGKAFVDGK+I+FITAGGRTTAYVPELQKL   
Sbjct: 222 VIEKAVEVDADSSQFPSNWIFHNREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLYGK 281

Query: 183 QGVKNTSGQPKR 218
              K    +P +
Sbjct: 282 DAEKAAKVRPAK 293


>pdb|3TWL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Fpg
           gi|400261074|pdb|3TWM|A Chain A, Crystal Structure Of
           Arabidopsis Thaliana Fpg gi|400261075|pdb|3TWM|B Chain
           B, Crystal Structure Of Arabidopsis Thaliana Fpg
          Length = 310

 Score =  106 bits (264), Expect = 8e-21
 Identities = 51/72 (70%), Positives = 58/72 (80%)
 Frame = +3

Query: 3   VTEKSVEVGADSSQFPDNWIFHSRDKKPGKAFVDGKRIEFITAGGRTTAYVPELQKLPKD 182
           V EK+VEV ADSSQFP NWIFH+R+KKPGKAFVDGK+I+FITAGGRTTAYVPELQKL   
Sbjct: 222 VIEKAVEVDADSSQFPSNWIFHNREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLYGK 281

Query: 183 QGVKNTSGQPKR 218
              K    +P +
Sbjct: 282 DAEKAAKVRPAK 293