BLASTX nr result
ID: Coptis24_contig00021879
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00021879
(2020 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280254.1| PREDICTED: bifunctional dihydrofolate reduct... 887 0.0
ref|XP_002306118.1| dihydrofolate reductase-thymidylate synthase... 876 0.0
ref|XP_002512938.1| bifunctional dihydrofolate reductase-thymidy... 875 0.0
ref|XP_004148833.1| PREDICTED: bifunctional dihydrofolate reduct... 865 0.0
emb|CBI37680.3| unnamed protein product [Vitis vinifera] 860 0.0
>ref|XP_002280254.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate
synthase-like [Vitis vinifera]
Length = 524
Score = 887 bits (2292), Expect = 0.0
Identities = 428/524 (81%), Positives = 475/524 (90%), Gaps = 4/524 (0%)
Frame = -1
Query: 1864 ADIVANLLNGSSN----PLRTYQVVVAATQTMGIGKDGKLPWNLPSDLKFFKEVTMVTSD 1697
+D V +L NG++N P RTYQVVVAAT+ MGIGKDGKLPW LPSD+K FK++TM +D
Sbjct: 3 SDTVVSLPNGNANIQPDPQRTYQVVVAATRDMGIGKDGKLPWRLPSDMKIFKDITMTVAD 62
Query: 1696 PGKRNAVIMGRKTWESIPPEKRPLPGRLNVVLTRSGSFDIATAENVVICGSMTSALELLA 1517
K+NAVIMGRKTWESIP E RPLPGRLNVVLTRSGSFDIATAENVVICGSM SALELLA
Sbjct: 63 TVKKNAVIMGRKTWESIPLEHRPLPGRLNVVLTRSGSFDIATAENVVICGSMASALELLA 122
Query: 1516 ASPYCLSIEKVFVIGGGQILKEALNAPECDAVHITEISTSIECDTFMPPVDHSIYRPWYS 1337
ASPYCLSIEKVFVIGGGQIL+EALNAP CDA+HITEI TS ECDTF+P +D +++PWYS
Sbjct: 123 ASPYCLSIEKVFVIGGGQILREALNAPGCDAIHITEIETSFECDTFIPAIDSLVFQPWYS 182
Query: 1336 SFPLVENNILLSYVSYIRVRQSALESVTFNNGDISNGSNSVKLEVDKSSSLPKMIFEKHK 1157
SFPLVENNI S+++Y+RVR SA ES NNGD +G S+K EV K S LPKMIFE+H+
Sbjct: 183 SFPLVENNIRYSFMTYVRVRSSADESQIQNNGD--SGLESIKFEVKKFSFLPKMIFERHE 240
Query: 1156 EYMYLKLVQDIISNGIQKDDRTGTGTLSKFGCQMRFNLRKSFPLLTTKKVFWRGVVEELL 977
EY+YL+LV+DIISNG+Q+DDRTGTGTLSKFGCQMRFNLRK+FPLLTTKKVFWRGVVEELL
Sbjct: 241 EYIYLRLVEDIISNGVQRDDRTGTGTLSKFGCQMRFNLRKTFPLLTTKKVFWRGVVEELL 300
Query: 976 WFISGSTNAKVLQEKGIRIWDGNASRDYLDSIGLTDREDGDLGPIYGFQWRHFGARYTNM 797
WFISGSTNAKVLQEKGI IWDGNASRDYLDSIGL DRE+GDLGPIYGFQWRHFGA Y +M
Sbjct: 301 WFISGSTNAKVLQEKGIHIWDGNASRDYLDSIGLADREEGDLGPIYGFQWRHFGASYIDM 360
Query: 796 HADYTGQGFDQLLDVIEKVKNKPDDRRIILSAWNPADLKLMALPPCHMFAQFYVANGELS 617
HADYTGQGFDQLLDVI K+KN P+DRRIILSAWNP+DLKLMALPPCHMFAQFYV++GELS
Sbjct: 361 HADYTGQGFDQLLDVINKIKNNPNDRRIILSAWNPSDLKLMALPPCHMFAQFYVSHGELS 420
