BLASTX nr result

ID: Coptis24_contig00021866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021866
         (707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302058.1| predicted protein [Populus trichocarpa] gi|2...   246   4e-63
ref|XP_003554282.1| PREDICTED: poly [ADP-ribose] polymerase 1-li...   244   1e-62
ref|XP_003521279.1| PREDICTED: poly [ADP-ribose] polymerase 1-li...   244   1e-62
ref|XP_003632422.1| PREDICTED: poly [ADP-ribose] polymerase 1-li...   243   4e-62
emb|CBI37089.3| unnamed protein product [Vitis vinifera]              243   4e-62

>ref|XP_002302058.1| predicted protein [Populus trichocarpa] gi|222843784|gb|EEE81331.1|
            predicted protein [Populus trichocarpa]
          Length = 996

 Score =  246 bits (627), Expect = 4e-63
 Identities = 117/137 (85%), Positives = 127/137 (92%)
 Frame = -2

Query: 706  QGLRIAPPEAPTTGYMFGKGVYFADMVSKSAQYCYTDKKNPVGLMLLSEVALGNVCELKK 527
            QGLRIAPPEAPTTGYMFGKGVYFAD+VSKSAQYC+TDKKNPVGLMLLSEVALG V ELKK
Sbjct: 858  QGLRIAPPEAPTTGYMFGKGVYFADLVSKSAQYCFTDKKNPVGLMLLSEVALGEVYELKK 917

Query: 526  ASYMDKPPRGKHSTKGLGKTIPQPSEYVKWRDDVVVPCGKPVSSGVMASELQYNEFIVYD 347
            A+YM+KPP GKHSTKGLGK +P+ S YVKWR+DV+VPCGKPVSS V ASEL YNE+IVY+
Sbjct: 918  ATYMEKPPEGKHSTKGLGKKVPEESGYVKWRNDVIVPCGKPVSSKVKASELMYNEYIVYN 977

Query: 346  TAQVKMQFLLKVRFQHK 296
            TAQVKMQFLLKVRF HK
Sbjct: 978  TAQVKMQFLLKVRFHHK 994


>ref|XP_003554282.1| PREDICTED: poly [ADP-ribose] polymerase 1-like [Glycine max]
          Length = 996

 Score =  244 bits (623), Expect = 1e-62
 Identities = 117/137 (85%), Positives = 124/137 (90%)
 Frame = -2

Query: 706  QGLRIAPPEAPTTGYMFGKGVYFADMVSKSAQYCYTDKKNPVGLMLLSEVALGNVCELKK 527
            QGLRIAPPEAP TGYMFGKGVYFAD+VSKSAQYC+TDKKNPVGLMLLSEVALGNV ELKK
Sbjct: 859  QGLRIAPPEAPATGYMFGKGVYFADLVSKSAQYCFTDKKNPVGLMLLSEVALGNVYELKK 918

Query: 526  ASYMDKPPRGKHSTKGLGKTIPQPSEYVKWRDDVVVPCGKPVSSGVMASELQYNEFIVYD 347
            A YMDKPP GKHSTKGLGK +PQ SEYVKWR +V VPCGKPV S V +SEL YNE+IVY+
Sbjct: 919  AKYMDKPPEGKHSTKGLGKKMPQESEYVKWRGNVTVPCGKPVPSNVKSSELMYNEYIVYN 978

Query: 346  TAQVKMQFLLKVRFQHK 296
            TAQVKMQFLLKVRF HK
Sbjct: 979  TAQVKMQFLLKVRFHHK 995


>ref|XP_003521279.1| PREDICTED: poly [ADP-ribose] polymerase 1-like [Glycine max]
          Length = 997

 Score =  244 bits (623), Expect = 1e-62
 Identities = 117/137 (85%), Positives = 124/137 (90%)
 Frame = -2

