BLASTX nr result

ID: Coptis24_contig00021900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021900
         (1113 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280812.1| PREDICTED: NAC domain-containing protein 100...   432   e-119
ref|XP_002527980.1| transcription factor, putative [Ricinus comm...   422   e-115
ref|XP_002330817.1| NAC domain protein, IPR003441 [Populus trich...   410   e-112
ref|XP_004138783.1| PREDICTED: uncharacterized protein LOC101210...   402   e-110
ref|XP_003527816.1| PREDICTED: NAC domain-containing protein 100...   387   e-105

>ref|XP_002280812.1| PREDICTED: NAC domain-containing protein 100 [Vitis vinifera]
           gi|296081784|emb|CBI20789.3| unnamed protein product
           [Vitis vinifera]
          Length = 325

 Score =  432 bits (1112), Expect = e-119
 Identities = 223/320 (69%), Positives = 256/320 (80%), Gaps = 18/320 (5%)
 Frame = +2

Query: 68  ETLPPGFRFHPTDEELITFYLTNKISDATFTARAIADVDLNKCEPWDLPAKAKMGEKEWY 247
           ETLPPGFRFHPTDEELIT YL NKISDATFT RAIADVDLNKCEPW+LP KAKMGEKEWY
Sbjct: 8   ETLPPGFRFHPTDEELITCYLINKISDATFTGRAIADVDLNKCEPWELPGKAKMGEKEWY 67

Query: 248 FFSLRDRKYPTGVRTNRATNAGYWKTTGKDKEIFNSVTSELVGMKKTLVFYKGRAPRGEK 427
           FFSLRDRKYPTGVRTNRATN GYWKTTGKDKEIFNSVTSELVGMKKTLVFY+GRAPRGEK
Sbjct: 68  FFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSVTSELVGMKKTLVFYRGRAPRGEK 127

Query: 428 TNWVMHEYRTHSKTTFRTTKDEWVVCRVFQKSAGGKKYPTNQSRA-HPYNIEMGQNVVAQ 604
           TNWVMHEYR HSK+ FRT+KDEWVVCRVFQKSA GKKYP+NQSR  +PY++++G +V+  
Sbjct: 128 TNWVMHEYRIHSKSAFRTSKDEWVVCRVFQKSAAGKKYPSNQSRGMNPYSLDIGPSVMPP 187

Query: 605 NM-QNDAYHYPIGRNNYVSNADLAELSRVLRGPQSG--NVTMQPQINYP---GNFTISGL 766
            M Q D+  +P+GR NYVSNA+LAEL+RVLRG  +G  N+ +Q Q+NYP   G FTISGL
Sbjct: 188 PMLQADSSQFPMGR-NYVSNAELAELTRVLRGGSTGGLNLPIQSQLNYPLGGGCFTISGL 246

Query: 767 NLNLGGSSAQPIYRPMQQPTLNQHMSATDAMLANHVLTTDS-STDMNAAG---------N 916
           NLNLGG+S QP+ RP   P   Q M+  D M+ + +LT+ S  TD    G         N
Sbjct: 247 NLNLGGTSTQPVLRPNSLPQPMQ-MNQQDHMMTSPMLTSGSIPTDQTGYGAEVNNGNGHN 305

Query: 917 NRFQHM-DPCADIESYWPTY 973
           +RF +M D C D+++YWP Y
Sbjct: 306 SRFMNMVDHCVDLDNYWPPY 325


>ref|XP_002527980.1| transcription factor, putative [Ricinus communis]
            gi|223532606|gb|EEF34392.1| transcription factor,
            putative [Ricinus communis]
          Length = 379

 Score =  422 bits (1084), Expect = e-115
 Identities = 215/320 (67%), Positives = 253/320 (79%), Gaps = 19/320 (5%)
 Frame = +2

Query: 71   TLPPGFRFHPTDEELITFYLTNKISDATFTARAIADVDLNKCEPWDLPAKAKMGEKEWYF 250
            +LPPGFRFHPTDEELIT+YL NKISDA FT RAIADVDLNK EPWDLP KAKMGEKEWYF
Sbjct: 61   SLPPGFRFHPTDEELITYYLINKISDANFTGRAIADVDLNKSEPWDLPGKAKMGEKEWYF 120

Query: 251  FSLRDRKYPTGVRTNRATNAGYWKTTGKDKEIFNSVTSELVGMKKTLVFYKGRAPRGEKT 430
            FSLRDRKYPTGVRTNRATN GYWKTTGKDKEIFNSVTSELVGMKKTLVFY+GRAPRGEKT
Sbjct: 121  FSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSVTSELVGMKKTLVFYRGRAPRGEKT 180