Query: 616 CQMYQRSADLGLGVPFNIASYALLTCMIAHVCDVVPGDFIHVIGDAHVYKTHVRPLQEQL 437
CQMYQRSAD+GLGVPFNIASYALLTCMIAHVCD+VPGDFIHVIGD+HVY TH+RPLQEQL
Sbjct: 421 CQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDSHVYLTHIRPLQEQL 480
Query: 436 QRLPKPFPILKINPQKKDIDSFTAADLELIGYYPHQKIEMQMAI 305
Q+LPKPFPILKINPQKK+IDSF AAD +LIGY PHQKIEM+MA+
Sbjct: 481 QKLPKPFPILKINPQKKNIDSFVAADFQLIGYDPHQKIEMKMAV 524
>ref|XP_002306118.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa]
gi|222849082|gb|EEE86629.1| dihydrofolate
reductase-thymidylate synthase [Populus trichocarpa]
Length = 528
Score = 876 bits (2263), Expect = 0.0
Identities = 419/525 (79%), Positives = 476/525 (90%), Gaps = 6/525 (1%)
Frame = -1
Query: 1861 DIVANLLNGSSN-----PLRTYQVVVAATQTMGIGKDGKLPWNLPSDLKFFKEVTMVTSD 1697
D VANL NG++N P +TYQVVVAAT+ MGIGKDGKLPW LPSDLKFFK++T+ T D
Sbjct: 4 DSVANLSNGNANTQQSDPRKTYQVVVAATKDMGIGKDGKLPWKLPSDLKFFKDLTLTTMD 63
Query: 1696 PGKRNAVIMGRKTWESIPPEKRPLPGRLNVVLTRSGSFDIATAENVVICGSMTSALELLA 1517
GK+NAVIMGRKTWESIP E RPLPGRLNVVLTRSGSFDIATAENVVICGSM SALELLA
Sbjct: 64 SGKKNAVIMGRKTWESIPLEHRPLPGRLNVVLTRSGSFDIATAENVVICGSMGSALELLA 123
Query: 1516 ASPYCLSIEKVFVIGGGQILKEALNAPECDAVHITEISTSIECDTFMPPVDHSIYRPWYS 1337
ASPYCLSIEKVFVIGGGQIL+E+LNAP CDA+HITEI T +CDTF+P +D S+++PWYS
Sbjct: 124 ASPYCLSIEKVFVIGGGQILRESLNAPGCDAIHITEIETDFDCDTFIPAIDTSVFQPWYS 183
Query: 1336 SFPLVENNILLSYVSYIRVRQSALESVTFNNGDISNG-SNSVKLEVDKSSSLPKMIFEKH 1160
SFP VEN+I + +Y+RVR S +ES + NNG+ S+G S + K EV K S LPKM+FE+H
Sbjct: 184 SFPKVENDIRHCFTTYVRVRSSTIESHSQNNGENSDGNSENSKFEVKKFSFLPKMVFERH 243
Query: 1159 KEYMYLKLVQDIISNGIQKDDRTGTGTLSKFGCQMRFNLRKSFPLLTTKKVFWRGVVEEL 980
+EY+YL++VQDIIS+G KDDRTGTGTLSKFGCQMRFNLRK+FPLLTTKKVFWRGVVEEL
Sbjct: 244 EEYLYLRMVQDIISDGNLKDDRTGTGTLSKFGCQMRFNLRKNFPLLTTKKVFWRGVVEEL 303
Query: 979 LWFISGSTNAKVLQEKGIRIWDGNASRDYLDSIGLTDREDGDLGPIYGFQWRHFGARYTN 800
LWFISGST+AKVLQEKGI IWDGNASR+YLDSIGL DRE+GDLGP+YGFQWRHFGARYT+
Sbjct: 304 LWFISGSTSAKVLQEKGIHIWDGNASREYLDSIGLKDREEGDLGPVYGFQWRHFGARYTD 363
Query: 799 MHADYTGQGFDQLLDVIEKVKNKPDDRRIILSAWNPADLKLMALPPCHMFAQFYVANGEL 620
MHADYTGQGFDQLLDVI+K+KN P+DRRII+SAWNP+DLKLMALPPCHMFAQFYVANGEL
Sbjct: 364 MHADYTGQGFDQLLDVIDKIKNNPNDRRIIISAWNPSDLKLMALPPCHMFAQFYVANGEL 423
Query: 619 SCQMYQRSADLGLGVPFNIASYALLTCMIAHVCDVVPGDFIHVIGDAHVYKTHVRPLQEQ 440
SCQMYQRSAD+GLGVPFNIASYALLTC+IAHVCD++PGDF+HVIGDAHVY TH+RPLQEQ
