BLASTX nr result

ID: Coptis24_contig00021858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021858
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332700.1| predicted protein [Populus trichocarpa] gi|2...   220   1e-55
ref|XP_002264669.2| PREDICTED: WD repeat-containing protein WRAP...   219   2e-55
emb|CBI38624.3| unnamed protein product [Vitis vinifera]              219   2e-55
ref|XP_002297923.1| predicted protein [Populus trichocarpa] gi|2...   218   3e-55
ref|XP_003556319.1| PREDICTED: WD repeat-containing protein WRAP...   215   3e-54

>ref|XP_002332700.1| predicted protein [Populus trichocarpa] gi|222832954|gb|EEE71431.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score =  220 bits (560), Expect = 1e-55
 Identities = 97/122 (79%), Positives = 110/122 (90%)
 Frame = -2

Query: 497 GLLSWSKDSRYLFTRNDSMPTVLWIWDIHHLELAAILVQKEPIRAAAWDPTYPRLVICTS 318
           GL+SWSKDSRY++TRNDSMPT LWIWDIHHLELAAILVQK+PIRAAAWDPT PRLV+CT 
Sbjct: 168 GLMSWSKDSRYIYTRNDSMPTALWIWDIHHLELAAILVQKDPIRAAAWDPTCPRLVLCTG 227

Query: 317 SNHLYMWTASGAYCVSIPLPQFTITDLKWNIDGSCLLLKDRESFCCATVPMLPDSGDESS 138
           S+HLYMWT SGAYCVS PLPQF I DLKWN DGSCLLLKD++SFCCA V ++P+S + SS
Sbjct: 228 SSHLYMWTPSGAYCVSNPLPQFNINDLKWNSDGSCLLLKDKDSFCCAAVSLMPESSEYSS 287

Query: 137 DE 132
           D+
Sbjct: 288 DD 289


>ref|XP_002264669.2| PREDICTED: WD repeat-containing protein WRAP73 [Vitis vinifera]
          Length = 460

 Score =  219 bits (558), Expect = 2e-55
 Identities = 97/122 (79%), Positives = 111/122 (90%)
 Frame = -2

Query: 497 GLLSWSKDSRYLFTRNDSMPTVLWIWDIHHLELAAILVQKEPIRAAAWDPTYPRLVICTS 318
           GL+SWSKDSRY+ TRNDSMPT +WIWDIH LELAAILVQK+PIRAAAWDPT PRLV+CT 
Sbjct: 339 GLMSWSKDSRYICTRNDSMPTAVWIWDIHRLELAAILVQKDPIRAAAWDPTCPRLVLCTG 398

Query: 317 SNHLYMWTASGAYCVSIPLPQFTITDLKWNIDGSCLLLKDRESFCCATVPMLPDSGDESS 138
           S+HLYMWT SGAYCVS PLPQF++TDLKWN DGSCLLLKD+ESFCCA +P+LP+S + SS
Sbjct: 399 SSHLYMWTPSGAYCVSNPLPQFSVTDLKWNSDGSCLLLKDKESFCCAAMPILPESSEYSS 458

Query: 137 DE 132
           D+
Sbjct: 459 DD 460


>emb|CBI38624.3| unnamed protein product [Vitis vinifera]
          Length = 458

 Score =  219 bits (558), Expect = 2e-55
 Identities = 97/122 (79%), Positives = 111/122 (90%)
 Frame = -2

Query: 497 GLLSWSKDSRYLFTRNDSMPTVLWIWDIHHLELAAILVQKEPIRAAAWDPTYPRLVICTS 318
           GL+SWSKDSRY+ TRNDSMPT +WIWDIH LELAAILVQK+PIRAAAWDPT PRLV+CT 
Sbjct: 337 GLMSWSKDSRYICTRNDSMPTAVWIWDIHRLELAAILVQKDPIRAAAWDPTCPRLVLCTG 396

Query: 317 SNHLYMWTASGAYCVSIPLPQFTITDLKWNIDGSCLLLKDRESFCCATVPMLPDSGDESS 138
           S+HLYMWT SGAYCVS PLPQF++TDLKWN DGSCLLLKD+ESFCCA +P+LP+S + SS
Sbjct: 397 SSHLYMWTPSGAYCVSNPLPQFSVTDLKWNSDGSCLLLKDKESFCCAAMPILPESSEYSS 456

Query: 137 DE 132
           D+
Sbjct: 457 DD 458


>ref|XP_002297923.1| predicted protein [Populus trichocarpa] gi|222845181|gb|EEE82728.1|
           predicted protein [Populus trichocarpa]
          Length = 338

 Score =  218 bits (556), Expect = 3e-55
 Identities = 98/122 (80%), Positives = 110/122 (90%)
 Frame = -2

Query: 497 GLLSWSKDSRYLFTRNDSMPTVLWIWDIHHLELAAILVQKEPIRAAAWDPTYPRLVICTS 318
           GL+SWSKDSRY++TRNDSMPT LWIWDI HLELAAILVQK+PIRAAAWDPT  RLV+CT 
Sbjct: 217 GLMSWSKDSRYIYTRNDSMPTALWIWDICHLELAAILVQKDPIRAAAWDPTCTRLVLCTG 276

Query: 317 SNHLYMWTASGAYCVSIPLPQFTITDLKWNIDGSCLLLKDRESFCCATVPMLPDSGDESS 138
           S+HLYMWT SGAYCVS PLPQF ITDLKWN DGSCLLLKD+ESFCCA+VP+ P+S + SS
Sbjct: 277 SSHLYMWTPSGAYCVSNPLPQFNITDLKWNSDGSCLLLKDKESFCCASVPLFPESSEYSS 336

Query: 137 DE 132
           D+
Sbjct: 337 DD 338


>ref|XP_003556319.1| PREDICTED: WD repeat-containing protein WRAP73-like [Glycine max]
          Length = 458

 Score =  215 bits (547), Expect = 3e-54
 Identities = 96/122 (78%), Positives = 107/122 (87%)
 Frame = -2

Query: 497 GLLSWSKDSRYLFTRNDSMPTVLWIWDIHHLELAAILVQKEPIRAAAWDPTYPRLVICTS 318
           G+LSWS DS+Y+ TRNDSMPTVLWIWDI HLELAAILV K+PIRAAAWDP   RLV+CT 
Sbjct: 337 GILSWSNDSQYICTRNDSMPTVLWIWDIRHLELAAILVHKDPIRAAAWDPACTRLVLCTG 396

Query: 317 SNHLYMWTASGAYCVSIPLPQFTITDLKWNIDGSCLLLKDRESFCCATVPMLPDSGDESS 138
           S HLYMWT SGAYCV +PLPQFTITDLKWN DGSCLLLKD+ESFCCA VP+LP+S + SS
Sbjct: 397 STHLYMWTPSGAYCVHVPLPQFTITDLKWNSDGSCLLLKDKESFCCAAVPLLPESSEYSS 456

Query: 137 DE 132
           D+
Sbjct: 457 DD 458


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