BLASTX nr result

ID: Coptis24_contig00021864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021864
         (823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23563.3| unnamed protein product [Vitis vinifera]              186   7e-45
ref|XP_002321219.1| predicted protein [Populus trichocarpa] gi|2...   181   1e-43
ref|XP_002302835.1| predicted protein [Populus trichocarpa] gi|2...   181   2e-43
emb|CAN71628.1| hypothetical protein VITISV_015578 [Vitis vinifera]   179   9e-43
ref|XP_002524569.1| conserved hypothetical protein [Ricinus comm...   177   3e-42

>emb|CBI23563.3| unnamed protein product [Vitis vinifera]
          Length = 165

 Score =  186 bits (471), Expect = 7e-45
 Identities = 98/154 (63%), Positives = 105/154 (68%)
 Frame = -2

Query: 555 RICVKCSAVQESSPSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLTQLMEEDVIPSLST 376
           R  + CSAVQESS                                L Q+MEEDVIPSL +
Sbjct: 12  RRIIACSAVQESSTPTVAAETKEVKPAQEKGPAKPKPPAKAPVKPLPQMMEEDVIPSLKS 71

Query: 375 TFEAQNDLSEIELSFGDNRLEGSFVKNATRYSFWVFFPDGVLTGPKGFSLSSYGSEVSTV 196
             EAQ+DLSEIELSF DNRLEGSF K    YSFW FFP+GVLTGPKGFSLSSYGS  STV
Sbjct: 72  ILEAQDDLSEIELSFQDNRLEGSFQKKGIPYSFWAFFPNGVLTGPKGFSLSSYGSGSSTV 131

Query: 195 EPFLIDEKKITGKHVVFWVEKRLAAQGILPVWKE 94
           EPFLIDEK+IT KHVVFWVEKRLAAQGI+PVWKE
Sbjct: 132 EPFLIDEKRITAKHVVFWVEKRLAAQGIIPVWKE 165


>ref|XP_002321219.1| predicted protein [Populus trichocarpa] gi|222861992|gb|EEE99534.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  181 bits (460), Expect = 1e-43
 Identities = 97/150 (64%), Positives = 106/150 (70%)
 Frame = -2

Query: 546 VKCSAVQESSPSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLTQLMEEDVIPSLSTTFE 367
           + CSAVQESS S                              L QLMEEDVIPSL  T E
Sbjct: 47  ITCSAVQESSTSTVAADATEVKPVEKKAPAKPKKAPAKP---LAQLMEEDVIPSLKATLE 103

Query: 366 AQNDLSEIELSFGDNRLEGSFVKNATRYSFWVFFPDGVLTGPKGFSLSSYGSEVSTVEPF 187
           AQ+D++E+ELSF DNRLEGSF++  T YSFW FFPDG LTGPKGFSLSSYGS VSTVEPF
Sbjct: 104 AQDDITELELSFTDNRLEGSFLQKGTPYSFWAFFPDG-LTGPKGFSLSSYGSGVSTVEPF 162

Query: 186 LIDEKKITGKHVVFWVEKRLAAQGILPVWK 97
           LIDEKKIT KH+VFWVEKRLAAQGI+PVWK
Sbjct: 163 LIDEKKITEKHIVFWVEKRLAAQGIIPVWK 192


>ref|XP_002302835.1| predicted protein [Populus trichocarpa] gi|222844561|gb|EEE82108.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  181 bits (459), Expect = 2e-43
 Identities = 97/158 (61%), Positives = 108/158 (68%)
 Frame = -2

Query: 570 KGKMPRICVKCSAVQESSPSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLTQLMEEDVI 391
           K  +PR  +  SAVQESS S                              L+QLMEEDVI
Sbjct: 4   KSVIPRRRITFSAVQESSASTGKLPHSCQLKRRHRQSPKKRPAKP-----LSQLMEEDVI 58

Query: 390 PSLSTTFEAQNDLSEIELSFGDNRLEGSFVKNATRYSFWVFFPDGVLTGPKGFSLSSYGS 211
           PSL  T EAQ+ ++E+EL F D RLEGSF+K  T YSFW FFPDGVLTGPKGFSLSSYGS
Sbjct: 59  PSLKATLEAQDHITELELPFEDKRLEGSFLKKGTPYSFWAFFPDGVLTGPKGFSLSSYGS 118

Query: 210 EVSTVEPFLIDEKKITGKHVVFWVEKRLAAQGILPVWK 97
            VSTVEPFLIDEKKIT KH+VFWVEKRLAAQGI+PVW+
Sbjct: 119 GVSTVEPFLIDEKKITEKHIVFWVEKRLAAQGIIPVWR 156


>emb|CAN71628.1| hypothetical protein VITISV_015578 [Vitis vinifera]
          Length = 220

 Score =  179 bits (453), Expect = 9e-43
 Identities = 88/109 (80%), Positives = 94/109 (86%)
 Frame = -2

Query: 420 LTQLMEEDVIPSLSTTFEAQNDLSEIELSFGDNRLEGSFVKNATRYSFWVFFPDGVLTGP 241
           L Q+MEEDVIPSL +  EAQ+DLSEIELSF DNRLEGSF K    YSFW FF +GVLTGP
Sbjct: 112 LPQMMEEDVIPSLKSILEAQDDLSEIELSFQDNRLEGSFQKKGIPYSFWAFFXNGVLTGP 171

Query: 240 KGFSLSSYGSEVSTVEPFLIDEKKITGKHVVFWVEKRLAAQGILPVWKE 94
           KGFSLSSYGS  STVEPFLIDEK+IT KHVVFWVEKRLAAQGI+PVWKE
Sbjct: 172 KGFSLSSYGSGSSTVEPFLIDEKRITAKHVVFWVEKRLAAQGIIPVWKE 220


>ref|XP_002524569.1| conserved hypothetical protein [Ricinus communis]
           gi|223536122|gb|EEF37777.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 202

 Score =  177 bits (449), Expect = 3e-42
 Identities = 95/166 (57%), Positives = 104/166 (62%), Gaps = 7/166 (4%)
 Frame = -2

Query: 570 KGKMPRICVKCSAVQESSPS-------IXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLTQ 412
           K  + R  + CSAVQESS S       +                             L Q
Sbjct: 37  KSAISRRSITCSAVQESSTSTSTSTSTVAADTKEVKKAEEKTPAAKPKPAAKAPVKPLPQ 96

Query: 411 LMEEDVIPSLSTTFEAQNDLSEIELSFGDNRLEGSFVKNATRYSFWVFFPDGVLTGPKGF 232
           LMEEDVIPSL   FE + D++E+ELSF DNRLEGSF K    YSFW FFP GVLTG KGF
Sbjct: 97  LMEEDVIPSLKAIFETEQDITELELSFNDNRLEGSFRKKGNPYSFWAFFPSGVLTGTKGF 156

Query: 231 SLSSYGSEVSTVEPFLIDEKKITGKHVVFWVEKRLAAQGILPVWKE 94
           SLSSYG   STVEPFLIDEKKIT KH+VFWVEKRLAAQGI+PVWKE
Sbjct: 157 SLSSYGLGASTVEPFLIDEKKITAKHIVFWVEKRLAAQGIIPVWKE 202