Sbjct: 424 SCQMYQRSADMGLGVPFNIASYALLTCIIAHVCDLIPGDFVHVIGDAHVYHTHIRPLQEQ 483
Query: 439 LQRLPKPFPILKINPQKKDIDSFTAADLELIGYYPHQKIEMQMAI 305
L++LPKPFPILKIN +KKDID+F AAD +LIGY PHQKIEM+MA+
Sbjct: 484 LRKLPKPFPILKINSEKKDIDTFVAADFKLIGYDPHQKIEMKMAV 528
>ref|XP_002512938.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
[Ricinus communis] gi|223547949|gb|EEF49441.1|
bifunctional dihydrofolate reductase-thymidylate
synthase, putative [Ricinus communis]
Length = 528
Score = 875 bits (2261), Expect = 0.0
Identities = 423/529 (79%), Positives = 476/529 (89%), Gaps = 6/529 (1%)
Frame = -1
Query: 1873 MAGADIVANLLNGSSN-----PLRTYQVVVAATQTMGIGKDGKLPWNLPSDLKFFKEVTM 1709
MAG D ANL NG++N P RTYQVVVAAT+ MGIGKDGKLPW LPSDLKFFK+VT+
Sbjct: 1 MAG-DTKANLSNGNANIEQHDPRRTYQVVVAATRDMGIGKDGKLPWRLPSDLKFFKDVTL 59
Query: 1708 VTSDPGKRNAVIMGRKTWESIPPEKRPLPGRLNVVLTRSGSFDIATAENVVICGSMTSAL 1529
T+D GK+NAVIMGRKTWESIP E RPLPGRLNVVLTRSGSFDIATAENVV+CGS SAL
Sbjct: 60 TTTDSGKKNAVIMGRKTWESIPLEHRPLPGRLNVVLTRSGSFDIATAENVVMCGSFASAL 119
Query: 1528 ELLAASPYCLSIEKVFVIGGGQILKEALNAPECDAVHITEISTSIECDTFMPPVDHSIYR 1349
ELLAASPYCLSIEKV+VIGGGQIL+EALNAP CDAVHITEI TS +CDTF+P +D SI+
Sbjct: 120 ELLAASPYCLSIEKVYVIGGGQILREALNAPGCDAVHITEIETSFDCDTFIPAIDSSIFH 179
Query: 1348 PWYSSFPLVENNILLSYVSYIRVRQSALESVTFNNGDISNGSN-SVKLEVDKSSSLPKMI 1172
PWY SFP+VENNI S+ +Y+RVR SA+ES ++G S S+ + K +V K S LPKM+
Sbjct: 180 PWYLSFPMVENNIRYSFATYVRVRSSAVESNGHDSGLSSESSSENSKFDVKKFSFLPKMV 239
Query: 1171 FEKHKEYMYLKLVQDIISNGIQKDDRTGTGTLSKFGCQMRFNLRKSFPLLTTKKVFWRGV 992
F++H+E++YL+LVQ+IIS+GI KDDRTGTGTLSKFGCQ+RFNLRK+FPLLTTKKVFWRGV
Sbjct: 240 FDRHEEFLYLRLVQEIISDGILKDDRTGTGTLSKFGCQVRFNLRKTFPLLTTKKVFWRGV 299
Query: 991 VEELLWFISGSTNAKVLQEKGIRIWDGNASRDYLDSIGLTDREDGDLGPIYGFQWRHFGA 812
VEELLWFISGSTNAKVLQEKGI IWDGNASRDYLDSIGL +RE+GDLGP+YGFQWRHFGA
Sbjct: 300 VEELLWFISGSTNAKVLQEKGIHIWDGNASRDYLDSIGLKNREEGDLGPVYGFQWRHFGA 359
Query: 811 RYTNMHADYTGQGFDQLLDVIEKVKNKPDDRRIILSAWNPADLKLMALPPCHMFAQFYVA 632
RYT+MHADYTGQGFDQLLDV+ K+KN PDDRRIILSAWNP+DLKLMALPPCHMFAQFYVA
Sbjct: 360 RYTDMHADYTGQGFDQLLDVVNKIKNNPDDRRIILSAWNPSDLKLMALPPCHMFAQFYVA 419
Query: 631 NGELSCQMYQRSADLGLGVPFNIASYALLTCMIAHVCDVVPGDFIHVIGDAHVYKTHVRP 452
NGELSCQMYQRSAD+GLGVPFNIASY LLTC+IAHVCD+VPGDF+HVIGD HVY+THVRP
Sbjct: 420 NGELSCQMYQRSADMGLGVPFNIASYGLLTCIIAHVCDLVPGDFVHVIGDTHVYRTHVRP 479