Query: 706  QGLRIAPPEAPTTGYMFGKGVYFADMVSKSAQYCYTDKKNPVGLMLLSEVALGNVCELKK 527
            QGLRIAPPEAP TGYMFGKGVYFAD+VSKSAQYC+TDKKNPVGLMLLSEVALGNV ELKK
Sbjct: 860  QGLRIAPPEAPATGYMFGKGVYFADLVSKSAQYCFTDKKNPVGLMLLSEVALGNVYELKK 919

Query: 526  ASYMDKPPRGKHSTKGLGKTIPQPSEYVKWRDDVVVPCGKPVSSGVMASELQYNEFIVYD 347
            A YMDKPP GKHSTKGLGK +PQ SEYVKWR +V VPCGKPV S V +SEL YNE+IVY+
Sbjct: 920  AKYMDKPPEGKHSTKGLGKKMPQESEYVKWRGNVTVPCGKPVPSNVKSSELMYNEYIVYN 979

Query: 346  TAQVKMQFLLKVRFQHK 296
            TAQVKMQFLLKVRF HK
Sbjct: 980  TAQVKMQFLLKVRFHHK 996


>ref|XP_003632422.1| PREDICTED: poly [ADP-ribose] polymerase 1-like isoform 2 [Vitis
            vinifera]
          Length = 992

 Score =  243 bits (619), Expect = 4e-62
 Identities = 116/137 (84%), Positives = 124/137 (90%)
 Frame = -2

Query: 706  QGLRIAPPEAPTTGYMFGKGVYFADMVSKSAQYCYTDKKNPVGLMLLSEVALGNVCELKK 527
            QGLRIAPPEAP TGYMFGKGVYFAD+VSKSAQYCYTD+KNPVGLMLLSEVALG V EL+K
Sbjct: 855  QGLRIAPPEAPATGYMFGKGVYFADLVSKSAQYCYTDRKNPVGLMLLSEVALGEVYELRK 914

Query: 526  ASYMDKPPRGKHSTKGLGKTIPQPSEYVKWRDDVVVPCGKPVSSGVMASELQYNEFIVYD 347
            A YMDKPP GKHSTKGLGK  PQ SEYVKWRD+VVVPCGKPV S V ++EL YNE+IVY+
Sbjct: 915  AMYMDKPPEGKHSTKGLGKKKPQDSEYVKWRDEVVVPCGKPVPSNVKSTELMYNEYIVYN 974

Query: 346  TAQVKMQFLLKVRFQHK 296
            TAQVKMQFLLKVRF HK
Sbjct: 975  TAQVKMQFLLKVRFHHK 991


>emb|CBI37089.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  243 bits (619), Expect = 4e-62
 Identities = 116/137 (84%), Positives = 124/137 (90%)
 Frame = -2

Query: 706  QGLRIAPPEAPTTGYMFGKGVYFADMVSKSAQYCYTDKKNPVGLMLLSEVALGNVCELKK 527
            QGLRIAPPEAP TGYMFGKGVYFAD+VSKSAQYCYTD+KNPVGLMLLSEVALG V EL+K
Sbjct: 859  QGLRIAPPEAPATGYMFGKGVYFADLVSKSAQYCYTDRKNPVGLMLLSEVALGEVYELRK 918

Query: 526  ASYMDKPPRGKHSTKGLGKTIPQPSEYVKWRDDVVVPCGKPVSSGVMASELQYNEFIVYD 347
            A YMDKPP GKHSTKGLGK  PQ SEYVKWRD+VVVPCGKPV S V ++EL YNE+IVY+
Sbjct: 919  AMYMDKPPEGKHSTKGLGKKKPQDSEYVKWRDEVVVPCGKPVPSNVKSTELMYNEYIVYN 978

Query: 346  TAQVKMQFLLKVRFQHK 296
            TAQVKMQFLLKVRF HK
Sbjct: 979  TAQVKMQFLLKVRFHHK 995


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