Query: 431  NWVMHEYRTHSKTTFRTTKDEWVVCRVFQKSAGGKKYPTNQSRA-HPYNIEMG-QNVVAQ 604
            NWVMHEYR HSK+ FRT+KDEWVVCRVFQKSAG KKYP NQSRA +PY+++MG  ++ AQ
Sbjct: 181  NWVMHEYRIHSKSAFRTSKDEWVVCRVFQKSAGAKKYPPNQSRAVNPYSLDMGPSSIPAQ 240

Query: 605  NMQ-NDAYHYPIGRNNYVSNADLAELSRVLRGPQSG---NVTMQPQINYP-----GNFTI 757
             MQ  + Y +P+GR NY+S A+LAEL+R  R   S    N+ +Q Q+NYP     G FTI
Sbjct: 241  MMQAAENYQFPVGR-NYMSQAELAELTRAFRAGGSSTSVNLPLQSQMNYPVGAGAGCFTI 299

Query: 758  SGLNLNLGGSSAQPIYRPMQ---QPTLNQHMSATDAMLANHVLTTDSS---TDMNAAG-- 913
            SGLNLNLGG++ QPI+RPMQ    P +NQ   A+  M +N     +++    +MN A   
Sbjct: 300  SGLNLNLGGAATQPIFRPMQPNPPPAMNQQDVASSMMTSNTSFAAEAAGYGAEMNNANAP 359

Query: 914  NNRFQHMDPCADIESYWPTY 973
            ++RF  ++ C D+++YWP+Y
Sbjct: 360  SSRFMGVEHCMDLDNYWPSY 379


>ref|XP_002330817.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222872619|gb|EEF09750.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 316

 Score =  410 bits (1053), Expect = e-112
 Identities = 211/321 (65%), Positives = 239/321 (74%), Gaps = 19/321 (5%)
 Frame = +2

Query: 68  ETLPPGFRFHPTDEELITFYLTNKISDATFTARAIADVDLNKCEPWDLPAKAKMGEKEWY 247
           ETLPPGFRFHPTDEELIT+YL +KISDA F+ RAI DVDLNKCEPWDLP KAKMGEKEWY
Sbjct: 8   ETLPPGFRFHPTDEELITYYLQSKISDADFSCRAIGDVDLNKCEPWDLPGKAKMGEKEWY 67

Query: 248 FFSLRDRKYPTGVRTNRATNAGYWKTTGKDKEIFNSVTSELVGMKKTLVFYKGRAPRGEK 427
           FFSLRDRKYPTGVRTNRATN GYWKTTGKDKEIFNSVTS+LVGMKKTLVFY+GRAPRGEK
Sbjct: 68  FFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSVTSQLVGMKKTLVFYRGRAPRGEK 127

Query: 428 TNWVMHEYRTHSKTTFRTTKDEWVVCRVFQKSAGGKKYPTNQSR-AHPYNIEMGQNVVAQ 604
           TNWVMHEYR HSK  FR +KDEWVVCRVFQKSAG KKYP+NQSR A+PYN+E+G +V+  
Sbjct: 128 TNWVMHEYRFHSKAAFRASKDEWVVCRVFQKSAGVKKYPSNQSRAANPYNLEIGPSVIPS 187

Query: 605 NMQNDA--YHYPIGRNNYVSNADL-AELSRVLR--GPQSGNVTMQPQINYP--------- 742
            M   A  +  PIGRN  +SNA+L AEL+RV R  G    N+ MQ  +N           
Sbjct: 188 QMMQAAENFQLPIGRNYMMSNAELQAELTRVFRAGGSTGINLPMQSPLNNTYSVGGGGPG 247

Query: 743 --GNFTISGLNLNLGGSSAQPIYRPMQQPTLNQHMSATDAMLANHVLTTDSSTDMNAAGN 916
             G FTISGLNLNLGG+++QP+ RPM  P +NQ  +A                +MN A  
Sbjct: 248 GGGCFTISGLNLNLGGAASQPMLRPMAPPVMNQQDAAA------------YGAEMNTANG 295

Query: 917 --NRFQHMDPCADIESYWPTY 973
             NRF  M+ C D+E+YWP Y
Sbjct: 296 HANRFMGMEQCMDLENYWPPY 316


>ref|XP_004138783.1| PREDICTED: uncharacterized protein LOC101210422 [Cucumis sativus]
            gi|449499300|ref|XP_004160780.1| PREDICTED:
            uncharacterized protein LOC101229150 [Cucumis sativus]
          Length = 382

 Score =  402 bits (1033), Expect = e-110
 Identities = 210/329 (63%), Positives = 245/329 (74%), Gaps = 27/329 (8%)
 Frame = +2

Query: 68   ETLPPGFRFHPTDEELITFYLTNKISDATFTARAIADVDLNKCEPWDLPAKAKMGEKEWY 247
            +TLPPGFRFHP+DEELITFYL NKISDA FT RAI DVDLNK EPW+LP KAKMGEKEWY
Sbjct: 55   QTLPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPGKAKMGEKEWY 114