Query: 451 LQEQLQRLPKPFPILKINPQKKDIDSFTAADLELIGYYPHQKIEMQMAI 305
LQEQLQ+LPKPFPILKINP+KK+IDSF AAD +LIGY PH KIEM+MA+
Sbjct: 480 LQEQLQKLPKPFPILKINPEKKNIDSFVAADFKLIGYDPHHKIEMKMAV 528
>ref|XP_004148833.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate
synthase-like [Cucumis sativus]
gi|449507353|ref|XP_004163007.1| PREDICTED: bifunctional
dihydrofolate reductase-thymidylate synthase-like
[Cucumis sativus]
Length = 527
Score = 865 bits (2236), Expect = 0.0
Identities = 414/528 (78%), Positives = 468/528 (88%)
Frame = -1
Query: 1888 LSIDRMAGADIVANLLNGSSNPLRTYQVVVAATQTMGIGKDGKLPWNLPSDLKFFKEVTM 1709
++ D + ++ +AN+ N +P RTYQVVVAAT+ +GIGK GKLPW LPSD+KFFK +T+
Sbjct: 1 MAADPLTSSNGIANV-NSPPDPRRTYQVVVAATENLGIGKGGKLPWRLPSDIKFFKNITI 59
Query: 1708 VTSDPGKRNAVIMGRKTWESIPPEKRPLPGRLNVVLTRSGSFDIATAENVVICGSMTSAL 1529
TSDPGKRNAV+MGRKTWES+P E RPLPGRLNVVLTRSGSFDIAT ENV+ICGS+TSAL
Sbjct: 60 TTSDPGKRNAVLMGRKTWESLPAEHRPLPGRLNVVLTRSGSFDIATVENVIICGSITSAL 119
Query: 1528 ELLAASPYCLSIEKVFVIGGGQILKEALNAPECDAVHITEISTSIECDTFMPPVDHSIYR 1349
ELLAASPYCLSIEKVFVIGGG+IL+EA+NAPECDAVHITEI T++ECDTF+P VD SI++
Sbjct: 120 ELLAASPYCLSIEKVFVIGGGEILREAMNAPECDAVHITEIETNVECDTFIPAVDKSIFQ 179
Query: 1348 PWYSSFPLVENNILLSYVSYIRVRQSALESVTFNNGDISNGSNSVKLEVDKSSSLPKMIF 1169
PWYSSFP+VE N+ S+ SY+RVR SA + NNG +S+ K S LPK IF
Sbjct: 180 PWYSSFPVVEKNLRYSFNSYVRVRSSAEPPIDQNNGLVSHNKPDFSNFEAKFSFLPKEIF 239
Query: 1168 EKHKEYMYLKLVQDIISNGIQKDDRTGTGTLSKFGCQMRFNLRKSFPLLTTKKVFWRGVV 989
E+H+EY+YLKLVQ+IIS+GI KDDRTGTGTLSKFGCQMR+NLRK+FPLLTTKKVFWRGVV
Sbjct: 240 ERHEEYLYLKLVQEIISDGIPKDDRTGTGTLSKFGCQMRYNLRKTFPLLTTKKVFWRGVV 299
Query: 988 EELLWFISGSTNAKVLQEKGIRIWDGNASRDYLDSIGLTDREDGDLGPIYGFQWRHFGAR 809
EELLWFISGSTNAKVLQEKGI IWDGNASRDYLDSIGL +RE+GDLGP+YGFQWRHFGAR
Sbjct: 300 EELLWFISGSTNAKVLQEKGIHIWDGNASRDYLDSIGLREREEGDLGPVYGFQWRHFGAR 359
Query: 808 YTNMHADYTGQGFDQLLDVIEKVKNKPDDRRIILSAWNPADLKLMALPPCHMFAQFYVAN 629
YT+MHADYTGQGFDQLLDVI K+KN PDDRRIILSAWNP+DL+LMALPPCHMF+QFYVAN
Sbjct: 360 YTDMHADYTGQGFDQLLDVINKIKNNPDDRRIILSAWNPSDLQLMALPPCHMFSQFYVAN 419
Query: 628 GELSCQMYQRSADLGLGVPFNIASYALLTCMIAHVCDVVPGDFIHVIGDAHVYKTHVRPL 449
GELSCQMYQRSAD+GLGVPFNIASYALLTCMIAHVC + GDFIHVIGDAHVY+THVRPL
Sbjct: 420 GELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCGLARGDFIHVIGDAHVYRTHVRPL 479
Query: 448 QEQLQRLPKPFPILKINPQKKDIDSFTAADLELIGYYPHQKIEMQMAI 305
QEQLQ+LPKPFPILKINP+KKDIDSF A D EL GY PH KI M+MA+
Sbjct: 480 QEQLQKLPKPFPILKINPEKKDIDSFVADDFELTGYDPHVKIAMKMAV 527
>emb|CBI37680.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 860 bits (2223), Expect = 0.0
Identities = 421/548 (76%), Positives = 469/548 (85%), Gaps = 15/548 (2%)
Frame = -1
Query: 1903 SGVCSLSI-----------DRMAGADIVANLLNGSSN----PLRTYQVVVAATQTMGIGK 1769
S +CSLS D + +D V +L NG++N P RTYQVVVAAT+ MGIGK
Sbjct: 85 SWLCSLSFQSTSLSLHWVQDSIMASDTVVSLPNGNANIQPDPQRTYQVVVAATRDMGIGK 144
Query: 1768 DGKLPWNLPSDLKFFKEVTMVTSDPGKRNAVIMGRKTWESIPPEKRPLPGRLNVVLTRSG 1589
DGKLPW LPSD+K FK++TM +D K+NAVIMGRKTWESIP E RPLPGRLNVVLTRSG
Sbjct: 145 DGKLPWRLPSDMKIFKDITMTVADTVKKNAVIMGRKTWESIPLEHRPLPGRLNVVLTRSG 204
Query: 1588 SFDIATAENVVICGSMTSALELLAASPYCLSIEKVFVIGGGQILKEALNAPECDAVHITE 1409
SFDIATAENVVICGSM SALELLAASPYCLSIEKVFVIGGGQIL+EALNAP CDA+HITE
Sbjct: 205 SFDIATAENVVICGSMASALELLAASPYCLSIEKVFVIGGGQILREALNAPGCDAIHITE 264
Query: 1408 ISTSIECDTFMPPVDHSIYRPWYSSFPLVENNILLSYVSYIRVRQSALESVTFNNGDISN 1229
I TS ECDTF+P +D +++PWYSSFPLVENNI S+++Y+RVR
Sbjct: 265 IETSFECDTFIPAIDSLVFQPWYSSFPLVENNIRYSFMTYVRVR---------------- 308
Query: 1228 GSNSVKLEVDKSSSLPKMIFEKHKEYMYLKLVQDIISNGIQKDDRTGTGTLSKFGCQMRF 1049
+ K S LPKMIFE+H+EY+YL+LV+DIISNG+Q+DDRTGTGTLSKFGCQMRF
Sbjct: 309 --------IKKFSFLPKMIFERHEEYIYLRLVEDIISNGVQRDDRTGTGTLSKFGCQMRF 360
Query: 1048 NLRKSFPLLTTKKVFWRGVVEELLWFISGSTNAKVLQEKGIRIWDGNASRDYLDSIGLTD 869
NLRK+FPLLTTKKVFWRGVVEELLWFISGSTNAKVLQEKGI IWDGNASRDYLDSIGL D
Sbjct: 361 NLRKTFPLLTTKKVFWRGVVEELLWFISGSTNAKVLQEKGIHIWDGNASRDYLDSIGLAD 420
Query: 868 REDGDLGPIYGFQWRHFGARYTNMHADYTGQGFDQLLDVIEKVKNKPDDRRIILSAWNPA 689
RE+GDLGPIYGFQWRHFGA Y +MHADYTGQGFDQLLDVI K+KN P+DRRIILSAWNP+
Sbjct: 421 REEGDLGPIYGFQWRHFGASYIDMHADYTGQGFDQLLDVINKIKNNPNDRRIILSAWNPS 480
Query: 688 DLKLMALPPCHMFAQFYVANGELSCQMYQRSADLGLGVPFNIASYALLTCMIAHVCDVVP 509
DLKLMALPPCHMFAQFYV++GELSCQMYQRSAD+GLGVPFNIASYALLTCMIAHVCD+VP
Sbjct: 481 DLKLMALPPCHMFAQFYVSHGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLVP 540
Query: 508 GDFIHVIGDAHVYKTHVRPLQEQLQRLPKPFPILKINPQKKDIDSFTAADLELIGYYPHQ 329
GDFIHVIGD+HVY TH+RPLQEQLQ+LPKPFPILKINPQKK+IDSF AAD +LIGY PHQ
Sbjct: 541 GDFIHVIGDSHVYLTHIRPLQEQLQKLPKPFPILKINPQKKNIDSFVAADFQLIGYDPHQ 600
Query: 328 KIEMQMAI 305
KIEM+MA+
Sbjct: 601 KIEMKMAV 608