Query: 248  FFSLRDRKYPTGVRTNRATNAGYWKTTGKDKEIFNSVTSELVGMKKTLVFYKGRAPRGEK 427
            FFSLRDRKYPTGVRTNRATN GYWKTTGKDKEIFNS TSEL+GMKKTLVFYKGRAPRGEK
Sbjct: 115  FFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSELIGMKKTLVFYKGRAPRGEK 174

Query: 428  TNWVMHEYRTHSKTTFRTTKDEWVVCRVFQKSAGGKKYPTNQSRA-HPY-NIEMGQNV-- 595
            TNWVMHEYR HSKT FRT KDEWVVCRVFQKS G KKYP NQSRA +PY N+E+  ++  
Sbjct: 175  TNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSPGAKKYPPNQSRAVNPYVNLEIPSSLLP 234

Query: 596  --VAQNMQNDAYHYPIGRNNYVSNADLAELSRVLRGPQSG----------NVTMQPQINY 739
              + Q     A  Y  GR NY+++ +LAEL+RVLR   SG          N++MQPQ NY
Sbjct: 235  PPIMQLGDPSATQYGYGR-NYITSTELAELNRVLRTGGSGGSNGGSTQGINLSMQPQFNY 293

Query: 740  P---GNFTISGLNLNLGGSSAQPIYRPMQQPTLNQHMSATDAMLANHVLTT-------DS 889
            P   G FTISGLNLNLGG  +QP+ R +  P +   M+    + ++ + +T        +
Sbjct: 294  PNTGGCFTISGLNLNLGGGISQPVLRQVPPPPVATTMTIGQDIASSMMASTITPETAYGA 353

Query: 890  STDMNAAG-NNRFQHMDPCADIESYWPTY 973
              + NA+G +NRF +MD C D+E+YWPT+
Sbjct: 354  EINNNASGHSNRFMNMDHCMDLENYWPTW 382


>ref|XP_003527816.1| PREDICTED: NAC domain-containing protein 100-like [Glycine max]
          Length = 338

 Score =  387 bits (995), Expect = e-105
 Identities = 204/340 (60%), Positives = 250/340 (73%), Gaps = 30/340 (8%)
 Frame = +2

Query: 44   MDGVVNEVETLPPGFRFHPTDEELITFYLTNKISDATFTARAIADVDLNKCEPWDLPAKA 223
            M+G   + ETLPPGFRFHPTDEEL+T YL NKISD+ FT RAI DVDLNKCEPW+LP KA
Sbjct: 1    MEGTRAKEETLPPGFRFHPTDEELVTCYLVNKISDSNFTGRAITDVDLNKCEPWELPGKA 60

Query: 224  KMGEKEWYFFSLRDRKYPTGVRTNRATNAGYWKTTGKDKEIFNSVTSELVGMKKTLVFYK 403
            KMGEKEWYFFSLRDRKYPTGVRTNRATNAGYWKTTGKDKEIFNS TSEL+GMKKTLVFYK
Sbjct: 61   KMGEKEWYFFSLRDRKYPTGVRTNRATNAGYWKTTGKDKEIFNSETSELIGMKKTLVFYK 120

Query: 404  GRAPRGEKTNWVMHEYRTHSKTTFRTTK-DEWVVCRVFQKSAGGKKYP-TNQSRA-HPYN 574
            GRAPRGEK+NWVMHEYR HSK+++RT + DEWVVCRVF+KS   KKYP +N +RA +PY+
Sbjct: 121  GRAPRGEKSNWVMHEYRIHSKSSYRTNRQDEWVVCRVFKKSGNAKKYPSSNHARAVNPYS 180

Query: 575  IEMGQNVVAQNMQ---NDAYHYPIGRNNYVSNADLAELSRVLRG---PQSGNVTMQPQIN 736
            +E+  N++   M    +   H+  GR NY+++A+LAEL+RVLRG     S N+ +Q  ++
Sbjct: 181  LEIEPNILPPLMMQLGDPGAHFLYGR-NYMNSAELAELARVLRGGGSTSSVNLPIQSHLS 239

Query: 737  YP------GNFTISGLNLNLGGSSA----QPIYRPMQQP-----TLNQHMSATDAMLANH 871
            YP      G FTISGLNLNLGG  A    QPI RPMQ       T+ Q + A  +M+   
Sbjct: 240  YPTSSSTGGGFTISGLNLNLGGGGATATTQPILRPMQPSPAPVHTMAQVLDANSSMMTTS 299

Query: 872  VLTTDS------STDMNAAGNNRFQHMDPCADIESYWPTY 973
             L  ++       +++N  G NR+  +D C D+++YWP+Y
Sbjct: 300  SLGAENVGYGAEMSNLNLHG-NRYMGVDHCMDLDNYWPSY 338


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